RNA–Protein interactions for RNA: ENST00000538174.6

PTPRB-203, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best)

Gene PTPRB, Length 2,661 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-203ENST00000538174 PTMSP20962 102 aa8.75□□□□□ -1.01
PTPRB-203ENST00000538174 CCDC27Q2M243 656 aa8.75□□□□□ -1.01
PTPRB-203ENST00000538174 CCDC184Q52MB2 194 aa8.75□□□□□ -1.01
PTPRB-203ENST00000538174 KCNH5Q8NCM2 988 aa8.75□□□□□ -1.01
PTPRB-203ENST00000538174 TTC21AQ8NDW8 1320 aa8.75□□□□□ -1.01
PTPRB-203ENST00000538174 BBXQ8WY36 941 aaPredicted RBP8.75□□□□□ -1.01
PTPRB-203ENST00000538174 C5P01031 1676 aa8.74□□□□□ -1.01
PTPRB-203ENST00000538174 PRAM1Q96QH2 718 aa8.74□□□□□ -1.01
PTPRB-203ENST00000538174 RBM19Q9Y4C8 960 aaKnown RBP8.74□□□□□ -1.01
PTPRB-203ENST00000538174 USP6P35125 1406 aa8.74□□□□□ -1.01
PTPRB-203ENST00000538174 GPR162Q16538 588 aa8.74□□□□□ -1.01
PTPRB-203ENST00000538174 MS4A1P11836 297 aa8.73□□□□□ -1.01
PTPRB-203ENST00000538174 CCDC61Q9Y6R9 512 aa8.73□□□□□ -1.01
PTPRB-203ENST00000538174 LARP1Q6PKG0 1096 aaKnown RBP8.73□□□□□ -1.01
PTPRB-203ENST00000538174 NGDNQ8NEJ9 315 aaKnown RBP8.73□□□□□ -1.01
PTPRB-203ENST00000538174 TAF1LQ8IZX4 1826 aa8.72□□□□□ -1.01
PTPRB-203ENST00000538174 TOMM70O94826 608 aa8.72□□□□□ -1.01
PTPRB-203ENST00000538174 KLRG1Q96E93 195 aa8.72□□□□□ -1.01
PTPRB-203ENST00000538174 GPBP1L1Q9HC44 474 aaPredicted RBP8.72□□□□□ -1.01
PTPRB-203ENST00000538174 POGKQ9P215 609 aa8.72□□□□□ -1.01
PTPRB-203ENST00000538174 ANAPC15P60006 121 aa8.72□□□□□ -1.01
PTPRB-203ENST00000538174 SETQ01105 290 aaPredicted RBP8.72□□□□□ -1.01
PTPRB-203ENST00000538174 KDM4AO75164 1064 aa8.71□□□□□ -1.01
PTPRB-203ENST00000538174 ZNF521Q96K83 1311 aa8.71□□□□□ -1.02
PTPRB-203ENST00000538174 KIF3CO14782 793 aa8.71□□□□□ -1.02
PTPRB-203ENST00000538174 FAM9BQ8IZU0 186 aa8.71□□□□□ -1.02
PTPRB-203ENST00000538174 MARCH10Q8NA82 808 aaPredicted RBP8.71□□□□□ -1.02
PTPRB-203ENST00000538174 NUDT16Q96DE0 195 aaKnown RBP8.71□□□□□ -1.02
PTPRB-203ENST00000538174 GCP02774 474 aa8.7□□□□□ -1.02
PTPRB-203ENST00000538174 MCCP23508 829 aa8.7□□□□□ -1.02
PTPRB-203ENST00000538174 BRCA1P38398 1863 aaKnown RBP8.7□□□□□ -1.02
PTPRB-203ENST00000538174 ZBTB7AO95365 584 aa8.7□□□□□ -1.02
PTPRB-203ENST00000538174 TRMT2AQ8IZ69 625 aaKnown RBP8.7□□□□□ -1.02
PTPRB-203ENST00000538174 ANKRD36BQ8N2N9 1353 aa8.7□□□□□ -1.02
PTPRB-203ENST00000538174 CGNL1Q0VF96 1302 aa8.7□□□□□ -1.02
PTPRB-203ENST00000538174 THSD7BQ9C0I4 1608 aa8.69□□□□□ -1.02
PTPRB-203ENST00000538174 GTF2E1P29083 439 aaPredicted RBP8.69□□□□□ -1.02
PTPRB-203ENST00000538174 EXOC5O00471 708 aa8.69□□□□□ -1.02
PTPRB-203ENST00000538174 PNPLA7Q6ZV29 1317 aa8.69□□□□□ -1.02
PTPRB-203ENST00000538174 NBPF1Q3BBV0 1214 aa8.68□□□□□ -1.02
PTPRB-203ENST00000538174 TCERG1O14776 1098 aaKnown RBP8.68□□□□□ -1.02
PTPRB-203ENST00000538174 ARHGEF25Q86VW2 580 aa8.68□□□□□ -1.02
PTPRB-203ENST00000538174 STK26Q9P289 416 aa8.68□□□□□ -1.02
PTPRB-203ENST00000538174 DOT1LQ8TEK3 1739 aa8.68□□□□□ -1.02
PTPRB-203ENST00000538174 RRP1P56182 461 aaKnown RBP8.67□□□□□ -1.02
PTPRB-203ENST00000538174 PIAS4Q8N2W9 510 aaPredicted RBP8.67□□□□□ -1.02
PTPRB-203ENST00000538174 STRN4Q9NRL3 753 aa8.67□□□□□ -1.02
PTPRB-203ENST00000538174 ANKRD26Q9UPS8 1709 aa8.67□□□□□ -1.02
PTPRB-203ENST00000538174 ACEP12821 1306 aa8.67□□□□□ -1.02
PTPRB-203ENST00000538174 PTMAP06454 111 aaKnown RBP8.67□□□□□ -1.02
PTPRB-203ENST00000538174 PANK3Q9H999 370 aa8.67□□□□□ -1.02
PTPRB-203ENST00000538174 ATF5Q9Y2D1 282 aaPredicted RBP8.67□□□□□ -1.02
PTPRB-203ENST00000538174 RGPD5Q99666 1765 aa8.67□□□□□ -1.02
PTPRB-203ENST00000538174 UBR3Q6ZT12 1888 aa8.67□□□□□ -1.02
PTPRB-203ENST00000538174 OS9Q13438 667 aaPredicted RBP8.67□□□□□ -1.02
PTPRB-203ENST00000538174 GPATCH11Q8N954 259 aa8.67□□□□□ -1.02
PTPRB-203ENST00000538174 PMFBP1Q8TBY8 1022 aa8.67□□□□□ -1.02
PTPRB-203ENST00000538174 DNAJC2Q99543 621 aaKnown RBP8.67□□□□□ -1.02
PTPRB-203ENST00000538174 LMOD2Q6P5Q4 547 aa8.66□□□□□ -1.02
PTPRB-203ENST00000538174 TOGARAM1Q9Y4F4 1720 aa8.66□□□□□ -1.02
PTPRB-203ENST00000538174 MAFGO15525 162 aa8.66□□□□□ -1.02
PTPRB-203ENST00000538174 RCAN3Q9UKA8 241 aa8.66□□□□□ -1.02
PTPRB-203ENST00000538174 KNSTRNQ9Y448 316 aa8.66□□□□□ -1.02
PTPRB-203ENST00000538174 KDM6AO15550 1401 aaPredicted RBP8.65□□□□□ -1.02
PTPRB-203ENST00000538174 RGS19P49795 217 aa8.65□□□□□ -1.02
PTPRB-203ENST00000538174 FAM193AP78312 1265 aa8.65□□□□□ -1.02
PTPRB-203ENST00000538174 FAM182BQ5T319 152 aa8.65□□□□□ -1.02
PTPRB-203ENST00000538174 TMEM132EQ6IEE7 984 aa8.65□□□□□ -1.02
PTPRB-203ENST00000538174 LTN1O94822 1766 aa8.65□□□□□ -1.02
PTPRB-203ENST00000538174 PPP2R1AP30153 589 aa8.65□□□□□ -1.03
PTPRB-203ENST00000538174 TNS4Q8IZW8 715 aa8.65□□□□□ -1.03
PTPRB-203ENST00000538174 C4BP0C0L5 1744 aa8.65□□□□□ -1.03
PTPRB-203ENST00000538174 RTL1A6NKG5 1358 aa8.64□□□□□ -1.03
PTPRB-203ENST00000538174 KIF24Q5T7B8 1368 aa8.64□□□□□ -1.03
PTPRB-203ENST00000538174 YBX3P16989 372 aaKnown RBP eCLIP8.64□□□□□ -1.03
PTPRB-203ENST00000538174 TGFB2P61812 414 aa8.64□□□□□ -1.03
PTPRB-203ENST00000538174 CFAP70Q5T0N1 1121 aa8.64□□□□□ -1.03
PTPRB-203ENST00000538174 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.64□□□□□ -1.03
PTPRB-203ENST00000538174 DLEC1Q9Y238 1755 aa8.63□□□□□ -1.03
PTPRB-203ENST00000538174 NEFMP07197 916 aa8.63□□□□□ -1.03
PTPRB-203ENST00000538174 CT47B1P0C2W7 299 aaPredicted RBP8.63□□□□□ -1.03
PTPRB-203ENST00000538174 CHRNA2Q15822 529 aa8.63□□□□□ -1.03
PTPRB-203ENST00000538174 ZNF827Q17R98 1081 aa8.63□□□□□ -1.03
PTPRB-203ENST00000538174 ABTB2Q8N961 1025 aa8.63□□□□□ -1.03
PTPRB-203ENST00000538174 VIRMAQ69YN4 1812 aaKnown RBP8.62□□□□□ -1.03
PTPRB-203ENST00000538174 MAP3K19Q56UN5 1328 aa8.62□□□□□ -1.03
PTPRB-203ENST00000538174 PATL2C9JE40 543 aaKnown RBP8.62□□□□□ -1.03
PTPRB-203ENST00000538174 CANXP27824 592 aaKnown RBP8.62□□□□□ -1.03
PTPRB-203ENST00000538174 TOM1L2Q6ZVM7 507 aa8.62□□□□□ -1.03
PTPRB-203ENST00000538174 MAP2P11137 1827 aaKnown RBP8.62□□□□□ -1.03
PTPRB-203ENST00000538174 EP400Q96L91 3159 aa8.62□□□□□ -1.03
PTPRB-203ENST00000538174 NCAPD2Q15021 1401 aa8.61□□□□□ -1.03
PTPRB-203ENST00000538174 IL2RBP14784 551 aa8.61□□□□□ -1.03
PTPRB-203ENST00000538174 CDK19Q9BWU1 502 aa8.61□□□□□ -1.03
PTPRB-203ENST00000538174 CENPJQ9HC77 1338 aaPredicted RBP8.61□□□□□ -1.03
PTPRB-203ENST00000538174 ZC3H6P61129 1189 aaKnown RBP8.61□□□□□ -1.03
PTPRB-203ENST00000538174 C4AP0C0L4 1744 aa8.61□□□□□ -1.03
PTPRB-203ENST00000538174 KDM2BQ8NHM5 1336 aa8.6□□□□□ -1.03
PTPRB-203ENST00000538174 NUTM2FA1L443 756 aa8.6□□□□□ -1.03
PTPRB-203ENST00000538174 PAK3O75914 559 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms