RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 PAPPAQ13219 1627 aa11.33□□□□□ -0.6
DDB1-208ENST00000537120 ITGB4P16144 1822 aa11.32□□□□□ -0.6
DDB1-208ENST00000537120 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.32□□□□□ -0.6
DDB1-208ENST00000537120 GNPATO15228 680 aa11.32□□□□□ -0.6
DDB1-208ENST00000537120 DIAPH1O60610 1272 aaKnown RBP11.32□□□□□ -0.6
DDB1-208ENST00000537120 HMOX1P09601 288 aa11.32□□□□□ -0.6
DDB1-208ENST00000537120 SMIM5Q71RC9 77 aa11.32□□□□□ -0.6
DDB1-208ENST00000537120 NCAPD2Q15021 1401 aa11.32□□□□□ -0.6
DDB1-208ENST00000537120 PTCD1O75127 700 aaKnown RBP11.31□□□□□ -0.6
DDB1-208ENST00000537120 TRAPPC3LQ5T215 181 aa11.31□□□□□ -0.6
DDB1-208ENST00000537120 NFATC2IPQ8NCF5 419 aa11.31□□□□□ -0.6
DDB1-208ENST00000537120 LINC00116Q8NCU8 138 aa11.31□□□□□ -0.6
DDB1-208ENST00000537120 PKD1L3Q7Z443 1732 aa11.3□□□□□ -0.6
DDB1-208ENST00000537120 U2SURPO15042 1029 aaKnown RBP11.3□□□□□ -0.6
DDB1-208ENST00000537120 PER1O15534 1290 aaPredicted RBP11.3□□□□□ -0.6
DDB1-208ENST00000537120 SSFA2P28290 1259 aa11.3□□□□□ -0.6
DDB1-208ENST00000537120 ITPK1Q13572 414 aa11.3□□□□□ -0.6
DDB1-208ENST00000537120 RTCBQ9Y3I0 505 aaKnown RBP11.3□□□□□ -0.6
DDB1-208ENST00000537120 GRIN3BO60391 1043 aa11.29□□□□□ -0.6
DDB1-208ENST00000537120 AKAP4Q5JQC9 854 aa11.29□□□□□ -0.6
DDB1-208ENST00000537120 NLGN2Q8NFZ4 835 aa11.29□□□□□ -0.6
DDB1-208ENST00000537120 QSER1Q2KHR3 1735 aa11.29□□□□□ -0.6
DDB1-208ENST00000537120 MAP3K5Q99683 1374 aa11.28□□□□□ -0.6
DDB1-208ENST00000537120 C5P01031 1676 aa11.28□□□□□ -0.6
DDB1-208ENST00000537120 RFC4P35249 363 aa11.28□□□□□ -0.6
DDB1-208ENST00000537120 CFAP53Q96M91 514 aa11.28□□□□□ -0.6
DDB1-208ENST00000537120 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
DDB1-208ENST00000537120 CD2APQ9Y5K6 639 aa11.28□□□□□ -0.6
DDB1-208ENST00000537120 PLEKHG2Q9H7P9 1386 aa11.28□□□□□ -0.6
DDB1-208ENST00000537120 RC3H1Q5TC82 1133 aaKnown RBP11.27□□□□□ -0.61
DDB1-208ENST00000537120 TUBGCP6Q96RT7 1819 aa11.27□□□□□ -0.61
DDB1-208ENST00000537120 C4BP0C0L5 1744 aa11.26□□□□□ -0.61
DDB1-208ENST00000537120 TOGARAM1Q9Y4F4 1720 aa11.26□□□□□ -0.61
DDB1-208ENST00000537120 AMIGO3Q86WK7 504 aa11.26□□□□□ -0.61
DDB1-208ENST00000537120 NLGN1Q8N2Q7 840 aa11.26□□□□□ -0.61
DDB1-208ENST00000537120 LGR6Q9HBX8 967 aa11.26□□□□□ -0.61
DDB1-208ENST00000537120 TAF1LQ8IZX4 1826 aa11.25□□□□□ -0.61
DDB1-208ENST00000537120 RPS6KA4O75676 772 aa11.25□□□□□ -0.61
DDB1-208ENST00000537120 MTHFSDQ2M296 383 aaKnown RBP11.25□□□□□ -0.61
DDB1-208ENST00000537120 ARHGEF1Q92888 912 aaKnown RBP11.25□□□□□ -0.61
DDB1-208ENST00000537120 NUDCQ9Y266 331 aa11.25□□□□□ -0.61
DDB1-208ENST00000537120 RNMTO43148 476 aaKnown RBP11.24□□□□□ -0.61
DDB1-208ENST00000537120 MMP10P09238 476 aa11.24□□□□□ -0.61
DDB1-208ENST00000537120 ZNF784Q8NCA9 323 aaPredicted RBP11.24□□□□□ -0.61
DDB1-208ENST00000537120 SLC4A9Q96Q91 983 aa11.24□□□□□ -0.61
DDB1-208ENST00000537120 SLC52A2Q9HAB3 445 aa11.24□□□□□ -0.61
DDB1-208ENST00000537120 WWC3Q9ULE0 1092 aa11.24□□□□□ -0.61
DDB1-208ENST00000537120 PARP3Q9Y6F1 533 aa11.24□□□□□ -0.61
DDB1-208ENST00000537120 KDRP35968 1356 aa11.24□□□□□ -0.61
DDB1-208ENST00000537120 KDM6AO15550 1401 aaPredicted RBP11.24□□□□□ -0.61
DDB1-208ENST00000537120 HOXD11P31277 338 aaPredicted RBP11.23□□□□□ -0.61
DDB1-208ENST00000537120 CRKLP46109 303 aaKnown RBP11.23□□□□□ -0.61
DDB1-208ENST00000537120 TEFQ10587 303 aa11.23□□□□□ -0.61
DDB1-208ENST00000537120 SLC39A6Q13433 755 aa11.23□□□□□ -0.61
DDB1-208ENST00000537120 CNTNAP4Q9C0A0 1308 aa11.23□□□□□ -0.61
DDB1-208ENST00000537120 ZPR1O75312 459 aa11.22□□□□□ -0.61
DDB1-208ENST00000537120 YBX3P16989 372 aaKnown RBP eCLIP11.22□□□□□ -0.614e-9■■■□□ 14.8
DDB1-208ENST00000537120 UTRNP46939 3433 aa11.22□□□□□ -0.61
DDB1-208ENST00000537120 CHD4Q14839 1912 aa11.22□□□□□ -0.61
DDB1-208ENST00000537120 TTC5Q8N0Z6 440 aa11.22□□□□□ -0.61
DDB1-208ENST00000537120 GAS2L2Q8NHY3 880 aa11.22□□□□□ -0.61
DDB1-208ENST00000537120 CCDC87Q9NVE4 849 aa11.22□□□□□ -0.61
DDB1-208ENST00000537120 NPC1L1Q9UHC9 1359 aa11.22□□□□□ -0.61
DDB1-208ENST00000537120 GNAT3A8MTJ3 354 aa11.21□□□□□ -0.61
DDB1-208ENST00000537120 NEFMP07197 916 aa11.21□□□□□ -0.61
DDB1-208ENST00000537120 U2AF1L5P0DN76 240 aaPredicted RBP11.21□□□□□ -0.61
DDB1-208ENST00000537120 U2AF1Q01081 240 aaKnown RBP eCLIP11.21□□□□□ -0.613e-7■□□□□ 8
DDB1-208ENST00000537120 DNAJC10Q8IXB1 793 aa11.21□□□□□ -0.61
DDB1-208ENST00000537120 UBR3Q6ZT12 1888 aa11.21□□□□□ -0.62
DDB1-208ENST00000537120 NPM2Q86SE8 214 aaKnown RBP11.2□□□□□ -0.62
DDB1-208ENST00000537120 COL24A1Q17RW2 1714 aa11.2□□□□□ -0.62
DDB1-208ENST00000537120 A0A0G2JLW4 131 aa11.19□□□□□ -0.62
DDB1-208ENST00000537120 STARD3NLO95772 234 aa11.19□□□□□ -0.62
DDB1-208ENST00000537120 GYS1P13807 737 aa11.19□□□□□ -0.62
DDB1-208ENST00000537120 PPP2R1AP30153 589 aa11.19□□□□□ -0.62
DDB1-208ENST00000537120 PRKAR2BP31323 418 aa11.19□□□□□ -0.62
DDB1-208ENST00000537120 INTS5Q6P9B9 1019 aaKnown RBP11.19□□□□□ -0.62
DDB1-208ENST00000537120 RTF1Q92541 710 aaKnown RBP11.19□□□□□ -0.62
DDB1-208ENST00000537120 SRP68Q9UHB9 627 aaKnown RBP11.19□□□□□ -0.62
DDB1-208ENST00000537120 CANXP27824 592 aaKnown RBP11.18□□□□□ -0.62
DDB1-208ENST00000537120 TGFB2P61812 414 aa11.18□□□□□ -0.62
DDB1-208ENST00000537120 BCS1LQ9Y276 419 aa11.18□□□□□ -0.62
DDB1-208ENST00000537120 CYP19A1P11511 503 aaPredicted RBP11.17□□□□□ -0.62
DDB1-208ENST00000537120 FKBP8Q14318 412 aa11.17□□□□□ -0.62
DDB1-208ENST00000537120 ARHGAP27Q6ZUM4 889 aa11.17□□□□□ -0.62
DDB1-208ENST00000537120 IL17REQ8NFR9 667 aa11.17□□□□□ -0.62
DDB1-208ENST00000537120 TEX13AQ9BXU3 409 aaPredicted RBP11.17□□□□□ -0.62
DDB1-208ENST00000537120 ZNF330Q9Y3S2 320 aaPredicted RBP11.17□□□□□ -0.62
DDB1-208ENST00000537120 SCN11AQ9UI33 1791 aa11.16□□□□□ -0.62
DDB1-208ENST00000537120 BTBD11A6QL63 1104 aa11.16□□□□□ -0.62
DDB1-208ENST00000537120 GIGYF1O75420 1035 aaPredicted RBP11.16□□□□□ -0.62
DDB1-208ENST00000537120 FCHSD2O94868 740 aa11.16□□□□□ -0.62
DDB1-208ENST00000537120 DPEP1P16444 411 aa11.16□□□□□ -0.62
DDB1-208ENST00000537120 USPL1Q5W0Q7 1092 aa11.16□□□□□ -0.62
DDB1-208ENST00000537120 VSIG10Q8N0Z9 540 aa11.16□□□□□ -0.62
DDB1-208ENST00000537120 PHACTR3Q96KR7 559 aa11.16□□□□□ -0.62
DDB1-208ENST00000537120 USP42Q9H9J4 1324 aaKnown RBP11.15□□□□□ -0.62
DDB1-208ENST00000537120 A0A087WZG4 1122 aa11.15□□□□□ -0.62
DDB1-208ENST00000537120 ZNF790Q6PG37 636 aa11.15□□□□□ -0.62
DDB1-208ENST00000537120 ZNF526Q8TF50 670 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms