RNA–Protein interactions for RNA: ENST00000539063.5

PHC1-206, Transcript of polyhomeotic homolog 1, humanhuman

TSL 3

Gene PHC1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-206ENST00000539063 HOXB7P09629 217 aa12.27□□□□□ -0.45
PHC1-206ENST00000539063 CABP4P57796 275 aa12.27□□□□□ -0.45
PHC1-206ENST00000539063 TTC5Q8N0Z6 440 aa12.27□□□□□ -0.45
PHC1-206ENST00000539063 MRPL50Q8N5N7 158 aaKnown RBP12.27□□□□□ -0.45
PHC1-206ENST00000539063 PANK1Q8TE04 598 aa12.27□□□□□ -0.45
PHC1-206ENST00000539063 ARHGAP45Q92619 1136 aa12.27□□□□□ -0.45
PHC1-206ENST00000539063 CLUAP1Q96AJ1 413 aa12.27□□□□□ -0.45
PHC1-206ENST00000539063 MEX3CQ5U5Q3 659 aaKnown RBP12.26□□□□□ -0.45
PHC1-206ENST00000539063 SLC52A2Q9HAB3 445 aa12.26□□□□□ -0.45
PHC1-206ENST00000539063 COG6Q9Y2V7 657 aa12.26□□□□□ -0.45
PHC1-206ENST00000539063 TCERG1O14776 1098 aaKnown RBP12.25□□□□□ -0.45
PHC1-206ENST00000539063 MVPQ14764 893 aaKnown RBP12.25□□□□□ -0.45
PHC1-206ENST00000539063 HDGFL1Q5TGJ6 251 aa12.25□□□□□ -0.45
PHC1-206ENST00000539063 ITPRIPQ8IWB1 547 aa12.25□□□□□ -0.45
PHC1-206ENST00000539063 DDX54Q8TDD1 881 aaKnown RBP12.25□□□□□ -0.45
PHC1-206ENST00000539063 NGLY1Q96IV0 654 aa12.25□□□□□ -0.45
PHC1-206ENST00000539063 DDX19BQ9UMR2 479 aa12.25□□□□□ -0.45
PHC1-206ENST00000539063 THRAP3Q9Y2W1 955 aaKnown RBP12.25□□□□□ -0.45
PHC1-206ENST00000539063 EXOC5O00471 708 aa12.24□□□□□ -0.45
PHC1-206ENST00000539063 CYP27B1O15528 508 aa12.24□□□□□ -0.45
PHC1-206ENST00000539063 PTPRCP08575 1304 aa12.24□□□□□ -0.45
PHC1-206ENST00000539063 TRIM27P14373 513 aa12.24□□□□□ -0.45
PHC1-206ENST00000539063 EIF4A1P60842 406 aaKnown RBP12.24□□□□□ -0.45
PHC1-206ENST00000539063 KRT24Q2M2I5 525 aa12.24□□□□□ -0.45
PHC1-206ENST00000539063 PKD1L3Q7Z443 1732 aa12.24□□□□□ -0.45
PHC1-206ENST00000539063 ERVV-2B6SEH9 535 aa12.23□□□□□ -0.45
PHC1-206ENST00000539063 C8orf37Q96NL8 207 aa12.23□□□□□ -0.45
PHC1-206ENST00000539063 KDM6AO15550 1401 aaPredicted RBP12.22□□□□□ -0.45
PHC1-206ENST00000539063 SLC4A2P04920 1241 aa12.22□□□□□ -0.45
PHC1-206ENST00000539063 UNC5CLQ8IV45 518 aa12.22□□□□□ -0.45
PHC1-206ENST00000539063 SPATA31A1Q5TZJ5 1347 aa12.21□□□□□ -0.45
PHC1-206ENST00000539063 EIF2S2P20042 333 aaKnown RBP12.21□□□□□ -0.45
PHC1-206ENST00000539063 HSPA1LP34931 641 aa12.21□□□□□ -0.45
PHC1-206ENST00000539063 NKX1-1Q15270 411 aaPredicted RBP12.21□□□□□ -0.45
PHC1-206ENST00000539063 NFATC2IPQ8NCF5 419 aa12.21□□□□□ -0.45
PHC1-206ENST00000539063 NECTIN2Q92692 538 aa12.21□□□□□ -0.45
PHC1-206ENST00000539063 FMNL2Q96PY5 1086 aa12.21□□□□□ -0.45
PHC1-206ENST00000539063 PLCH1Q4KWH8 1693 aa12.21□□□□□ -0.45
PHC1-206ENST00000539063 RLBP1P12271 317 aa12.2□□□□□ -0.46
PHC1-206ENST00000539063 ZNF790Q6PG37 636 aa12.2□□□□□ -0.46
PHC1-206ENST00000539063 CENPQQ7L2Z9 268 aaPredicted RBP12.2□□□□□ -0.46
PHC1-206ENST00000539063 TMEM57Q8N5G2 664 aa12.2□□□□□ -0.46
PHC1-206ENST00000539063 TMOD3Q9NYL9 352 aa12.2□□□□□ -0.46
PHC1-206ENST00000539063 TNNQ9UQP3 1299 aa12.2□□□□□ -0.46
PHC1-206ENST00000539063 SLIT2O94813 1529 aa12.2□□□□□ -0.46
PHC1-206ENST00000539063 MRC1P22897 1456 aa12.2□□□□□ -0.46
PHC1-206ENST00000539063 DISP2A7MBM2 1401 aa12.2□□□□□ -0.46
PHC1-206ENST00000539063 SPATA31A5Q5VU36 1347 aa12.19□□□□□ -0.46
PHC1-206ENST00000539063 SPATA31A7Q8IWB4 1347 aa12.19□□□□□ -0.46
PHC1-206ENST00000539063 A0A0G2JS52 829 aa12.19□□□□□ -0.46
PHC1-206ENST00000539063 KCNQ3O43525 872 aa12.19□□□□□ -0.46
PHC1-206ENST00000539063 MYT1Q01538 1121 aa12.19□□□□□ -0.46
PHC1-206ENST00000539063 FKBP5Q13451 457 aaPredicted RBP12.19□□□□□ -0.46
PHC1-206ENST00000539063 DDB1Q16531 1140 aa12.19□□□□□ -0.46
PHC1-206ENST00000539063 ADAMTS7Q9UKP4 1686 aa12.19□□□□□ -0.46
PHC1-206ENST00000539063 TNS2Q63HR2 1409 aa12.19□□□□□ -0.46
PHC1-206ENST00000539063 ABCC4O15439 1325 aa12.18□□□□□ -0.46
PHC1-206ENST00000539063 NWD2Q9ULI1 1742 aa12.18□□□□□ -0.46
PHC1-206ENST00000539063 FLIIQ13045 1269 aa12.18□□□□□ -0.46
PHC1-206ENST00000539063 SLC39A6Q13433 755 aa12.18□□□□□ -0.46
PHC1-206ENST00000539063 VPS72Q15906 364 aa12.18□□□□□ -0.46
PHC1-206ENST00000539063 BARGINQ6ZT62 677 aa12.18□□□□□ -0.46
PHC1-206ENST00000539063 RWDD1Q9H446 243 aaPredicted RBP12.18□□□□□ -0.46
PHC1-206ENST00000539063 DBF4Q9UBU7 674 aaPredicted RBP12.18□□□□□ -0.46
PHC1-206ENST00000539063 KDM3BQ7LBC6 1761 aa12.18□□□□□ -0.46
PHC1-206ENST00000539063 GIGYF1O75420 1035 aaPredicted RBP12.17□□□□□ -0.46
PHC1-206ENST00000539063 SNRPA1P09661 255 aaKnown RBP12.17□□□□□ -0.46
PHC1-206ENST00000539063 CCT4P50991 539 aaKnown RBP12.17□□□□□ -0.46
PHC1-206ENST00000539063 USP21Q9UK80 565 aa12.17□□□□□ -0.46
PHC1-206ENST00000539063 SCN11AQ9UI33 1791 aa12.17□□□□□ -0.46
PHC1-206ENST00000539063 DDX58O95786 925 aaKnown RBP12.16□□□□□ -0.46
PHC1-206ENST00000539063 SLC4A10Q6U841 1118 aa12.16□□□□□ -0.46
PHC1-206ENST00000539063 HYPKQ9NX55 129 aa12.16□□□□□ -0.46
PHC1-206ENST00000539063 NRAPQ86VF7 1730 aa12.16□□□□□ -0.46
PHC1-206ENST00000539063 INTS3Q68E01 1043 aaKnown RBP12.15□□□□□ -0.46
PHC1-206ENST00000539063 FNBP4Q8N3X1 1017 aaPredicted RBP12.15□□□□□ -0.46
PHC1-206ENST00000539063 CHPF2Q9P2E5 772 aa12.15□□□□□ -0.46
PHC1-206ENST00000539063 SYTL4Q96C24 671 aaPredicted RBP12.14□□□□□ -0.47
PHC1-206ENST00000539063 ZNF496Q96IT1 587 aaPredicted RBP12.14□□□□□ -0.47
PHC1-206ENST00000539063 HEG1Q9ULI3 1381 aa12.14□□□□□ -0.47
PHC1-206ENST00000539063 FAM98CQ17RN3 349 aaKnown RBP12.13□□□□□ -0.47
PHC1-206ENST00000539063 G2E3Q7L622 706 aa12.13□□□□□ -0.47
PHC1-206ENST00000539063 TEX13AQ9BXU3 409 aaPredicted RBP12.13□□□□□ -0.47
PHC1-206ENST00000539063 DDX21Q9NR30 783 aaKnown RBP eCLIP12.13□□□□□ -0.47
PHC1-206ENST00000539063 SIPA1L3O60292 1781 aaPredicted RBP12.13□□□□□ -0.47
PHC1-206ENST00000539063 AFF2P51816 1311 aa12.12□□□□□ -0.47
PHC1-206ENST00000539063 ERBB4Q15303 1308 aa12.12□□□□□ -0.47
PHC1-206ENST00000539063 LRP6O75581 1613 aa12.12□□□□□ -0.47
PHC1-206ENST00000539063 ZBTB40Q9NUA8 1239 aa12.12□□□□□ -0.47
PHC1-206ENST00000539063 PXDNLA1KZ92 1463 aa12.11□□□□□ -0.47
PHC1-206ENST00000539063 BCL9LQ86UU0 1499 aa12.11□□□□□ -0.47
PHC1-206ENST00000539063 PTCD1O75127 700 aaKnown RBP12.11□□□□□ -0.47
PHC1-206ENST00000539063 GNAI3P08754 354 aa12.11□□□□□ -0.47
PHC1-206ENST00000539063 DNAAF4Q8WXU2 420 aa12.11□□□□□ -0.47
PHC1-206ENST00000539063 TRPC5Q9UL62 973 aaPredicted RBP12.11□□□□□ -0.47
PHC1-206ENST00000539063 HDAC5Q9UQL6 1122 aa12.11□□□□□ -0.47
PHC1-206ENST00000539063 VIRMAQ69YN4 1812 aaKnown RBP12.11□□□□□ -0.47
PHC1-206ENST00000539063 WNK3Q9BYP7 1800 aa12.11□□□□□ -0.47
PHC1-206ENST00000539063 KDM2BQ8NHM5 1336 aa12.11□□□□□ -0.47
PHC1-206ENST00000539063 F6X3S4 739 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms