RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 GJA5P36382 358 aa8.49□□□□□ -1.05
DDB1-210ENST00000538129 PUS10Q3MIT2 529 aaKnown RBP8.49□□□□□ -1.05
DDB1-210ENST00000538129 TMEM132EQ6IEE7 984 aa8.49□□□□□ -1.05
DDB1-210ENST00000538129 SPIRE2Q8WWL2 714 aa8.49□□□□□ -1.05
DDB1-210ENST00000538129 SETD1AO15047 1707 aaKnown RBP8.49□□□□□ -1.05
DDB1-210ENST00000538129 ABCC11Q96J66 1382 aa8.48□□□□□ -1.05
DDB1-210ENST00000538129 HOXA2O43364 376 aa8.48□□□□□ -1.05
DDB1-210ENST00000538129 TBC1D2Q9BYX2 928 aa8.48□□□□□ -1.05
DDB1-210ENST00000538129 C19orf44Q9H6X5 657 aa8.48□□□□□ -1.05
DDB1-210ENST00000538129 GPBP1L1Q9HC44 474 aaPredicted RBP8.48□□□□□ -1.05
DDB1-210ENST00000538129 LRPPRCP42704 1394 aaKnown RBP8.48□□□□□ -1.05
DDB1-210ENST00000538129 TONSLQ96HA7 1378 aa8.48□□□□□ -1.05
DDB1-210ENST00000538129 LAMC1P11047 1609 aa8.47□□□□□ -1.05
DDB1-210ENST00000538129 PRAG1Q86YV5 1406 aa8.47□□□□□ -1.05
DDB1-210ENST00000538129 UBAP1LF5GYI3 381 aa8.47□□□□□ -1.05
DDB1-210ENST00000538129 FDX1P10109 184 aa8.47□□□□□ -1.05
DDB1-210ENST00000538129 BRPF1P55201 1214 aaPredicted RBP8.47□□□□□ -1.05
DDB1-210ENST00000538129 STK26Q9P289 416 aa8.47□□□□□ -1.05
DDB1-210ENST00000538129 SLC27A5Q9Y2P5 690 aa8.47□□□□□ -1.05
DDB1-210ENST00000538129 XIRP1Q702N8 1843 aaKnown RBP8.47□□□□□ -1.05
DDB1-210ENST00000538129 YTHDC2Q9H6S0 1430 aaKnown RBP8.46□□□□□ -1.05
DDB1-210ENST00000538129 XRN1Q8IZH2 1706 aaKnown RBP8.46□□□□□ -1.05
DDB1-210ENST00000538129 SPDYE5A6NIY4 337 aa8.46□□□□□ -1.06
DDB1-210ENST00000538129 HOMEZQ8IX15 550 aa8.46□□□□□ -1.06
DDB1-210ENST00000538129 SPSB2Q99619 263 aa8.46□□□□□ -1.06
DDB1-210ENST00000538129 MSH6P52701 1360 aa8.46□□□□□ -1.06
DDB1-210ENST00000538129 ROBO2Q9HCK4 1378 aa8.46□□□□□ -1.06
DDB1-210ENST00000538129 KIAA1210Q9ULL0 1709 aa8.46□□□□□ -1.06
DDB1-210ENST00000538129 TECPR2O15040 1411 aa8.46□□□□□ -1.06
DDB1-210ENST00000538129 PTCH1Q13635 1447 aa8.46□□□□□ -1.06
DDB1-210ENST00000538129 ADH1BP00325 375 aa8.45□□□□□ -1.06
DDB1-210ENST00000538129 ATF3P18847 181 aa8.45□□□□□ -1.06
DDB1-210ENST00000538129 NBPF1Q3BBV0 1214 aa8.44□□□□□ -1.06
DDB1-210ENST00000538129 RIC3Q7Z5B4 369 aa8.44□□□□□ -1.06
DDB1-210ENST00000538129 WAPLQ7Z5K2 1190 aa8.44□□□□□ -1.06
DDB1-210ENST00000538129 ZNF516Q92618 1163 aa8.44□□□□□ -1.06
DDB1-210ENST00000538129 SLAIN2Q9P270 581 aa8.44□□□□□ -1.06
DDB1-210ENST00000538129 FAM135BQ49AJ0 1406 aa8.44□□□□□ -1.06
DDB1-210ENST00000538129 ADGRB1O14514 1584 aa8.44□□□□□ -1.06
DDB1-210ENST00000538129 C6orf229H3BNL8 230 aa8.43□□□□□ -1.06
DDB1-210ENST00000538129 NBPF8Q3BBV2 869 aa8.43□□□□□ -1.06
DDB1-210ENST00000538129 SLC6A16Q9GZN6 736 aa8.43□□□□□ -1.06
DDB1-210ENST00000538129 POGKQ9P215 609 aa8.43□□□□□ -1.06
DDB1-210ENST00000538129 TRAK1Q9UPV9 953 aa8.43□□□□□ -1.06
DDB1-210ENST00000538129 ASXL1Q8IXJ9 1541 aa8.43□□□□□ -1.06
DDB1-210ENST00000538129 MOXD2PA6NHM9 499 aa8.42□□□□□ -1.06
DDB1-210ENST00000538129 BRICD5Q6PL45 260 aa8.42□□□□□ -1.06
DDB1-210ENST00000538129 PRAM1Q96QH2 718 aa8.42□□□□□ -1.06
DDB1-210ENST00000538129 USB1Q9BQ65 265 aaKnown RBP8.42□□□□□ -1.06
DDB1-210ENST00000538129 FAM117AQ9C073 453 aa8.42□□□□□ -1.06
DDB1-210ENST00000538129 DLC1Q96QB1 1528 aa8.42□□□□□ -1.06
DDB1-210ENST00000538129 KNDC1Q76NI1 1749 aa8.42□□□□□ -1.06
DDB1-210ENST00000538129 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.41□□□□□ -1.06
DDB1-210ENST00000538129 DCCP43146 1447 aa8.41□□□□□ -1.06
DDB1-210ENST00000538129 ADGRL3Q9HAR2 1447 aa8.41□□□□□ -1.06
DDB1-210ENST00000538129 SPTLC1O15269 473 aa8.41□□□□□ -1.06
DDB1-210ENST00000538129 CLK2P49760 499 aaKnown RBP8.41□□□□□ -1.06
DDB1-210ENST00000538129 PIP4K2BP78356 416 aa8.41□□□□□ -1.06
DDB1-210ENST00000538129 MTMR2Q13614 643 aa8.41□□□□□ -1.06
DDB1-210ENST00000538129 SKIV2LQ15477 1246 aaKnown RBP8.41□□□□□ -1.06
DDB1-210ENST00000538129 TUSC1Q2TAM9 212 aa8.41□□□□□ -1.06
DDB1-210ENST00000538129 PRPF38BQ5VTL8 546 aaKnown RBP8.41□□□□□ -1.06
DDB1-210ENST00000538129 MYSM1Q5VVJ2 828 aa8.41□□□□□ -1.06
DDB1-210ENST00000538129 RSBN1LQ6PCB5 846 aaPredicted RBP8.41□□□□□ -1.06
DDB1-210ENST00000538129 RETREG3Q86VR2 466 aa8.41□□□□□ -1.06
DDB1-210ENST00000538129 ZBTB3Q9H5J0 574 aa8.41□□□□□ -1.06
DDB1-210ENST00000538129 GOPCQ9HD26 462 aa8.41□□□□□ -1.06
DDB1-210ENST00000538129 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.41□□□□□ -1.06
DDB1-210ENST00000538129 ROCK2O75116 1388 aaKnown RBP8.4□□□□□ -1.06
DDB1-210ENST00000538129 A0A0G2JS52 829 aa8.4□□□□□ -1.06
DDB1-210ENST00000538129 NUTM2BA6NNL0 878 aaPredicted RBP8.4□□□□□ -1.06
DDB1-210ENST00000538129 NUTM2EB1AL46 878 aaPredicted RBP8.4□□□□□ -1.06
DDB1-210ENST00000538129 RGS20O76081 388 aa8.4□□□□□ -1.06
DDB1-210ENST00000538129 MSS51Q4VC12 460 aa8.4□□□□□ -1.06
DDB1-210ENST00000538129 SH3D19Q5HYK7 790 aa8.4□□□□□ -1.06
DDB1-210ENST00000538129 NUTM2AQ8IVF1 878 aaPredicted RBP8.4□□□□□ -1.06
DDB1-210ENST00000538129 IL27Q8NEV9 243 aa8.4□□□□□ -1.06
DDB1-210ENST00000538129 PCMTD1Q96MG8 357 aaPredicted RBP8.4□□□□□ -1.06
DDB1-210ENST00000538129 TRPM1Q7Z4N2 1603 aa8.4□□□□□ -1.07
DDB1-210ENST00000538129 GPRASP1Q5JY77 1395 aa8.39□□□□□ -1.07
DDB1-210ENST00000538129 PLEKHH1Q9ULM0 1364 aa8.39□□□□□ -1.07
DDB1-210ENST00000538129 SOCS7O14512 581 aa8.39□□□□□ -1.07
DDB1-210ENST00000538129 NDUFV2P19404 249 aa8.39□□□□□ -1.07
DDB1-210ENST00000538129 CARD11Q9BXL7 1154 aa8.39□□□□□ -1.07
DDB1-210ENST00000538129 SAFB2Q14151 953 aaKnown RBP eCLIP8.38□□□□□ -1.07
DDB1-210ENST00000538129 PPP1R18Q6NYC8 613 aa8.38□□□□□ -1.07
DDB1-210ENST00000538129 THAP11Q96EK4 314 aa8.38□□□□□ -1.07
DDB1-210ENST00000538129 POLR3EQ9NVU0 708 aa8.38□□□□□ -1.07
DDB1-210ENST00000538129 NALCNQ8IZF0 1738 aa8.37□□□□□ -1.07
DDB1-210ENST00000538129 CENPJQ9HC77 1338 aaPredicted RBP8.37□□□□□ -1.07
DDB1-210ENST00000538129 TLL1O43897 1013 aa8.37□□□□□ -1.07
DDB1-210ENST00000538129 GUCA2AQ02747 115 aa8.37□□□□□ -1.07
DDB1-210ENST00000538129 NKX2-3Q8TAU0 364 aa8.37□□□□□ -1.07
DDB1-210ENST00000538129 RALGAPBQ86X10 1494 aa8.37□□□□□ -1.07
DDB1-210ENST00000538129 MST1RQ04912 1400 aa8.37□□□□□ -1.07
DDB1-210ENST00000538129 WASLO00401 505 aaPredicted RBP8.36□□□□□ -1.07
DDB1-210ENST00000538129 HSPA1LP34931 641 aa8.36□□□□□ -1.07
DDB1-210ENST00000538129 CSPP1Q1MSJ5 1256 aa8.36□□□□□ -1.07
DDB1-210ENST00000538129 RNF19BQ6ZMZ0 732 aa8.36□□□□□ -1.07
DDB1-210ENST00000538129 BRINP3Q76B58 766 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms