RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 LRCH2Q5VUJ6 765 aa10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 FILIP1Q7Z7B0 1213 aa10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 TMEM87AQ8NBN3 555 aa10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 EXOC4Q96A65 974 aa10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 TRPM1Q7Z4N2 1603 aa10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 CEP170Q5SW79 1584 aa10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 ACTN2P35609 894 aa10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 ZSCAN25Q6NSZ9 544 aa10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 LAMC1P11047 1609 aa10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 AP5Z1O43299 807 aa10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 NEMFO60524 1076 aa10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 CCDC192P0DO97 292 aa10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 TRHP20396 242 aaPredicted RBP10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 CLCN6P51797 869 aa10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 UBE2HP62256 183 aa10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 CASC1Q6TDU7 716 aa10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 MMS22LQ6ZRQ5 1243 aa10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 RNF217Q8TC41 542 aa10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 MAGI2Q86UL8 1455 aa10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 ST5P78524 1137 aa10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 INTS3Q68E01 1043 aaKnown RBP10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 ATF7IPQ6VMQ6 1270 aa10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 INTS4Q96HW7 963 aaKnown RBP10.11□□□□□ -0.79
SRGAP1-202ENST00000537556 ANKRD50Q9ULJ7 1429 aa10.1□□□□□ -0.79
SRGAP1-202ENST00000537556 WDR33Q9C0J8 1336 aaKnown RBP10.1□□□□□ -0.79
SRGAP1-202ENST00000537556 TRIM27P14373 513 aa10.1□□□□□ -0.79
SRGAP1-202ENST00000537556 SSR1P43307 286 aaKnown RBP10.1□□□□□ -0.79
SRGAP1-202ENST00000537556 LRMPQ12912 555 aa10.1□□□□□ -0.79
SRGAP1-202ENST00000537556 E2F4Q16254 413 aa10.1□□□□□ -0.79
SRGAP1-202ENST00000537556 TSGA10IPQ3SY00 556 aa10.1□□□□□ -0.79
SRGAP1-202ENST00000537556 FAM43BQ6ZT52 329 aaPredicted RBP10.1□□□□□ -0.79
SRGAP1-202ENST00000537556 FUCA2Q9BTY2 467 aa10.1□□□□□ -0.79
SRGAP1-202ENST00000537556 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.1□□□□□ -0.79
SRGAP1-202ENST00000537556 KIF3CO14782 793 aa10.1□□□□□ -0.79
SRGAP1-202ENST00000537556 ZRANB2O95218 330 aaKnown RBP eCLIP10.1□□□□□ -0.79
SRGAP1-202ENST00000537556 PRDM15P57071 1507 aaPredicted RBP10.09□□□□□ -0.79
SRGAP1-202ENST00000537556 CCDC189A1A4V9 331 aa10.09□□□□□ -0.79
SRGAP1-202ENST00000537556 ZRSR1Q15695 479 aaKnown RBP10.09□□□□□ -0.79
SRGAP1-202ENST00000537556 NEUROD2Q15784 382 aa10.09□□□□□ -0.79
SRGAP1-202ENST00000537556 CCDC27Q2M243 656 aa10.09□□□□□ -0.79
SRGAP1-202ENST00000537556 FAM200AQ8TCP9 573 aa10.09□□□□□ -0.79
SRGAP1-202ENST00000537556 RUNDC1Q96C34 613 aa10.09□□□□□ -0.79
SRGAP1-202ENST00000537556 WDR7Q9Y4E6 1490 aa10.09□□□□□ -0.79
SRGAP1-202ENST00000537556 DNAJC21Q5F1R6 531 aaKnown RBP10.09□□□□□ -0.79
SRGAP1-202ENST00000537556 NYAP1Q6ZVC0 841 aa10.09□□□□□ -0.79
SRGAP1-202ENST00000537556 TACO1Q9BSH4 297 aaKnown RBP10.09□□□□□ -0.79
SRGAP1-202ENST00000537556 EIF3CLB5ME19 914 aaKnown RBP10.08□□□□□ -0.8
SRGAP1-202ENST00000537556 NPHP1O15259 732 aa10.08□□□□□ -0.8
SRGAP1-202ENST00000537556 IPO8O15397 1037 aaKnown RBP10.08□□□□□ -0.8
SRGAP1-202ENST00000537556 USP8P40818 1118 aa10.08□□□□□ -0.8
SRGAP1-202ENST00000537556 SGSM3Q96HU1 749 aa10.08□□□□□ -0.8
SRGAP1-202ENST00000537556 TMX3Q96JJ7 454 aa10.08□□□□□ -0.8
SRGAP1-202ENST00000537556 EIF3CQ99613 913 aaKnown RBP10.08□□□□□ -0.8
SRGAP1-202ENST00000537556 PHF23Q9BUL5 403 aaPredicted RBP10.08□□□□□ -0.8
SRGAP1-202ENST00000537556 UBXN6Q9BZV1 441 aa10.08□□□□□ -0.8
SRGAP1-202ENST00000537556 GDPD2Q9HCC8 539 aa10.08□□□□□ -0.8
SRGAP1-202ENST00000537556 CCDC9Q9Y3X0 531 aaKnown RBP10.08□□□□□ -0.8
SRGAP1-202ENST00000537556 TPM1P09493 284 aa10.08□□□□□ -0.8
SRGAP1-202ENST00000537556 OAS2P29728 719 aaKnown RBP10.08□□□□□ -0.8
SRGAP1-202ENST00000537556 ERCC6LQ2NKX8 1250 aa10.08□□□□□ -0.8
SRGAP1-202ENST00000537556 LMAN1P49257 510 aa10.08□□□□□ -0.8
SRGAP1-202ENST00000537556 CUL4AQ13619 759 aa10.08□□□□□ -0.8
SRGAP1-202ENST00000537556 NUP160Q12769 1436 aa10.07□□□□□ -0.8
SRGAP1-202ENST00000537556 IRF6O14896 467 aa10.07□□□□□ -0.8
SRGAP1-202ENST00000537556 SMARCA5O60264 1052 aaPredicted RBP10.07□□□□□ -0.8
SRGAP1-202ENST00000537556 CPP00450 1065 aa10.07□□□□□ -0.8
SRGAP1-202ENST00000537556 SMC1AQ14683 1233 aaKnown RBP10.07□□□□□ -0.8
SRGAP1-202ENST00000537556 ARHGAP29Q52LW3 1261 aa10.07□□□□□ -0.8
SRGAP1-202ENST00000537556 GIMAP6Q6P9H5 292 aa10.07□□□□□ -0.8
SRGAP1-202ENST00000537556 DNAAF4Q8WXU2 420 aa10.07□□□□□ -0.8
SRGAP1-202ENST00000537556 TRIM5Q9C035 493 aa10.07□□□□□ -0.8
SRGAP1-202ENST00000537556 MKRN1Q9UHC7 482 aaKnown RBP10.07□□□□□ -0.8
SRGAP1-202ENST00000537556 FBXO3Q9UK99 471 aa10.07□□□□□ -0.8
SRGAP1-202ENST00000537556 ATP10AO60312 1499 aa10.07□□□□□ -0.8
SRGAP1-202ENST00000537556 TUBB4AP04350 444 aa10.07□□□□□ -0.8
SRGAP1-202ENST00000537556 EFCAB13Q8IY85 973 aa10.07□□□□□ -0.8
SRGAP1-202ENST00000537556 CASTP20810 708 aaKnown RBP10.06□□□□□ -0.8
SRGAP1-202ENST00000537556 CORO7P57737 925 aa10.06□□□□□ -0.8
SRGAP1-202ENST00000537556 TCP11L2Q8N4U5 519 aa10.06□□□□□ -0.8
SRGAP1-202ENST00000537556 UBXN4Q92575 508 aa10.06□□□□□ -0.8
SRGAP1-202ENST00000537556 L2HGDHQ9H9P8 463 aa10.06□□□□□ -0.8
SRGAP1-202ENST00000537556 ADAM21Q9UKJ8 722 aa10.06□□□□□ -0.8
SRGAP1-202ENST00000537556 SH3BP1Q9Y3L3 701 aa10.06□□□□□ -0.8
SRGAP1-202ENST00000537556 TMEM57Q8N5G2 664 aa10.06□□□□□ -0.8
SRGAP1-202ENST00000537556 EXOC6BQ9Y2D4 811 aa10.06□□□□□ -0.8
SRGAP1-202ENST00000537556 ATP6V1DQ9Y5K8 247 aa10.06□□□□□ -0.8
SRGAP1-202ENST00000537556 NUP155O75694 1391 aa10.06□□□□□ -0.8
SRGAP1-202ENST00000537556 POLR3AO14802 1390 aaPredicted RBP10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 CLSTN1O94985 981 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 NBPF9Q3BBW0 867 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 REXO1L1PQ8IX06 675 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 CACTINQ8WUQ7 758 aaKnown RBP10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 BSDC1Q9NW68 430 aaPredicted RBP10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 ITSN2Q9NZM3 1697 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 ERBB3P21860 1342 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 RPS6KA5O75582 802 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 LIG1P18858 919 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 ZNF75DP51815 510 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 NEK4P51957 841 aa10.05□□□□□ -0.8
SRGAP1-202ENST00000537556 FOXD4L6Q3SYB3 417 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms