RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 ASAP1Q9ULH1 1129 aa11.22□□□□□ -0.61
CD4-209ENST00000539492 VIRMAQ69YN4 1812 aaKnown RBP11.21□□□□□ -0.61
CD4-209ENST00000539492 KDRP35968 1356 aa11.21□□□□□ -0.61
CD4-209ENST00000539492 GNPATO15228 680 aa11.21□□□□□ -0.61
CD4-209ENST00000539492 ATP6V1AP38606 617 aa11.21□□□□□ -0.61
CD4-209ENST00000539492 ITPK1Q13572 414 aa11.21□□□□□ -0.61
CD4-209ENST00000539492 EIF4A2Q14240 407 aaKnown RBP11.21□□□□□ -0.61
CD4-209ENST00000539492 SMIM5Q71RC9 77 aa11.21□□□□□ -0.61
CD4-209ENST00000539492 GPBP1L1Q9HC44 474 aaPredicted RBP11.21□□□□□ -0.61
CD4-209ENST00000539492 C4AP0C0L4 1744 aa11.21□□□□□ -0.62
CD4-209ENST00000539492 CLSPNQ9HAW4 1339 aa11.2□□□□□ -0.62
CD4-209ENST00000539492 ATG3Q9NT62 314 aa11.2□□□□□ -0.62
CD4-209ENST00000539492 ARFGEF1Q9Y6D6 1849 aa11.19□□□□□ -0.62
CD4-209ENST00000539492 HSP90AB1P08238 724 aaKnown RBP11.19□□□□□ -0.62
CD4-209ENST00000539492 POLR3GLQ9BT43 218 aa11.19□□□□□ -0.62
CD4-209ENST00000539492 SCN11AQ9UI33 1791 aa11.18□□□□□ -0.62
CD4-209ENST00000539492 ERVV-2B6SEH9 535 aa11.18□□□□□ -0.62
CD4-209ENST00000539492 MMP10P09238 476 aa11.18□□□□□ -0.62
CD4-209ENST00000539492 TNNT2P45379 298 aaPredicted RBP11.18□□□□□ -0.62
CD4-209ENST00000539492 PXDNLA1KZ92 1463 aa11.18□□□□□ -0.62
CD4-209ENST00000539492 ADRA2BP18089 450 aa11.17□□□□□ -0.62
CD4-209ENST00000539492 DCAF5Q96JK2 942 aa11.17□□□□□ -0.62
CD4-209ENST00000539492 WWC3Q9ULE0 1092 aa11.17□□□□□ -0.62
CD4-209ENST00000539492 RTCBQ9Y3I0 505 aaKnown RBP11.17□□□□□ -0.62
CD4-209ENST00000539492 KDM6AO15550 1401 aaPredicted RBP11.17□□□□□ -0.62
CD4-209ENST00000539492 C10orf71Q711Q0 1435 aa11.17□□□□□ -0.62
CD4-209ENST00000539492 CNTNAP4Q9C0A0 1308 aa11.16□□□□□ -0.62
CD4-209ENST00000539492 PLEKHO1Q53GL0 409 aaPredicted RBP11.16□□□□□ -0.62
CD4-209ENST00000539492 TRAPPC3LQ5T215 181 aa11.16□□□□□ -0.62
CD4-209ENST00000539492 RC3H1Q5TC82 1133 aaKnown RBP11.16□□□□□ -0.62
CD4-209ENST00000539492 ZNF530Q6P9A1 599 aaPredicted RBP11.16□□□□□ -0.62
CD4-209ENST00000539492 ZNF526Q8TF50 670 aaPredicted RBP11.16□□□□□ -0.62
CD4-209ENST00000539492 TJP1Q07157 1748 aa11.15□□□□□ -0.62
CD4-209ENST00000539492 TGFB2P61812 414 aa11.15□□□□□ -0.62
CD4-209ENST00000539492 EIF4G2P78344 907 aaKnown RBP eCLIP11.15□□□□□ -0.62
CD4-209ENST00000539492 AMOTQ4VCS5 1084 aa11.15□□□□□ -0.62
CD4-209ENST00000539492 NLGN1Q8N2Q7 840 aa11.15□□□□□ -0.62
CD4-209ENST00000539492 SLC4A9Q96Q91 983 aa11.15□□□□□ -0.62
CD4-209ENST00000539492 RBM42Q9BTD8 480 aaKnown RBP11.15□□□□□ -0.62
CD4-209ENST00000539492 HSPA6P17066 643 aa11.14□□□□□ -0.63
CD4-209ENST00000539492 ARHGEF1Q92888 912 aaKnown RBP11.14□□□□□ -0.63
CD4-209ENST00000539492 PANK3Q9H999 370 aa11.14□□□□□ -0.63
CD4-209ENST00000539492 CCDC87Q9NVE4 849 aa11.14□□□□□ -0.63
CD4-209ENST00000539492 SBF1O95248 1867 aa11.14□□□□□ -0.63
CD4-209ENST00000539492 RPS6KA4O75676 772 aa11.13□□□□□ -0.63
CD4-209ENST00000539492 GYS1P13807 737 aa11.13□□□□□ -0.63
CD4-209ENST00000539492 RFC4P35249 363 aa11.13□□□□□ -0.63
CD4-209ENST00000539492 CABP4P57796 275 aa11.13□□□□□ -0.63
CD4-209ENST00000539492 C1orf141Q5JVX7 400 aa11.13□□□□□ -0.63
CD4-209ENST00000539492 KIF3CO14782 793 aa11.12□□□□□ -0.63
CD4-209ENST00000539492 HSPA5P11021 654 aaKnown RBP11.12□□□□□ -0.63
CD4-209ENST00000539492 MTHFSP49914 203 aa11.12□□□□□ -0.63
CD4-209ENST00000539492 AEBP1Q8IUX7 1158 aa11.12□□□□□ -0.63
CD4-209ENST00000539492 BCS1LQ9Y276 419 aa11.12□□□□□ -0.63
CD4-209ENST00000539492 PARP3Q9Y6F1 533 aa11.12□□□□□ -0.63
CD4-209ENST00000539492 AFDNP55196 1824 aaKnown RBP11.12□□□□□ -0.63
CD4-209ENST00000539492 ADAMTS7Q9UKP4 1686 aa11.11□□□□□ -0.63
CD4-209ENST00000539492 A0A0G2JLW4 131 aa11.11□□□□□ -0.63
CD4-209ENST00000539492 MORC1Q86VD1 984 aa11.11□□□□□ -0.63
CD4-209ENST00000539492 PCGF6Q9BYE7 350 aa11.11□□□□□ -0.63
CD4-209ENST00000539492 DPEP1P16444 411 aa11.1□□□□□ -0.63
CD4-209ENST00000539492 CRKLP46109 303 aaKnown RBP11.1□□□□□ -0.63
CD4-209ENST00000539492 CCDC88AQ3V6T2 1871 aa11.1□□□□□ -0.63
CD4-209ENST00000539492 MRC1P22897 1456 aa11.09□□□□□ -0.63
CD4-209ENST00000539492 PTCD1O75127 700 aaKnown RBP11.09□□□□□ -0.63
CD4-209ENST00000539492 FCHSD2O94868 740 aa11.09□□□□□ -0.63
CD4-209ENST00000539492 IFFO2Q5TF58 517 aa11.09□□□□□ -0.63
CD4-209ENST00000539492 SULT6B1Q6IMI4 303 aa11.09□□□□□ -0.63
CD4-209ENST00000539492 ARHGAP27Q6ZUM4 889 aa11.09□□□□□ -0.63
CD4-209ENST00000539492 NFATC2IPQ8NCF5 419 aa11.09□□□□□ -0.63
CD4-209ENST00000539492 KNSTRNQ9Y448 316 aa11.09□□□□□ -0.63
CD4-209ENST00000539492 USP42Q9H9J4 1324 aaKnown RBP11.09□□□□□ -0.63
CD4-209ENST00000539492 DLEC1Q9Y238 1755 aa11.08□□□□□ -0.64
CD4-209ENST00000539492 IL13P35225 146 aa11.08□□□□□ -0.64
CD4-209ENST00000539492 UBR2Q8IWV8 1755 aa11.08□□□□□ -0.64
CD4-209ENST00000539492 WDR90Q96KV7 1748 aa11.07□□□□□ -0.64
CD4-209ENST00000539492 NRXN2Q9P2S2 1712 aa11.07□□□□□ -0.64
CD4-209ENST00000539492 KCNA3P22001 575 aa11.07□□□□□ -0.64
CD4-209ENST00000539492 DDR1Q08345 913 aa11.07□□□□□ -0.64
CD4-209ENST00000539492 FKBP8Q14318 412 aa11.07□□□□□ -0.64
CD4-209ENST00000539492 AKAP4Q5JQC9 854 aa11.07□□□□□ -0.64
CD4-209ENST00000539492 PIM2Q9P1W9 311 aa11.07□□□□□ -0.64
CD4-209ENST00000539492 SRP68Q9UHB9 627 aaKnown RBP11.07□□□□□ -0.64
CD4-209ENST00000539492 TNRC6CQ9HCJ0 1690 aaKnown RBP11.07□□□□□ -0.64
CD4-209ENST00000539492 TOMM70O94826 608 aa11.06□□□□□ -0.64
CD4-209ENST00000539492 APLP1P51693 650 aa11.06□□□□□ -0.64
CD4-209ENST00000539492 DALRD3Q5D0E6 543 aaKnown RBP11.06□□□□□ -0.64
CD4-209ENST00000539492 SLC52A2Q9HAB3 445 aa11.06□□□□□ -0.64
CD4-209ENST00000539492 KCPQ6ZWJ8 1503 aa11.05□□□□□ -0.64
CD4-209ENST00000539492 ZPR1O75312 459 aa11.05□□□□□ -0.64
CD4-209ENST00000539492 AMER1Q5JTC6 1135 aaPredicted RBP11.05□□□□□ -0.64
CD4-209ENST00000539492 C9orf131Q5VYM1 1079 aa11.05□□□□□ -0.64
CD4-209ENST00000539492 INTS5Q6P9B9 1019 aaKnown RBP11.05□□□□□ -0.64
CD4-209ENST00000539492 DNAJC10Q8IXB1 793 aa11.05□□□□□ -0.64
CD4-209ENST00000539492 NMRK2Q9NPI5 230 aa11.05□□□□□ -0.64
CD4-209ENST00000539492 SOS1Q07889 1333 aaPredicted RBP11.05□□□□□ -0.64
CD4-209ENST00000539492 DICER1Q9UPY3 1922 aaKnown RBP11.04□□□□□ -0.64
CD4-209ENST00000539492 POLRMTO00411 1230 aaKnown RBP11.04□□□□□ -0.64
CD4-209ENST00000539492 RNMTO43148 476 aaKnown RBP11.04□□□□□ -0.64
CD4-209ENST00000539492 COL15A1P39059 1388 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms