RNA–Protein interactions for RNA: ENST00000538625.1

C2CD3-212, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 819 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-212ENST00000538625 PCDH11XQ9BZA7 1347 aa9.91□□□□□ -0.82
C2CD3-212ENST00000538625 PCDH11YQ9BZA8 1340 aa9.91□□□□□ -0.82
C2CD3-212ENST00000538625 PPM1GO15355 546 aaPredicted RBP9.91□□□□□ -0.82
C2CD3-212ENST00000538625 MPRIPQ6WCQ1 1025 aa9.91□□□□□ -0.82
C2CD3-212ENST00000538625 PELP1Q8IZL8 1130 aaKnown RBP9.91□□□□□ -0.82
C2CD3-212ENST00000538625 NUDCQ9Y266 331 aa9.91□□□□□ -0.82
C2CD3-212ENST00000538625 DOT1LQ8TEK3 1739 aa9.9□□□□□ -0.82
C2CD3-212ENST00000538625 CHD4Q14839 1912 aa9.9□□□□□ -0.82
C2CD3-212ENST00000538625 ZNF521Q96K83 1311 aa9.9□□□□□ -0.82
C2CD3-212ENST00000538625 DIAPH1O60610 1272 aaKnown RBP9.9□□□□□ -0.82
C2CD3-212ENST00000538625 EMILIN1Q9Y6C2 1016 aa9.9□□□□□ -0.82
C2CD3-212ENST00000538625 IL13P35225 146 aa9.89□□□□□ -0.83
C2CD3-212ENST00000538625 COL23A1Q86Y22 540 aaPredicted RBP9.89□□□□□ -0.83
C2CD3-212ENST00000538625 FLAD1Q8NFF5 587 aa9.89□□□□□ -0.83
C2CD3-212ENST00000538625 SMARCC1Q92922 1105 aaPredicted RBP9.89□□□□□ -0.83
C2CD3-212ENST00000538625 RUNDC1Q96C34 613 aa9.89□□□□□ -0.83
C2CD3-212ENST00000538625 LY75O60449 1722 aa9.89□□□□□ -0.83
C2CD3-212ENST00000538625 QSER1Q2KHR3 1735 aa9.89□□□□□ -0.83
C2CD3-212ENST00000538625 SHANK3Q9BYB0 1731 aa9.88□□□□□ -0.83
C2CD3-212ENST00000538625 CYP27B1O15528 508 aa9.88□□□□□ -0.83
C2CD3-212ENST00000538625 PLEKHF1Q96S99 279 aa9.88□□□□□ -0.83
C2CD3-212ENST00000538625 SPG7Q9UQ90 795 aa9.88□□□□□ -0.83
C2CD3-212ENST00000538625 UTRNP46939 3433 aa9.88□□□□□ -0.83
C2CD3-212ENST00000538625 PALLDQ8WX93 1383 aa9.88□□□□□ -0.83
C2CD3-212ENST00000538625 FCHSD2O94868 740 aa9.87□□□□□ -0.83
C2CD3-212ENST00000538625 U2AF1L5P0DN76 240 aaPredicted RBP9.87□□□□□ -0.83
C2CD3-212ENST00000538625 U2AF1Q01081 240 aaKnown RBP eCLIP9.87□□□□□ -0.83
C2CD3-212ENST00000538625 APAF1O14727 1248 aa9.86□□□□□ -0.83
C2CD3-212ENST00000538625 GRIN3BO60391 1043 aa9.86□□□□□ -0.83
C2CD3-212ENST00000538625 CCDC27Q2M243 656 aa9.86□□□□□ -0.83
C2CD3-212ENST00000538625 MSL1Q68DK7 614 aa9.86□□□□□ -0.83
C2CD3-212ENST00000538625 NLGN2Q8NFZ4 835 aa9.86□□□□□ -0.83
C2CD3-212ENST00000538625 AK7Q96M32 723 aa9.86□□□□□ -0.83
C2CD3-212ENST00000538625 PNNQ9H307 717 aaKnown RBP9.86□□□□□ -0.83
C2CD3-212ENST00000538625 TUBGCP6Q96RT7 1819 aa9.85□□□□□ -0.83
C2CD3-212ENST00000538625 NKX1-1Q15270 411 aaPredicted RBP9.85□□□□□ -0.83
C2CD3-212ENST00000538625 CCDC146Q8IYE0 955 aa9.85□□□□□ -0.83
C2CD3-212ENST00000538625 PIGBQ92521 554 aa9.85□□□□□ -0.83
C2CD3-212ENST00000538625 EYA1Q99502 592 aa9.85□□□□□ -0.83
C2CD3-212ENST00000538625 RSPH6AQ9H0K4 717 aa9.85□□□□□ -0.83
C2CD3-212ENST00000538625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.85□□□□□ -0.83
C2CD3-212ENST00000538625 TMOD3Q9NYL9 352 aa9.85□□□□□ -0.83
C2CD3-212ENST00000538625 COL24A1Q17RW2 1714 aa9.85□□□□□ -0.83
C2CD3-212ENST00000538625 MAP2P11137 1827 aaKnown RBP9.84□□□□□ -0.83
C2CD3-212ENST00000538625 U2SURPO15042 1029 aaKnown RBP9.84□□□□□ -0.83
C2CD3-212ENST00000538625 POLA2Q14181 598 aa9.84□□□□□ -0.83
C2CD3-212ENST00000538625 EIF4A2Q14240 407 aaKnown RBP9.84□□□□□ -0.83
C2CD3-212ENST00000538625 TRMT2AQ8IZ69 625 aaKnown RBP9.84□□□□□ -0.83
C2CD3-212ENST00000538625 IFNL2Q8IZJ0 200 aa9.84□□□□□ -0.83
C2CD3-212ENST00000538625 CD2APQ9Y5K6 639 aa9.84□□□□□ -0.83
C2CD3-212ENST00000538625 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.83□□□□□ -0.84
C2CD3-212ENST00000538625 LOC102724428A0A0B4J2F2 783 aa9.83□□□□□ -0.84
C2CD3-212ENST00000538625 PHF14O94880 888 aa9.83□□□□□ -0.84
C2CD3-212ENST00000538625 SIK1P57059 783 aa9.83□□□□□ -0.84
C2CD3-212ENST00000538625 C1QTNF8P60827 252 aa9.83□□□□□ -0.84
C2CD3-212ENST00000538625 C5P01031 1676 aa9.83□□□□□ -0.84
C2CD3-212ENST00000538625 ITGB4P16144 1822 aa9.82□□□□□ -0.84
C2CD3-212ENST00000538625 SENP3-EIF4A1A0A087X0R7 540 aa9.82□□□□□ -0.84
C2CD3-212ENST00000538625 PHKG2P15735 406 aa9.82□□□□□ -0.84
C2CD3-212ENST00000538625 YBX3P16989 372 aaKnown RBP eCLIP9.82□□□□□ -0.84
C2CD3-212ENST00000538625 ATP6V1AP38606 617 aa9.82□□□□□ -0.84
C2CD3-212ENST00000538625 GOLGA2Q08379 1002 aa9.82□□□□□ -0.84
C2CD3-212ENST00000538625 WWC1Q8IX03 1113 aa9.82□□□□□ -0.84
C2CD3-212ENST00000538625 KDRP35968 1356 aa9.82□□□□□ -0.84
C2CD3-212ENST00000538625 NCAPD2Q15021 1401 aa9.82□□□□□ -0.84
C2CD3-212ENST00000538625 RNF123Q5XPI4 1314 aa9.82□□□□□ -0.84
C2CD3-212ENST00000538625 IGSF1Q8N6C5 1336 aa9.82□□□□□ -0.84
C2CD3-212ENST00000538625 GIGYF1O75420 1035 aaPredicted RBP9.81□□□□□ -0.84
C2CD3-212ENST00000538625 SSFA2P28290 1259 aa9.81□□□□□ -0.84
C2CD3-212ENST00000538625 TMPOP42166 694 aaKnown RBP9.81□□□□□ -0.84
C2CD3-212ENST00000538625 SLFN5Q08AF3 891 aa9.81□□□□□ -0.84
C2CD3-212ENST00000538625 WDR63Q8IWG1 891 aa9.81□□□□□ -0.84
C2CD3-212ENST00000538625 ASAP1Q9ULH1 1129 aa9.81□□□□□ -0.84
C2CD3-212ENST00000538625 GTF3C3Q9Y5Q9 886 aa9.81□□□□□ -0.84
C2CD3-212ENST00000538625 TAF1LQ8IZX4 1826 aa9.81□□□□□ -0.84
C2CD3-212ENST00000538625 PKD1L3Q7Z443 1732 aa9.81□□□□□ -0.84
C2CD3-212ENST00000538625 MAPK8IP3Q9UPT6 1336 aa9.81□□□□□ -0.84
C2CD3-212ENST00000538625 C4BP0C0L5 1744 aa9.8□□□□□ -0.84
C2CD3-212ENST00000538625 E9PSI1 815 aa9.8□□□□□ -0.84
C2CD3-212ENST00000538625 GNPATO15228 680 aa9.8□□□□□ -0.84
C2CD3-212ENST00000538625 HSP90AB1P08238 724 aaKnown RBP9.8□□□□□ -0.84
C2CD3-212ENST00000538625 PRKAR2BP31323 418 aa9.8□□□□□ -0.84
C2CD3-212ENST00000538625 PLEKHO1Q53GL0 409 aaPredicted RBP9.8□□□□□ -0.84
C2CD3-212ENST00000538625 DUSP27Q5VZP5 1158 aa9.8□□□□□ -0.84
C2CD3-212ENST00000538625 SMIM5Q71RC9 77 aa9.8□□□□□ -0.84
C2CD3-212ENST00000538625 LINC00116Q8NCU8 138 aa9.8□□□□□ -0.84
C2CD3-212ENST00000538625 CDCA7LQ96GN5 454 aa9.8□□□□□ -0.84
C2CD3-212ENST00000538625 ATG3Q9NT62 314 aa9.8□□□□□ -0.84
C2CD3-212ENST00000538625 SALL2Q9Y467 1007 aaPredicted RBP9.8□□□□□ -0.84
C2CD3-212ENST00000538625 TOGARAM1Q9Y4F4 1720 aa9.79□□□□□ -0.84
C2CD3-212ENST00000538625 ERVV-2B6SEH9 535 aa9.79□□□□□ -0.84
C2CD3-212ENST00000538625 ITPK1Q13572 414 aa9.79□□□□□ -0.84
C2CD3-212ENST00000538625 AMIGO3Q86WK7 504 aa9.79□□□□□ -0.84
C2CD3-212ENST00000538625 TRIM35Q9UPQ4 493 aa9.79□□□□□ -0.84
C2CD3-212ENST00000538625 IL16Q14005 1332 aa9.79□□□□□ -0.84
C2CD3-212ENST00000538625 HMOX1P09601 288 aa9.78□□□□□ -0.84
C2CD3-212ENST00000538625 NFE2L2Q16236 605 aa9.78□□□□□ -0.84
C2CD3-212ENST00000538625 AMOTQ4VCS5 1084 aa9.78□□□□□ -0.84
C2CD3-212ENST00000538625 TRAPPC3LQ5T215 181 aa9.78□□□□□ -0.84
C2CD3-212ENST00000538625 DCAF5Q96JK2 942 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms