RNA–Protein interactions for RNA: ENST00000539121.1

USP30-210, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 4

Gene USP30, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-210ENST00000539121 TIMELESSQ9UNS1 1208 aa8.67□□□□□ -1.02
USP30-210ENST00000539121 C4BP0C0L5 1744 aa8.66□□□□□ -1.02
USP30-210ENST00000539121 LOC102724428A0A0B4J2F2 783 aa8.66□□□□□ -1.02
USP30-210ENST00000539121 SIK1P57059 783 aa8.66□□□□□ -1.02
USP30-210ENST00000539121 RBM42Q9BTD8 480 aaKnown RBP8.66□□□□□ -1.02
USP30-210ENST00000539121 EMILIN1Q9Y6C2 1016 aa8.66□□□□□ -1.02
USP30-210ENST00000539121 UBR3Q6ZT12 1888 aa8.66□□□□□ -1.02
USP30-210ENST00000539121 MAP2P11137 1827 aaKnown RBP8.66□□□□□ -1.02
USP30-210ENST00000539121 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.65□□□□□ -1.02
USP30-210ENST00000539121 IFNL2Q8IZJ0 200 aa8.65□□□□□ -1.02
USP30-210ENST00000539121 EYA1Q99502 592 aa8.65□□□□□ -1.02
USP30-210ENST00000539121 TMOD3Q9NYL9 352 aa8.65□□□□□ -1.02
USP30-210ENST00000539121 ANKRD26Q9UPS8 1709 aa8.65□□□□□ -1.03
USP30-210ENST00000539121 TOGARAM1Q9Y4F4 1720 aa8.65□□□□□ -1.03
USP30-210ENST00000539121 ADCY9O60503 1353 aa8.64□□□□□ -1.03
USP30-210ENST00000539121 PPM1GO15355 546 aaPredicted RBP8.64□□□□□ -1.03
USP30-210ENST00000539121 GPBP1L1Q9HC44 474 aaPredicted RBP8.64□□□□□ -1.03
USP30-210ENST00000539121 POLKQ9UBT6 870 aa8.64□□□□□ -1.03
USP30-210ENST00000539121 ATP10DQ9P241 1426 aa8.63□□□□□ -1.03
USP30-210ENST00000539121 IGSF1Q8N6C5 1336 aa8.63□□□□□ -1.03
USP30-210ENST00000539121 PHKG2P15735 406 aa8.63□□□□□ -1.03
USP30-210ENST00000539121 AMIGO3Q86WK7 504 aa8.63□□□□□ -1.03
USP30-210ENST00000539121 ASAP1Q9ULH1 1129 aa8.63□□□□□ -1.03
USP30-210ENST00000539121 ERVV-2B6SEH9 535 aa8.62□□□□□ -1.03
USP30-210ENST00000539121 GNPATO15228 680 aa8.62□□□□□ -1.03
USP30-210ENST00000539121 PHF14O94880 888 aa8.62□□□□□ -1.03
USP30-210ENST00000539121 HSP90AB1P08238 724 aaKnown RBP8.62□□□□□ -1.03
USP30-210ENST00000539121 ATP6V1AP38606 617 aa8.62□□□□□ -1.03
USP30-210ENST00000539121 TGFB2P61812 414 aa8.62□□□□□ -1.03
USP30-210ENST00000539121 RC3H1Q5TC82 1133 aaKnown RBP8.62□□□□□ -1.03
USP30-210ENST00000539121 NLGN1Q8N2Q7 840 aa8.62□□□□□ -1.03
USP30-210ENST00000539121 LINC00116Q8NCU8 138 aa8.62□□□□□ -1.03
USP30-210ENST00000539121 ATG3Q9NT62 314 aa8.62□□□□□ -1.03
USP30-210ENST00000539121 ZNF831Q5JPB2 1677 aa8.62□□□□□ -1.03
USP30-210ENST00000539121 PCNTO95613 3336 aa8.62□□□□□ -1.03
USP30-210ENST00000539121 CLSPNQ9HAW4 1339 aa8.61□□□□□ -1.03
USP30-210ENST00000539121 HSPA6P17066 643 aa8.61□□□□□ -1.03
USP30-210ENST00000539121 ITPK1Q13572 414 aa8.61□□□□□ -1.03
USP30-210ENST00000539121 IFFO2Q5TF58 517 aa8.61□□□□□ -1.03
USP30-210ENST00000539121 RTCBQ9Y3I0 505 aaKnown RBP8.61□□□□□ -1.03
USP30-210ENST00000539121 KIF13BQ9NQT8 1826 aa8.6□□□□□ -1.03
USP30-210ENST00000539121 MMP10P09238 476 aa8.6□□□□□ -1.03
USP30-210ENST00000539121 EIF4A2Q14240 407 aaKnown RBP8.6□□□□□ -1.03
USP30-210ENST00000539121 TRAPPC3LQ5T215 181 aa8.6□□□□□ -1.03
USP30-210ENST00000539121 DCAF5Q96JK2 942 aa8.6□□□□□ -1.03
USP30-210ENST00000539121 AMOTQ4VCS5 1084 aa8.59□□□□□ -1.03
USP30-210ENST00000539121 PLEKHO1Q53GL0 409 aaPredicted RBP8.59□□□□□ -1.03
USP30-210ENST00000539121 SMIM5Q71RC9 77 aa8.59□□□□□ -1.03
USP30-210ENST00000539121 KDRP35968 1356 aa8.59□□□□□ -1.03
USP30-210ENST00000539121 CICQ96RK0 1608 aaPredicted RBP8.58□□□□□ -1.04
USP30-210ENST00000539121 CNTNAP4Q9C0A0 1308 aa8.58□□□□□ -1.04
USP30-210ENST00000539121 RPS6KA4O75676 772 aa8.58□□□□□ -1.04
USP30-210ENST00000539121 ARHGEF1Q92888 912 aaKnown RBP8.58□□□□□ -1.04
USP30-210ENST00000539121 SLC4A9Q96Q91 983 aa8.58□□□□□ -1.04
USP30-210ENST00000539121 CCDC87Q9NVE4 849 aa8.58□□□□□ -1.04
USP30-210ENST00000539121 PXDNLA1KZ92 1463 aa8.57□□□□□ -1.04
USP30-210ENST00000539121 KIF3CO14782 793 aa8.57□□□□□ -1.04
USP30-210ENST00000539121 GYS1P13807 737 aa8.57□□□□□ -1.04
USP30-210ENST00000539121 RFC4P35249 363 aa8.57□□□□□ -1.04
USP30-210ENST00000539121 ZNF526Q8TF50 670 aaPredicted RBP8.57□□□□□ -1.04
USP30-210ENST00000539121 C10orf71Q711Q0 1435 aa8.56□□□□□ -1.04
USP30-210ENST00000539121 MYH14Q7Z406 1995 aaKnown RBP8.56□□□□□ -1.04
USP30-210ENST00000539121 TNNT2P45379 298 aaPredicted RBP8.56□□□□□ -1.04
USP30-210ENST00000539121 MTHFSP49914 203 aa8.56□□□□□ -1.04
USP30-210ENST00000539121 CABP4P57796 275 aa8.56□□□□□ -1.04
USP30-210ENST00000539121 ZNF530Q6P9A1 599 aaPredicted RBP8.56□□□□□ -1.04
USP30-210ENST00000539121 BCS1LQ9Y276 419 aa8.56□□□□□ -1.04
USP30-210ENST00000539121 PARP3Q9Y6F1 533 aa8.56□□□□□ -1.04
USP30-210ENST00000539121 COL5A3P25940 1745 aaPredicted RBP8.55□□□□□ -1.04
USP30-210ENST00000539121 A0A0G2JLW4 131 aa8.55□□□□□ -1.04
USP30-210ENST00000539121 TOMM70O94826 608 aa8.55□□□□□ -1.04
USP30-210ENST00000539121 CENPBP07199 599 aaPredicted RBP8.55□□□□□ -1.04
USP30-210ENST00000539121 APLP1P51693 650 aa8.55□□□□□ -1.04
USP30-210ENST00000539121 EIF4G2P78344 907 aaKnown RBP eCLIP8.55□□□□□ -1.04
USP30-210ENST00000539121 C1orf141Q5JVX7 400 aa8.55□□□□□ -1.04
USP30-210ENST00000539121 PANK3Q9H999 370 aa8.55□□□□□ -1.04
USP30-210ENST00000539121 WWC3Q9ULE0 1092 aa8.55□□□□□ -1.04
USP30-210ENST00000539121 BRCA1P38398 1863 aaKnown RBP8.55□□□□□ -1.04
USP30-210ENST00000539121 KDM6AO15550 1401 aaPredicted RBP8.54□□□□□ -1.04
USP30-210ENST00000539121 C4AP0C0L4 1744 aa8.54□□□□□ -1.04
USP30-210ENST00000539121 KIAA1551Q9HCM1 1747 aa8.54□□□□□ -1.04
USP30-210ENST00000539121 N4BP2Q86UW6 1770 aaPredicted RBP8.54□□□□□ -1.04
USP30-210ENST00000539121 FCHSD2O94868 740 aa8.54□□□□□ -1.04
USP30-210ENST00000539121 DPEP1P16444 411 aa8.54□□□□□ -1.04
USP30-210ENST00000539121 KCNA3P22001 575 aa8.54□□□□□ -1.04
USP30-210ENST00000539121 ARHGAP27Q6ZUM4 889 aa8.54□□□□□ -1.04
USP30-210ENST00000539121 NFATC2IPQ8NCF5 419 aa8.54□□□□□ -1.04
USP30-210ENST00000539121 POLR3GLQ9BT43 218 aa8.54□□□□□ -1.04
USP30-210ENST00000539121 PIM2Q9P1W9 311 aa8.54□□□□□ -1.04
USP30-210ENST00000539121 ARFGEF1Q9Y6D6 1849 aa8.53□□□□□ -1.04
USP30-210ENST00000539121 PTCD1O75127 700 aaKnown RBP8.53□□□□□ -1.04
USP30-210ENST00000539121 CRKLP46109 303 aaKnown RBP8.53□□□□□ -1.04
USP30-210ENST00000539121 MORC1Q86VD1 984 aa8.53□□□□□ -1.04
USP30-210ENST00000539121 USP42Q9H9J4 1324 aaKnown RBP8.53□□□□□ -1.04
USP30-210ENST00000539121 DALRD3Q5D0E6 543 aaKnown RBP8.52□□□□□ -1.05
USP30-210ENST00000539121 AKAP4Q5JQC9 854 aa8.52□□□□□ -1.05
USP30-210ENST00000539121 SULT6B1Q6IMI4 303 aa8.52□□□□□ -1.05
USP30-210ENST00000539121 DNAJC5GQ8N7S2 189 aa8.52□□□□□ -1.05
USP30-210ENST00000539121 RBM46Q8TBY0 533 aaKnown RBP8.52□□□□□ -1.05
USP30-210ENST00000539121 CCER1Q8TC90 406 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms