RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 MBIPQ9NS73 344 aa18.23■□□□□ 0.51
CDCA3-207ENST00000538862 RGPD5Q99666 1765 aa18.22■□□□□ 0.51
CDCA3-207ENST00000538862 A0A0G2JS52 829 aa18.22■□□□□ 0.51
CDCA3-207ENST00000538862 EVA1CP58658 441 aa18.22■□□□□ 0.51
CDCA3-207ENST00000538862 SEPT12Q8IYM1 358 aa18.22■□□□□ 0.51
CDCA3-207ENST00000538862 IL27Q8NEV9 243 aa18.22■□□□□ 0.51
CDCA3-207ENST00000538862 NFAT5O94916 1531 aa18.22■□□□□ 0.51
CDCA3-207ENST00000538862 SPATA31A5Q5VU36 1347 aa18.22■□□□□ 0.51
CDCA3-207ENST00000538862 SPATA31A7Q8IWB4 1347 aa18.22■□□□□ 0.51
CDCA3-207ENST00000538862 UPF1Q92900 1129 aaKnown RBP eCLIP18.21■□□□□ 0.51
CDCA3-207ENST00000538862 USP31Q70CQ4 1352 aa18.21■□□□□ 0.51
CDCA3-207ENST00000538862 ABCC4O15439 1325 aa18.21■□□□□ 0.51
CDCA3-207ENST00000538862 LARP1Q6PKG0 1096 aaKnown RBP18.21■□□□□ 0.51
CDCA3-207ENST00000538862 TSPYL6Q8N831 410 aa18.21■□□□□ 0.51
CDCA3-207ENST00000538862 THUMPD2Q9BTF0 503 aaKnown RBP18.21■□□□□ 0.51
CDCA3-207ENST00000538862 COL18A1P39060 1754 aa18.21■□□□□ 0.51
CDCA3-207ENST00000538862 USP54Q70EL1 1684 aa18.21■□□□□ 0.5
CDCA3-207ENST00000538862 KCNH5Q8NCM2 988 aa18.2■□□□□ 0.5
CDCA3-207ENST00000538862 TWISTNBQ3B726 338 aaPredicted RBP18.19■□□□□ 0.5
CDCA3-207ENST00000538862 BMP2KLQ5H9B9 411 aa18.19■□□□□ 0.5
CDCA3-207ENST00000538862 AXIN2Q9Y2T1 843 aa18.19■□□□□ 0.5
CDCA3-207ENST00000538862 KIF24Q5T7B8 1368 aa18.19■□□□□ 0.5
CDCA3-207ENST00000538862 COL5A2P05997 1499 aaPredicted RBP18.19■□□□□ 0.5
CDCA3-207ENST00000538862 RBM25P49756 843 aaKnown RBP18.19■□□□□ 0.5
CDCA3-207ENST00000538862 ARHGEF25Q86VW2 580 aa18.19■□□□□ 0.5
CDCA3-207ENST00000538862 API5Q9BZZ5 524 aaKnown RBP18.19■□□□□ 0.5
CDCA3-207ENST00000538862 LNPKQ9C0E8 428 aa18.19■□□□□ 0.5
CDCA3-207ENST00000538862 SPATA31A1Q5TZJ5 1347 aa18.18■□□□□ 0.5
CDCA3-207ENST00000538862 LTN1O94822 1766 aa18.18■□□□□ 0.5
CDCA3-207ENST00000538862 OVOS2A0A0J9YW53 1432 aa18.18■□□□□ 0.5
CDCA3-207ENST00000538862 OVOS2Q6IE36 1432 aa18.18■□□□□ 0.5
CDCA3-207ENST00000538862 ONECUT3O60422 494 aaPredicted RBP18.17■□□□□ 0.5
CDCA3-207ENST00000538862 RRS1Q15050 365 aaKnown RBP18.17■□□□□ 0.5
CDCA3-207ENST00000538862 CHMP5Q9NZZ3 219 aa18.16■□□□□ 0.5
CDCA3-207ENST00000538862 ANKRD45Q5TZF3 282 aa18.15■□□□□ 0.5
CDCA3-207ENST00000538862 C8orf58Q8NAV2 365 aa18.15■□□□□ 0.5
CDCA3-207ENST00000538862 HSCBQ8IWL3 235 aa18.15■□□□□ 0.5
CDCA3-207ENST00000538862 SNX21Q969T3 373 aa18.15■□□□□ 0.5
CDCA3-207ENST00000538862 BRPF3Q9ULD4 1205 aa18.15■□□□□ 0.5
CDCA3-207ENST00000538862 ELL2O00472 640 aaPredicted RBP18.14■□□□□ 0.49
CDCA3-207ENST00000538862 THSD7AQ9UPZ6 1657 aa18.14■□□□□ 0.49
CDCA3-207ENST00000538862 FAM182BQ5T319 152 aa18.13■□□□□ 0.49
CDCA3-207ENST00000538862 KRT27Q7Z3Y8 459 aa18.13■□□□□ 0.49
CDCA3-207ENST00000538862 SIRT2Q8IXJ6 389 aa18.13■□□□□ 0.49
CDCA3-207ENST00000538862 CRB1P82279 1406 aa18.12■□□□□ 0.49
CDCA3-207ENST00000538862 TOM1L2Q6ZVM7 507 aa18.11■□□□□ 0.49
CDCA3-207ENST00000538862 EIF4A2Q14240 407 aaKnown RBP18.11■□□□□ 0.49
CDCA3-207ENST00000538862 C1orf115Q9H7X2 142 aa18.11■□□□□ 0.49
CDCA3-207ENST00000538862 CSB-PGBD3P0DP91 1061 aa18.1■□□□□ 0.49
CDCA3-207ENST00000538862 MCM4P33991 863 aa18.1■□□□□ 0.49
CDCA3-207ENST00000538862 WDR17Q8IZU2 1322 aa18.1■□□□□ 0.49
CDCA3-207ENST00000538862 INTS3Q68E01 1043 aaKnown RBP18.1■□□□□ 0.49
CDCA3-207ENST00000538862 CHL1O00533 1208 aa18.09■□□□□ 0.49
CDCA3-207ENST00000538862 SULT6B1Q6IMI4 303 aa18.09■□□□□ 0.49
CDCA3-207ENST00000538862 SPRYD3Q8NCJ5 442 aa18.09■□□□□ 0.49
CDCA3-207ENST00000538862 DCTN1Q14203 1278 aa18.08■□□□□ 0.49
CDCA3-207ENST00000538862 L1TD1Q5T7N2 865 aaKnown RBP18.08■□□□□ 0.49
CDCA3-207ENST00000538862 BARGINQ6ZT62 677 aa18.08■□□□□ 0.49
CDCA3-207ENST00000538862 DCTPP1Q9H773 170 aa18.08■□□□□ 0.48
CDCA3-207ENST00000538862 ABCC6O95255 1503 aa18.07■□□□□ 0.48
CDCA3-207ENST00000538862 MAP3K19Q56UN5 1328 aa18.07■□□□□ 0.48
CDCA3-207ENST00000538862 DDIT3P35638 169 aa18.07■□□□□ 0.48
CDCA3-207ENST00000538862 RGPD1P0DJD0 1748 aa18.06■□□□□ 0.48
CDCA3-207ENST00000538862 AEBP1Q8IUX7 1158 aa18.06■□□□□ 0.48
CDCA3-207ENST00000538862 ERBB3P21860 1342 aa18.06■□□□□ 0.48
CDCA3-207ENST00000538862 WNK3Q9BYP7 1800 aa18.06■□□□□ 0.48
CDCA3-207ENST00000538862 TBC1D9Q6ZT07 1266 aa18.06■□□□□ 0.48
CDCA3-207ENST00000538862 LTV1Q96GA3 475 aaPredicted RBP18.06■□□□□ 0.48
CDCA3-207ENST00000538862 CIZ1Q9ULV3 898 aaPredicted RBP18.06■□□□□ 0.48
CDCA3-207ENST00000538862 PTPRCP08575 1304 aa18.05■□□□□ 0.48
CDCA3-207ENST00000538862 RPAP2Q8IXW5 612 aaPredicted RBP18.05■□□□□ 0.48
CDCA3-207ENST00000538862 ANKRD24Q8TF21 1146 aa18.05■□□□□ 0.48
CDCA3-207ENST00000538862 KIF2CQ99661 725 aa18.05■□□□□ 0.48
CDCA3-207ENST00000538862 THRAP3Q9Y2W1 955 aaKnown RBP18.05■□□□□ 0.48
CDCA3-207ENST00000538862 CDC45O75419 566 aa18.04■□□□□ 0.48
CDCA3-207ENST00000538862 RTN4Q9NQC3 1192 aaKnown RBP18.04■□□□□ 0.48
CDCA3-207ENST00000538862 PARP4Q9UKK3 1724 aaKnown RBP18.04■□□□□ 0.48
CDCA3-207ENST00000538862 AMPHP49418 695 aa18.04■□□□□ 0.48
CDCA3-207ENST00000538862 ANKRD44Q8N8A2 993 aa18.04■□□□□ 0.48
CDCA3-207ENST00000538862 IP6K1Q92551 441 aa18.04■□□□□ 0.48
CDCA3-207ENST00000538862 NLRP2Q9NX02 1062 aa18.04■□□□□ 0.48
CDCA3-207ENST00000538862 PEAK1Q9H792 1746 aa18.04■□□□□ 0.48
CDCA3-207ENST00000538862 CARD10Q9BWT7 1032 aa18.03■□□□□ 0.48
CDCA3-207ENST00000538862 LRRC37A3O60309 1634 aa18.02■□□□□ 0.48
CDCA3-207ENST00000538862 DDX11L8A8MPP1 907 aa18.02■□□□□ 0.48
CDCA3-207ENST00000538862 HOXC9P31274 260 aa18.02■□□□□ 0.48
CDCA3-207ENST00000538862 PLEKHM2Q8IWE5 1019 aa18.02■□□□□ 0.48
CDCA3-207ENST00000538862 RGPD2P0DJD1 1756 aa18.02■□□□□ 0.47
CDCA3-207ENST00000538862 HSP90AB2PQ58FF8 381 aa18.02■□□□□ 0.47
CDCA3-207ENST00000538862 ATP10DQ9P241 1426 aa18■□□□□ 0.47
CDCA3-207ENST00000538862 HSP90AB1P08238 724 aaKnown RBP18■□□□□ 0.47
CDCA3-207ENST00000538862 MCM10Q7L590 875 aa18■□□□□ 0.47
CDCA3-207ENST00000538862 TRAK2O60296 914 aa18■□□□□ 0.47
CDCA3-207ENST00000538862 DEFB132Q7Z7B7 95 aa18■□□□□ 0.47
CDCA3-207ENST00000538862 FSD2A1L4K1 749 aa17.99■□□□□ 0.47
CDCA3-207ENST00000538862 TTC22Q5TAA0 569 aa17.99■□□□□ 0.47
CDCA3-207ENST00000538862 GSPT1P15170 499 aaKnown RBP17.98■□□□□ 0.47
CDCA3-207ENST00000538862 DDB1Q16531 1140 aa17.98■□□□□ 0.47
CDCA3-207ENST00000538862 KRT24Q2M2I5 525 aa17.98■□□□□ 0.47
CDCA3-207ENST00000538862 CEP85Q6P2H3 762 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms