RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 C1orf141Q5JVX7 400 aa30.13■■■□□ 2.41
SCARB1-206ENST00000539320 LINC00116Q8NCU8 138 aa30.13■■■□□ 2.41
SCARB1-206ENST00000539320 MSL1Q68DK7 614 aa30.12■■■□□ 2.41
SCARB1-206ENST00000539320 ATP6V1AP38606 617 aa30.1■■■□□ 2.41
SCARB1-206ENST00000539320 ITPK1Q13572 414 aa30.1■■■□□ 2.41
SCARB1-206ENST00000539320 AMIGO3Q86WK7 504 aa30.1■■■□□ 2.41
SCARB1-206ENST00000539320 PHF14O94880 888 aa30.08■■■□□ 2.41
SCARB1-206ENST00000539320 CABP4P57796 275 aa30.08■■■□□ 2.41
SCARB1-206ENST00000539320 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.07■■■□□ 2.4
SCARB1-206ENST00000539320 SSFA2P28290 1259 aa30.07■■■□□ 2.4
SCARB1-206ENST00000539320 ZNF831Q5JPB2 1677 aa30.07■■■□□ 2.4
SCARB1-206ENST00000539320 GNPATO15228 680 aa30.05■■■□□ 2.4
SCARB1-206ENST00000539320 DIAPH1O60610 1272 aaKnown RBP30.05■■■□□ 2.4
SCARB1-206ENST00000539320 COL3A1P02461 1466 aaPredicted RBP30.05■■■□□ 2.4
SCARB1-206ENST00000539320 HMOX1P09601 288 aa30.04■■■□□ 2.4
SCARB1-206ENST00000539320 CNGB1Q14028 1251 aaPredicted RBP30.04■■■□□ 2.4
SCARB1-206ENST00000539320 SCN11AQ9UI33 1791 aa30.03■■■□□ 2.4
SCARB1-206ENST00000539320 SMIM5Q71RC9 77 aa30.03■■■□□ 2.4
SCARB1-206ENST00000539320 RBM42Q9BTD8 480 aaKnown RBP30.03■■■□□ 2.4
SCARB1-206ENST00000539320 UTRNP46939 3433 aa30.02■■■□□ 2.4
SCARB1-206ENST00000539320 NLGN2Q8NFZ4 835 aa30.02■■■□□ 2.4
SCARB1-206ENST00000539320 SLC4A9Q96Q91 983 aa30.02■■■□□ 2.4
SCARB1-206ENST00000539320 AKAP4Q5JQC9 854 aa30.01■■■□□ 2.39
SCARB1-206ENST00000539320 COL5A3P25940 1745 aaPredicted RBP30.01■■■□□ 2.39
SCARB1-206ENST00000539320 GPR162Q16538 588 aa29.99■■■□□ 2.39
SCARB1-206ENST00000539320 MRC1P22897 1456 aa29.98■■■□□ 2.39
SCARB1-206ENST00000539320 CHD4Q14839 1912 aa29.98■■■□□ 2.39
SCARB1-206ENST00000539320 NFATC2IPQ8NCF5 419 aa29.97■■■□□ 2.39
SCARB1-206ENST00000539320 CNTNAP4Q9C0A0 1308 aa29.96■■■□□ 2.39
SCARB1-206ENST00000539320 PELP1Q8IZL8 1130 aaKnown RBP29.95■■■□□ 2.39
SCARB1-206ENST00000539320 RTCBQ9Y3I0 505 aaKnown RBP29.95■■■□□ 2.39
SCARB1-206ENST00000539320 CICQ96RK0 1608 aaPredicted RBP29.94■■■□□ 2.38
SCARB1-206ENST00000539320 RC3H1Q5TC82 1133 aaKnown RBP29.94■■■□□ 2.38
SCARB1-206ENST00000539320 CD2APQ9Y5K6 639 aa29.94■■■□□ 2.38
SCARB1-206ENST00000539320 PTCD1O75127 700 aaKnown RBP29.93■■■□□ 2.38
SCARB1-206ENST00000539320 ADAMTS7Q9UKP4 1686 aa29.92■■■□□ 2.38
SCARB1-206ENST00000539320 U2SURPO15042 1029 aaKnown RBP29.92■■■□□ 2.38
SCARB1-206ENST00000539320 MTHFSDQ2M296 383 aaKnown RBP29.92■■■□□ 2.38
SCARB1-206ENST00000539320 SLC52A2Q9HAB3 445 aa29.92■■■□□ 2.38
SCARB1-206ENST00000539320 VIRMAQ69YN4 1812 aaKnown RBP29.92■■■□□ 2.38
SCARB1-206ENST00000539320 TJP1Q07157 1748 aa29.91■■■□□ 2.38
SCARB1-206ENST00000539320 RNMTO43148 476 aaKnown RBP29.91■■■□□ 2.38
SCARB1-206ENST00000539320 MYH14Q7Z406 1995 aaKnown RBP29.9■■■□□ 2.38
SCARB1-206ENST00000539320 ADRA2BP18089 450 aa29.9■■■□□ 2.38
SCARB1-206ENST00000539320 TRAPPC3LQ5T215 181 aa29.89■■■□□ 2.38
SCARB1-206ENST00000539320 LGR6Q9HBX8 967 aa29.89■■■□□ 2.38
SCARB1-206ENST00000539320 RPS6KA4O75676 772 aa29.87■■■□□ 2.37
SCARB1-206ENST00000539320 CFAP53Q96M91 514 aa29.87■■■□□ 2.37
SCARB1-206ENST00000539320 C4AP0C0L4 1744 aa29.86■■■□□ 2.37
SCARB1-206ENST00000539320 YBX3P16989 372 aaKnown RBP eCLIP29.85■■■□□ 2.37
SCARB1-206ENST00000539320 CRKLP46109 303 aaKnown RBP29.85■■■□□ 2.37
SCARB1-206ENST00000539320 ARHGEF1Q92888 912 aaKnown RBP29.85■■■□□ 2.37
SCARB1-206ENST00000539320 GOLGB1Q14789 3259 aaKnown RBP29.85■■■□□ 2.37
SCARB1-206ENST00000539320 KCPQ6ZWJ8 1503 aa29.83■■■□□ 2.37
SCARB1-206ENST00000539320 MMP10P09238 476 aa29.83■■■□□ 2.37
SCARB1-206ENST00000539320 ZNF784Q8NCA9 323 aaPredicted RBP29.83■■■□□ 2.37
SCARB1-206ENST00000539320 GAS2L2Q8NHY3 880 aa29.83■■■□□ 2.37
SCARB1-206ENST00000539320 GRIN3BO60391 1043 aa29.82■■■□□ 2.36
SCARB1-206ENST00000539320 RFC4P35249 363 aa29.82■■■□□ 2.36
SCARB1-206ENST00000539320 PPP2R1AP30153 589 aa29.81■■■□□ 2.36
SCARB1-206ENST00000539320 NLGN1Q8N2Q7 840 aa29.81■■■□□ 2.36
SCARB1-206ENST00000539320 SLC39A6Q13433 755 aa29.8■■■□□ 2.36
SCARB1-206ENST00000539320 DNAJC10Q8IXB1 793 aa29.8■■■□□ 2.36
SCARB1-206ENST00000539320 GYS1P13807 737 aa29.79■■■□□ 2.36
SCARB1-206ENST00000539320 NUDCQ9Y266 331 aa29.78■■■□□ 2.36
SCARB1-206ENST00000539320 UBR2Q8IWV8 1755 aa29.77■■■□□ 2.36
SCARB1-206ENST00000539320 GNAT3A8MTJ3 354 aa29.77■■■□□ 2.36
SCARB1-206ENST00000539320 PRKAR2BP31323 418 aa29.77■■■□□ 2.36
SCARB1-206ENST00000539320 RSPH6AQ9H0K4 717 aa29.77■■■□□ 2.36
SCARB1-206ENST00000539320 INTS5Q6P9B9 1019 aaKnown RBP29.76■■■□□ 2.35
SCARB1-206ENST00000539320 CCDC87Q9NVE4 849 aa29.76■■■□□ 2.35
SCARB1-206ENST00000539320 C10orf71Q711Q0 1435 aa29.76■■■□□ 2.35
SCARB1-206ENST00000539320 KIF13BQ9NQT8 1826 aa29.75■■■□□ 2.35
SCARB1-206ENST00000539320 USP42Q9H9J4 1324 aaKnown RBP29.74■■■□□ 2.35
SCARB1-206ENST00000539320 TEFQ10587 303 aa29.73■■■□□ 2.35
SCARB1-206ENST00000539320 SRP68Q9UHB9 627 aaKnown RBP29.73■■■□□ 2.35
SCARB1-206ENST00000539320 SOS1Q07889 1333 aaPredicted RBP29.72■■■□□ 2.35
SCARB1-206ENST00000539320 SIPA1L3O60292 1781 aaPredicted RBP29.72■■■□□ 2.35
SCARB1-206ENST00000539320 CYP19A1P11511 503 aaPredicted RBP29.72■■■□□ 2.35
SCARB1-206ENST00000539320 TTC5Q8N0Z6 440 aa29.72■■■□□ 2.35
SCARB1-206ENST00000539320 VSIG10Q8N0Z9 540 aa29.72■■■□□ 2.35
SCARB1-206ENST00000539320 IL17REQ8NFR9 667 aa29.72■■■□□ 2.35
SCARB1-206ENST00000539320 PXDNLA1KZ92 1463 aa29.72■■■□□ 2.35
SCARB1-206ENST00000539320 U2AF1L5P0DN76 240 aaPredicted RBP29.71■■■□□ 2.35
SCARB1-206ENST00000539320 U2AF1Q01081 240 aaKnown RBP eCLIP29.71■■■□□ 2.35
SCARB1-206ENST00000539320 PHACTR3Q96KR7 559 aa29.71■■■□□ 2.35
SCARB1-206ENST00000539320 PARP3Q9Y6F1 533 aa29.71■■■□□ 2.35
SCARB1-206ENST00000539320 KIAA1551Q9HCM1 1747 aa29.71■■■□□ 2.35
SCARB1-206ENST00000539320 CEMIPQ8WUJ3 1361 aa29.7■■■□□ 2.35
SCARB1-206ENST00000539320 WWC3Q9ULE0 1092 aa29.7■■■□□ 2.35
SCARB1-206ENST00000539320 ZBTB1Q9Y2K1 713 aa29.68■■■□□ 2.34
SCARB1-206ENST00000539320 COL15A1P39059 1388 aa29.67■■■□□ 2.34
SCARB1-206ENST00000539320 FKBP8Q14318 412 aa29.67■■■□□ 2.34
SCARB1-206ENST00000539320 FCHSD2O94868 740 aa29.65■■■□□ 2.34
SCARB1-206ENST00000539320 TGFB2P61812 414 aa29.65■■■□□ 2.34
SCARB1-206ENST00000539320 ZNF790Q6PG37 636 aa29.65■■■□□ 2.34
SCARB1-206ENST00000539320 HEG1Q9ULI3 1381 aa29.64■■■□□ 2.34
SCARB1-206ENST00000539320 N4BP2Q86UW6 1770 aaPredicted RBP29.64■■■□□ 2.34
SCARB1-206ENST00000539320 ZPR1O75312 459 aa29.64■■■□□ 2.34
SCARB1-206ENST00000539320 ZNF496Q96IT1 587 aaPredicted RBP29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms