RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 MMP10P09238 476 aa27.58■■■□□ 2.01
LPCAT3-210ENST00000540090 HSPA6P17066 643 aa27.58■■■□□ 2.01
LPCAT3-210ENST00000540090 TIMELESSQ9UNS1 1208 aa27.58■■■□□ 2.01
LPCAT3-210ENST00000540090 PLEKHG2Q9H7P9 1386 aa27.58■■■□□ 2.01
LPCAT3-210ENST00000540090 TRAPPC3LQ5T215 181 aa27.57■■■□□ 2
LPCAT3-210ENST00000540090 ERVV-2B6SEH9 535 aa27.56■■■□□ 2
LPCAT3-210ENST00000540090 SLC4A9Q96Q91 983 aa27.56■■■□□ 2
LPCAT3-210ENST00000540090 RTCBQ9Y3I0 505 aaKnown RBP27.56■■■□□ 2
LPCAT3-210ENST00000540090 NLGN1Q8N2Q7 840 aa27.55■■■□□ 2
LPCAT3-210ENST00000540090 TNNT2P45379 298 aaPredicted RBP27.54■■■□□ 2
LPCAT3-210ENST00000540090 TGFB2P61812 414 aa27.54■■■□□ 2
LPCAT3-210ENST00000540090 TRIM26Q12899 539 aaPredicted RBP27.54■■■□□ 2
LPCAT3-210ENST00000540090 RC3H1Q5TC82 1133 aaKnown RBP27.54■■■□□ 2
LPCAT3-210ENST00000540090 KDRP35968 1356 aa27.53■■■□□ 2
LPCAT3-210ENST00000540090 KIF3CO14782 793 aa27.52■■■□□ 2
LPCAT3-210ENST00000540090 HSP90AB1P08238 724 aaKnown RBP27.52■■■□□ 2
LPCAT3-210ENST00000540090 ARHGEF1Q92888 912 aaKnown RBP27.52■■■□□ 2
LPCAT3-210ENST00000540090 DCAF5Q96JK2 942 aa27.52■■■□□ 2
LPCAT3-210ENST00000540090 ADRA2BP18089 450 aa27.51■■□□□ 1.99
LPCAT3-210ENST00000540090 RBM42Q9BTD8 480 aaKnown RBP27.51■■□□□ 1.99
LPCAT3-210ENST00000540090 PXDNLA1KZ92 1463 aa27.5■■□□□ 1.99
LPCAT3-210ENST00000540090 PLEKHO1Q53GL0 409 aaPredicted RBP27.49■■□□□ 1.99
LPCAT3-210ENST00000540090 POLR3GLQ9BT43 218 aa27.49■■□□□ 1.99
LPCAT3-210ENST00000540090 CNTNAP4Q9C0A0 1308 aa27.48■■□□□ 1.99
LPCAT3-210ENST00000540090 A0A0G2JLW4 131 aa27.48■■□□□ 1.99
LPCAT3-210ENST00000540090 RPS6KA4O75676 772 aa27.48■■□□□ 1.99
LPCAT3-210ENST00000540090 GYS1P13807 737 aa27.47■■□□□ 1.99
LPCAT3-210ENST00000540090 BCS1LQ9Y276 419 aa27.47■■□□□ 1.99
LPCAT3-210ENST00000540090 CICQ96RK0 1608 aaPredicted RBP27.46■■□□□ 1.99
LPCAT3-210ENST00000540090 RFC4P35249 363 aa27.46■■□□□ 1.99
LPCAT3-210ENST00000540090 AMOTQ4VCS5 1084 aa27.46■■□□□ 1.99
LPCAT3-210ENST00000540090 CCDC87Q9NVE4 849 aa27.46■■□□□ 1.99
LPCAT3-210ENST00000540090 CABP4P57796 275 aa27.45■■□□□ 1.98
LPCAT3-210ENST00000540090 C10orf71Q711Q0 1435 aa27.44■■□□□ 1.98
LPCAT3-210ENST00000540090 ZNF530Q6P9A1 599 aaPredicted RBP27.44■■□□□ 1.98
LPCAT3-210ENST00000540090 DPEP1P16444 411 aa27.43■■□□□ 1.98
LPCAT3-210ENST00000540090 PANK3Q9H999 370 aa27.43■■□□□ 1.98
LPCAT3-210ENST00000540090 KDM6AO15550 1401 aaPredicted RBP27.42■■□□□ 1.98
LPCAT3-210ENST00000540090 KIF13BQ9NQT8 1826 aa27.42■■□□□ 1.98
LPCAT3-210ENST00000540090 MTHFSP49914 203 aa27.42■■□□□ 1.98
LPCAT3-210ENST00000540090 ARHGAP27Q6ZUM4 889 aa27.42■■□□□ 1.98
LPCAT3-210ENST00000540090 PARP3Q9Y6F1 533 aa27.42■■□□□ 1.98
LPCAT3-210ENST00000540090 ZNF831Q5JPB2 1677 aa27.42■■□□□ 1.98
LPCAT3-210ENST00000540090 TOMM70O94826 608 aa27.39■■□□□ 1.98
LPCAT3-210ENST00000540090 FCHSD2O94868 740 aa27.39■■□□□ 1.98
LPCAT3-210ENST00000540090 KCNA3P22001 575 aa27.39■■□□□ 1.98
LPCAT3-210ENST00000540090 KIAA1551Q9HCM1 1747 aa27.38■■□□□ 1.97
LPCAT3-210ENST00000540090 PTCD1O75127 700 aaKnown RBP27.38■■□□□ 1.97
LPCAT3-210ENST00000540090 AEBP1Q8IUX7 1158 aa27.38■■□□□ 1.97
LPCAT3-210ENST00000540090 NFATC2IPQ8NCF5 419 aa27.38■■□□□ 1.97
LPCAT3-210ENST00000540090 C1orf141Q5JVX7 400 aa27.37■■□□□ 1.97
LPCAT3-210ENST00000540090 CLSPNQ9HAW4 1339 aa27.37■■□□□ 1.97
LPCAT3-210ENST00000540090 CRKLP46109 303 aaKnown RBP27.36■■□□□ 1.97
LPCAT3-210ENST00000540090 APLP1P51693 650 aa27.36■■□□□ 1.97
LPCAT3-210ENST00000540090 N4BP2Q86UW6 1770 aaPredicted RBP27.35■■□□□ 1.97
LPCAT3-210ENST00000540090 EIF4G2P78344 907 aaKnown RBP eCLIP27.35■■□□□ 1.97
LPCAT3-210ENST00000540090 C4AP0C0L4 1744 aa27.35■■□□□ 1.97
LPCAT3-210ENST00000540090 COL5A3P25940 1745 aaPredicted RBP27.34■■□□□ 1.97
LPCAT3-210ENST00000540090 MORC1Q86VD1 984 aa27.34■■□□□ 1.97
LPCAT3-210ENST00000540090 PIM2Q9P1W9 311 aa27.34■■□□□ 1.97
LPCAT3-210ENST00000540090 FKBP8Q14318 412 aa27.33■■□□□ 1.97
LPCAT3-210ENST00000540090 SULT6B1Q6IMI4 303 aa27.33■■□□□ 1.97
LPCAT3-210ENST00000540090 SRP68Q9UHB9 627 aaKnown RBP27.33■■□□□ 1.97
LPCAT3-210ENST00000540090 MYH14Q7Z406 1995 aaKnown RBP27.33■■□□□ 1.97
LPCAT3-210ENST00000540090 HSPA5P11021 654 aaKnown RBP27.32■■□□□ 1.96
LPCAT3-210ENST00000540090 NMRK2Q9NPI5 230 aa27.32■■□□□ 1.96
LPCAT3-210ENST00000540090 C9orf131Q5VYM1 1079 aa27.31■■□□□ 1.96
LPCAT3-210ENST00000540090 DNAJC5GQ8N7S2 189 aa27.31■■□□□ 1.96
LPCAT3-210ENST00000540090 USP42Q9H9J4 1324 aaKnown RBP27.31■■□□□ 1.96
LPCAT3-210ENST00000540090 DDR1Q08345 913 aa27.3■■□□□ 1.96
LPCAT3-210ENST00000540090 INTS5Q6P9B9 1019 aaKnown RBP27.3■■□□□ 1.96
LPCAT3-210ENST00000540090 IL13P35225 146 aa27.29■■□□□ 1.96
LPCAT3-210ENST00000540090 DALRD3Q5D0E6 543 aaKnown RBP27.29■■□□□ 1.96
LPCAT3-210ENST00000540090 TM4SF1P30408 202 aa27.27■■□□□ 1.96
LPCAT3-210ENST00000540090 POLRMTO00411 1230 aaKnown RBP27.25■■□□□ 1.95
LPCAT3-210ENST00000540090 AKAP4Q5JQC9 854 aa27.25■■□□□ 1.95
LPCAT3-210ENST00000540090 RBM46Q8TBY0 533 aaKnown RBP27.25■■□□□ 1.95
LPCAT3-210ENST00000540090 PCGF6Q9BYE7 350 aa27.25■■□□□ 1.95
LPCAT3-210ENST00000540090 BRCA1P38398 1863 aaKnown RBP27.25■■□□□ 1.95
LPCAT3-210ENST00000540090 CHRNA5P30532 468 aa27.24■■□□□ 1.95
LPCAT3-210ENST00000540090 KNSTRNQ9Y448 316 aa27.24■■□□□ 1.95
LPCAT3-210ENST00000540090 DNAJC10Q8IXB1 793 aa27.23■■□□□ 1.95
LPCAT3-210ENST00000540090 SLC52A2Q9HAB3 445 aa27.23■■□□□ 1.95
LPCAT3-210ENST00000540090 ZPR1O75312 459 aa27.22■■□□□ 1.95
LPCAT3-210ENST00000540090 LGR6Q9HBX8 967 aa27.22■■□□□ 1.95
LPCAT3-210ENST00000540090 SOS1Q07889 1333 aaPredicted RBP27.2■■□□□ 1.95
LPCAT3-210ENST00000540090 KDM2BQ8NHM5 1336 aa27.2■■□□□ 1.95
LPCAT3-210ENST00000540090 USPL1Q5W0Q7 1092 aa27.2■■□□□ 1.94
LPCAT3-210ENST00000540090 C16orf71Q8IYS4 520 aaPredicted RBP27.2■■□□□ 1.94
LPCAT3-210ENST00000540090 RNF181Q9P0P0 153 aa27.2■■□□□ 1.94
LPCAT3-210ENST00000540090 ARFGEF1Q9Y6D6 1849 aa27.19■■□□□ 1.94
LPCAT3-210ENST00000540090 CYP19A1P11511 503 aaPredicted RBP27.19■■□□□ 1.94
LPCAT3-210ENST00000540090 TJP1Q07157 1748 aa27.19■■□□□ 1.94
LPCAT3-210ENST00000540090 FSTL1Q12841 308 aa27.18■■□□□ 1.94
LPCAT3-210ENST00000540090 AMER1Q5JTC6 1135 aaPredicted RBP27.18■■□□□ 1.94
LPCAT3-210ENST00000540090 RNMTO43148 476 aaKnown RBP27.17■■□□□ 1.94
LPCAT3-210ENST00000540090 NARFQ9UHQ1 456 aa27.17■■□□□ 1.94
LPCAT3-210ENST00000540090 SLC39A6Q13433 755 aa27.16■■□□□ 1.94
LPCAT3-210ENST00000540090 NFIXQ14938 502 aa27.16■■□□□ 1.94
LPCAT3-210ENST00000540090 RRAGCQ9HB90 399 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 197.8 ms