RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 TSPYL6Q8N831 410 aa16.57■□□□□ 0.24
CDK5RAP3-202ENST00000536708 DOT1LQ8TEK3 1739 aa16.57■□□□□ 0.24
CDK5RAP3-202ENST00000536708 BCL2L13Q9BXK5 485 aa16.57■□□□□ 0.24
CDK5RAP3-202ENST00000536708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.57■□□□□ 0.248e-10■□□□□ 11
CDK5RAP3-202ENST00000536708 ITGB4P16144 1822 aa16.57■□□□□ 0.24
CDK5RAP3-202ENST00000536708 KAT6BQ8WYB5 2073 aa16.57■□□□□ 0.24
CDK5RAP3-202ENST00000536708 PCDH11XQ9BZA7 1347 aa16.57■□□□□ 0.24
CDK5RAP3-202ENST00000536708 PCDH11YQ9BZA8 1340 aa16.57■□□□□ 0.24
CDK5RAP3-202ENST00000536708 TNS2Q63HR2 1409 aa16.57■□□□□ 0.24
CDK5RAP3-202ENST00000536708 RNMTO43148 476 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-202ENST00000536708 ZCRB1Q8TBF4 217 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-202ENST00000536708 ELL2O00472 640 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-202ENST00000536708 CHL1O00533 1208 aa16.56■□□□□ 0.24
CDK5RAP3-202ENST00000536708 FNBP4Q8N3X1 1017 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-202ENST00000536708 AFF2P51816 1311 aa16.56■□□□□ 0.24
CDK5RAP3-202ENST00000536708 BCAR3O75815 825 aa16.55■□□□□ 0.24
CDK5RAP3-202ENST00000536708 IFNL2Q8IZJ0 200 aa16.55■□□□□ 0.24
CDK5RAP3-202ENST00000536708 DDX54Q8TDD1 881 aaKnown RBP16.55■□□□□ 0.24
CDK5RAP3-202ENST00000536708 ZBTB47Q9UFB7 747 aaPredicted RBP16.55■□□□□ 0.24
CDK5RAP3-202ENST00000536708 TSPYL4Q9UJ04 414 aa16.55■□□□□ 0.24
CDK5RAP3-202ENST00000536708 USP21Q9UK80 565 aa16.55■□□□□ 0.24
CDK5RAP3-202ENST00000536708 NBR1Q14596 966 aa16.55■□□□□ 0.24
CDK5RAP3-202ENST00000536708 C8orf58Q8NAV2 365 aa16.55■□□□□ 0.24
CDK5RAP3-202ENST00000536708 C5P01031 1676 aa16.55■□□□□ 0.24
CDK5RAP3-202ENST00000536708 THSD7AQ9UPZ6 1657 aa16.54■□□□□ 0.24
CDK5RAP3-202ENST00000536708 TEFQ10587 303 aa16.53■□□□□ 0.24
CDK5RAP3-202ENST00000536708 PDE3AQ14432 1141 aa16.53■□□□□ 0.24
CDK5RAP3-202ENST00000536708 PAPPAQ13219 1627 aa16.53■□□□□ 0.24
CDK5RAP3-202ENST00000536708 RARSP54136 660 aaKnown RBP16.52■□□□□ 0.24
CDK5RAP3-202ENST00000536708 VPS72Q15906 364 aa16.52■□□□□ 0.24
CDK5RAP3-202ENST00000536708 FAM98CQ17RN3 349 aaKnown RBP16.52■□□□□ 0.24
CDK5RAP3-202ENST00000536708 KCNQ3O43525 872 aa16.51■□□□□ 0.23
CDK5RAP3-202ENST00000536708 TAF7Q15545 349 aaPredicted RBP16.51■□□□□ 0.23
CDK5RAP3-202ENST00000536708 UBR2Q8IWV8 1755 aa16.51■□□□□ 0.23
CDK5RAP3-202ENST00000536708 TWISTNBQ3B726 338 aaPredicted RBP16.51■□□□□ 0.23
CDK5RAP3-202ENST00000536708 DCAF5Q96JK2 942 aa16.51■□□□□ 0.23
CDK5RAP3-202ENST00000536708 EP400Q96L91 3159 aa16.5■□□□□ 0.23
CDK5RAP3-202ENST00000536708 SLC52A2Q9HAB3 445 aa16.49■□□□□ 0.23
CDK5RAP3-202ENST00000536708 ATRNO75882 1429 aa16.49■□□□□ 0.23
CDK5RAP3-202ENST00000536708 BTBD11A6QL63 1104 aa16.49■□□□□ 0.23
CDK5RAP3-202ENST00000536708 NFATC2IPQ8NCF5 419 aa16.49■□□□□ 0.23
CDK5RAP3-202ENST00000536708 SSH1Q8WYL5 1049 aa16.49■□□□□ 0.23
CDK5RAP3-202ENST00000536708 THRAP3Q9Y2W1 955 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-202ENST00000536708 VAMP4O75379 141 aa16.48■□□□□ 0.23
CDK5RAP3-202ENST00000536708 SLC39A6Q13433 755 aa16.47■□□□□ 0.23
CDK5RAP3-202ENST00000536708 AAMPQ13685 434 aa16.47■□□□□ 0.23
CDK5RAP3-202ENST00000536708 BARGINQ6ZT62 677 aa16.47■□□□□ 0.23
CDK5RAP3-202ENST00000536708 SMC4Q9NTJ3 1288 aa16.47■□□□□ 0.23
CDK5RAP3-202ENST00000536708 TNNQ9UQP3 1299 aa16.47■□□□□ 0.23
CDK5RAP3-202ENST00000536708 BRWD3Q6RI45 1802 aa16.47■□□□□ 0.23
CDK5RAP3-202ENST00000536708 DDB1Q16531 1140 aa16.47■□□□□ 0.23
CDK5RAP3-202ENST00000536708 A0A0G2JS52 829 aa16.46■□□□□ 0.23
CDK5RAP3-202ENST00000536708 HSP90AB1P08238 724 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-202ENST00000536708 NKX1-1Q15270 411 aaPredicted RBP16.46■□□□□ 0.23
CDK5RAP3-202ENST00000536708 RTL5Q5HYW3 569 aaPredicted RBP16.46■□□□□ 0.23
CDK5RAP3-202ENST00000536708 FBXO41Q8TF61 875 aa16.46■□□□□ 0.23
CDK5RAP3-202ENST00000536708 FRAT1Q92837 279 aaPredicted RBP16.46■□□□□ 0.23
CDK5RAP3-202ENST00000536708 LAMB4A4D0S4 1761 aa16.46■□□□□ 0.23
CDK5RAP3-202ENST00000536708 EXOC5O00471 708 aa16.46■□□□□ 0.22
CDK5RAP3-202ENST00000536708 CT47B1P0C2W7 299 aaPredicted RBP16.46■□□□□ 0.22
CDK5RAP3-202ENST00000536708 CABP4P57796 275 aa16.44■□□□□ 0.22
CDK5RAP3-202ENST00000536708 EIF4A1P60842 406 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-202ENST00000536708 MARCH10Q8NA82 808 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-202ENST00000536708 NECTIN2Q92692 538 aa16.44■□□□□ 0.22
CDK5RAP3-202ENST00000536708 CDCA7Q9BWT1 371 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-202ENST00000536708 KCPQ6ZWJ8 1503 aa16.44■□□□□ 0.22
CDK5RAP3-202ENST00000536708 PRAMEF22A3QJZ6 481 aa16.44■□□□□ 0.22
CDK5RAP3-202ENST00000536708 FAM161AQ3B820 660 aa16.44■□□□□ 0.22
CDK5RAP3-202ENST00000536708 DDRGK1Q96HY6 314 aa16.44■□□□□ 0.22
CDK5RAP3-202ENST00000536708 CACNA1FO60840 1977 aa16.43■□□□□ 0.22
CDK5RAP3-202ENST00000536708 SKAP1Q86WV1 359 aa16.43■□□□□ 0.22
CDK5RAP3-202ENST00000536708 GJD4Q96KN9 370 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-202ENST00000536708 BABAM1Q9NWV8 329 aa16.43■□□□□ 0.22
CDK5RAP3-202ENST00000536708 CANXP27824 592 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-202ENST00000536708 ZNF790Q6PG37 636 aa16.42■□□□□ 0.22
CDK5RAP3-202ENST00000536708 NPM2Q86SE8 214 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-202ENST00000536708 TRPC5Q9UL62 973 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-202ENST00000536708 SBF2Q86WG5 1849 aa16.41■□□□□ 0.22
CDK5RAP3-202ENST00000536708 C8orf34Q49A92 452 aa16.41■□□□□ 0.22
CDK5RAP3-202ENST00000536708 FAM182BQ5T319 152 aa16.41■□□□□ 0.22
CDK5RAP3-202ENST00000536708 ERVV-2B6SEH9 535 aa16.4■□□□□ 0.22
CDK5RAP3-202ENST00000536708 RLBP1P12271 317 aa16.4■□□□□ 0.22
CDK5RAP3-202ENST00000536708 ALDH1L2Q3SY69 923 aa16.4■□□□□ 0.22
CDK5RAP3-202ENST00000536708 MRPL50Q8N5N7 158 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-202ENST00000536708 CLUAP1Q96AJ1 413 aa16.4■□□□□ 0.22
CDK5RAP3-202ENST00000536708 ZNF496Q96IT1 587 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-202ENST00000536708 HEG1Q9ULI3 1381 aa16.4■□□□□ 0.22
CDK5RAP3-202ENST00000536708 PANK1Q8TE04 598 aa16.4■□□□□ 0.22
CDK5RAP3-202ENST00000536708 SYTL4Q96C24 671 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP3-202ENST00000536708 ACSBG1Q96GR2 724 aa16.4■□□□□ 0.22
CDK5RAP3-202ENST00000536708 QTRT2Q9H974 415 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-202ENST00000536708 TMOD3Q9NYL9 352 aa16.4■□□□□ 0.22
CDK5RAP3-202ENST00000536708 BCL9O00512 1426 aa16.39■□□□□ 0.21
CDK5RAP3-202ENST00000536708 NOB1Q9ULX3 412 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP3-202ENST00000536708 PIGBQ92521 554 aa16.38■□□□□ 0.21
CDK5RAP3-202ENST00000536708 KIF16BQ96L93 1317 aa16.38■□□□□ 0.21
CDK5RAP3-202ENST00000536708 BTAF1O14981 1849 aa16.38■□□□□ 0.21
CDK5RAP3-202ENST00000536708 NHSQ6T4R5 1651 aa16.38■□□□□ 0.21
CDK5RAP3-202ENST00000536708 IGHDP01880 384 aa16.38■□□□□ 0.21
CDK5RAP3-202ENST00000536708 TRIM27P14373 513 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms