RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 TRIM37O94972 964 aa18.39■□□□□ 0.53
CD4-208ENST00000538827 MPRIPQ6WCQ1 1025 aa18.39■□□□□ 0.53
CD4-208ENST00000538827 ZNF784Q8NCA9 323 aaPredicted RBP18.39■□□□□ 0.53
CD4-208ENST00000538827 TSR2Q969E8 191 aaKnown RBP18.39■□□□□ 0.53
CD4-208ENST00000538827 FANCIQ9NVI1 1328 aa18.39■□□□□ 0.53
CD4-208ENST00000538827 KDM6AO15550 1401 aaPredicted RBP18.39■□□□□ 0.53
CD4-208ENST00000538827 THSD7AQ9UPZ6 1657 aa18.38■□□□□ 0.53
CD4-208ENST00000538827 TOGARAM1Q9Y4F4 1720 aa18.38■□□□□ 0.53
CD4-208ENST00000538827 DUSP27Q5VZP5 1158 aa18.38■□□□□ 0.53
CD4-208ENST00000538827 DDX54Q8TDD1 881 aaKnown RBP18.38■□□□□ 0.53
CD4-208ENST00000538827 CDCA7Q9BWT1 371 aaPredicted RBP18.38■□□□□ 0.53
CD4-208ENST00000538827 KDM3BQ7LBC6 1761 aa18.37■□□□□ 0.53
CD4-208ENST00000538827 CYP27B1O15528 508 aa18.37■□□□□ 0.53
CD4-208ENST00000538827 RNMTO43148 476 aaKnown RBP18.37■□□□□ 0.53
CD4-208ENST00000538827 GNAI1P63096 354 aa18.37■□□□□ 0.53
CD4-208ENST00000538827 IFT57Q9NWB7 429 aa18.37■□□□□ 0.53
CD4-208ENST00000538827 DOT1LQ8TEK3 1739 aa18.37■□□□□ 0.53
CD4-208ENST00000538827 BARGINQ6ZT62 677 aa18.36■□□□□ 0.53
CD4-208ENST00000538827 IL17REQ8NFR9 667 aa18.36■□□□□ 0.53
CD4-208ENST00000538827 LGR6Q9HBX8 967 aa18.36■□□□□ 0.53
CD4-208ENST00000538827 MRC1P22897 1456 aa18.35■□□□□ 0.53
CD4-208ENST00000538827 CEMIPQ8WUJ3 1361 aa18.35■□□□□ 0.53
CD4-208ENST00000538827 HSP90AB1P08238 724 aaKnown RBP18.35■□□□□ 0.53
CD4-208ENST00000538827 TEFQ10587 303 aa18.35■□□□□ 0.53
CD4-208ENST00000538827 DDB1Q16531 1140 aa18.35■□□□□ 0.53
CD4-208ENST00000538827 EXOC5O00471 708 aa18.34■□□□□ 0.53
CD4-208ENST00000538827 C1QTNF8P60827 252 aa18.34■□□□□ 0.53
CD4-208ENST00000538827 TRMT2AQ8IZ69 625 aaKnown RBP18.33■□□□□ 0.52
CD4-208ENST00000538827 CFAP44Q96MT7 982 aa18.33■□□□□ 0.52
CD4-208ENST00000538827 MBIPQ9NS73 344 aa18.33■□□□□ 0.52
CD4-208ENST00000538827 TSPYL4Q9UJ04 414 aa18.33■□□□□ 0.52
CD4-208ENST00000538827 DCAF5Q96JK2 942 aa18.32■□□□□ 0.52
CD4-208ENST00000538827 ITGB4P16144 1822 aa18.32■□□□□ 0.52
CD4-208ENST00000538827 ZNF853P0CG23 659 aa18.31■□□□□ 0.52
CD4-208ENST00000538827 EXOSC9Q06265 439 aaKnown RBP18.31■□□□□ 0.52
CD4-208ENST00000538827 MIS18AQ9NYP9 233 aa18.31■□□□□ 0.52
CD4-208ENST00000538827 RREB1Q92766 1687 aa18.3■□□□□ 0.52
CD4-208ENST00000538827 KAT6BQ8WYB5 2073 aa18.3■□□□□ 0.52
CD4-208ENST00000538827 TAF7Q15545 349 aaPredicted RBP18.29■□□□□ 0.52
CD4-208ENST00000538827 SLC52A2Q9HAB3 445 aa18.29■□□□□ 0.52
CD4-208ENST00000538827 PAPPAQ13219 1627 aa18.28■□□□□ 0.52
CD4-208ENST00000538827 CHL1O00533 1208 aa18.28■□□□□ 0.52
CD4-208ENST00000538827 CABP4P57796 275 aa18.28■□□□□ 0.52
CD4-208ENST00000538827 RCAN3Q9UKA8 241 aa18.28■□□□□ 0.52
CD4-208ENST00000538827 NUP188Q5SRE5 1749 aa18.27■□□□□ 0.52
CD4-208ENST00000538827 BTBD11A6QL63 1104 aa18.27■□□□□ 0.52
CD4-208ENST00000538827 NKX1-1Q15270 411 aaPredicted RBP18.26■□□□□ 0.51
CD4-208ENST00000538827 KRT24Q2M2I5 525 aa18.24■□□□□ 0.51
CD4-208ENST00000538827 MARCH10Q8NA82 808 aaPredicted RBP18.24■□□□□ 0.51
CD4-208ENST00000538827 NFATC2IPQ8NCF5 419 aa18.24■□□□□ 0.51
CD4-208ENST00000538827 BABAM1Q9NWV8 329 aa18.24■□□□□ 0.51
CD4-208ENST00000538827 SUPT16HQ9Y5B9 1047 aaKnown RBP18.24■□□□□ 0.51
CD4-208ENST00000538827 C5P01031 1676 aa18.24■□□□□ 0.51
CD4-208ENST00000538827 UBR2Q8IWV8 1755 aa18.23■□□□□ 0.51
CD4-208ENST00000538827 ERVV-2B6SEH9 535 aa18.23■□□□□ 0.51
CD4-208ENST00000538827 ELL2O00472 640 aaPredicted RBP18.23■□□□□ 0.51
CD4-208ENST00000538827 TWISTNBQ3B726 338 aaPredicted RBP18.23■□□□□ 0.51
CD4-208ENST00000538827 TMOD3Q9NYL9 352 aa18.23■□□□□ 0.51
CD4-208ENST00000538827 KCNQ3O43525 872 aa18.22■□□□□ 0.51
CD4-208ENST00000538827 SLC39A6Q13433 755 aa18.22■□□□□ 0.51
CD4-208ENST00000538827 TTC5Q8N0Z6 440 aa18.22■□□□□ 0.51
CD4-208ENST00000538827 C8orf58Q8NAV2 365 aa18.22■□□□□ 0.51
CD4-208ENST00000538827 SYTL4Q96C24 671 aaPredicted RBP18.22■□□□□ 0.51
CD4-208ENST00000538827 LAMB4A4D0S4 1761 aa18.22■□□□□ 0.51
CD4-208ENST00000538827 NHSQ6T4R5 1651 aa18.22■□□□□ 0.51
CD4-208ENST00000538827 UTRNP46939 3433 aa18.21■□□□□ 0.51
CD4-208ENST00000538827 CT47B1P0C2W7 299 aaPredicted RBP18.21■□□□□ 0.51
CD4-208ENST00000538827 TSPYL6Q8N831 410 aa18.21■□□□□ 0.51
CD4-208ENST00000538827 ACSBG1Q96GR2 724 aa18.21■□□□□ 0.51
CD4-208ENST00000538827 BCL2L13Q9BXK5 485 aa18.2■□□□□ 0.5
CD4-208ENST00000538827 SMC4Q9NTJ3 1288 aa18.19■□□□□ 0.5
CD4-208ENST00000538827 SBF2Q86WG5 1849 aa18.19■□□□□ 0.5
CD4-208ENST00000538827 PLSCR1O15162 318 aa18.18■□□□□ 0.5
CD4-208ENST00000538827 NEFLP07196 543 aa18.18■□□□□ 0.5
CD4-208ENST00000538827 EIF4A1P60842 406 aaKnown RBP18.18■□□□□ 0.5
CD4-208ENST00000538827 KCPQ6ZWJ8 1503 aa18.18■□□□□ 0.5
CD4-208ENST00000538827 BCL9O00512 1426 aa18.17■□□□□ 0.5
CD4-208ENST00000538827 TCERG1O14776 1098 aaKnown RBP18.17■□□□□ 0.5
CD4-208ENST00000538827 BCAR3O75815 825 aa18.17■□□□□ 0.5
CD4-208ENST00000538827 CANXP27824 592 aaKnown RBP18.17■□□□□ 0.5
CD4-208ENST00000538827 PRIM1P49642 420 aaKnown RBP18.17■□□□□ 0.5
CD4-208ENST00000538827 RARSP54136 660 aaKnown RBP18.17■□□□□ 0.5
CD4-208ENST00000538827 RRP1P56182 461 aaKnown RBP18.17■□□□□ 0.5
CD4-208ENST00000538827 ZNF790Q6PG37 636 aa18.17■□□□□ 0.5
CD4-208ENST00000538827 CHD4Q14839 1912 aa18.17■□□□□ 0.5
CD4-208ENST00000538827 BTAF1O14981 1849 aa18.16■□□□□ 0.5
CD4-208ENST00000538827 VAMP4O75379 141 aa18.16■□□□□ 0.5
CD4-208ENST00000538827 SYT17Q9BSW7 474 aa18.16■□□□□ 0.5
CD4-208ENST00000538827 PTGER2P43116 358 aa18.15■□□□□ 0.5
CD4-208ENST00000538827 PIGBQ92521 554 aa18.15■□□□□ 0.5
CD4-208ENST00000538827 NECTIN2Q92692 538 aa18.15■□□□□ 0.5
CD4-208ENST00000538827 GIGYF1O75420 1035 aaPredicted RBP18.14■□□□□ 0.49
CD4-208ENST00000538827 IRX6P78412 446 aaPredicted RBP18.14■□□□□ 0.49
CD4-208ENST00000538827 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.14■□□□□ 0.49
CD4-208ENST00000538827 SSH1Q8WYL5 1049 aa18.14■□□□□ 0.49
CD4-208ENST00000538827 ZNF428Q96B54 188 aa18.14■□□□□ 0.49
CD4-208ENST00000538827 FMNL2Q96PY5 1086 aa18.14■□□□□ 0.49
CD4-208ENST00000538827 CEP350Q5VT06 3117 aa18.14■□□□□ 0.49
CD4-208ENST00000538827 PLIN1O60240 522 aa18.13■□□□□ 0.49
CD4-208ENST00000538827 ALDH1L2Q3SY69 923 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms