RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 EIF4A1P60842 406 aaKnown RBP28.61■■■□□ 2.17
HMGA2-206ENST00000536545 TEFQ10587 303 aa28.61■■■□□ 2.17
HMGA2-206ENST00000536545 ATP10DQ9P241 1426 aa28.61■■■□□ 2.17
HMGA2-206ENST00000536545 PKD1L3Q7Z443 1732 aa28.61■■■□□ 2.17
HMGA2-206ENST00000536545 SIRT2Q8IXJ6 389 aa28.6■■■□□ 2.17
HMGA2-206ENST00000536545 HOXB7P09629 217 aa28.6■■■□□ 2.17
HMGA2-206ENST00000536545 RAPGEF4Q8WZA2 1011 aa28.6■■■□□ 2.17
HMGA2-206ENST00000536545 NUCB1Q02818 461 aa28.59■■■□□ 2.17
HMGA2-206ENST00000536545 FLIIQ13045 1269 aa28.58■■■□□ 2.17
HMGA2-206ENST00000536545 IPO9Q96P70 1041 aaKnown RBP28.58■■■□□ 2.17
HMGA2-206ENST00000536545 PXDNLA1KZ92 1463 aa28.57■■■□□ 2.16
HMGA2-206ENST00000536545 NPM2Q86SE8 214 aaKnown RBP28.57■■■□□ 2.16
HMGA2-206ENST00000536545 SCN11AQ9UI33 1791 aa28.57■■■□□ 2.16
HMGA2-206ENST00000536545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.57■■■□□ 2.16
HMGA2-206ENST00000536545 BTBD11A6QL63 1104 aa28.56■■■□□ 2.16
HMGA2-206ENST00000536545 CSB-PGBD3P0DP91 1061 aa28.56■■■□□ 2.16
HMGA2-206ENST00000536545 TATP17735 454 aaPredicted RBP28.56■■■□□ 2.16
HMGA2-206ENST00000536545 HDGFL1Q5TGJ6 251 aa28.56■■■□□ 2.16
HMGA2-206ENST00000536545 GCC1Q96CN9 775 aa28.56■■■□□ 2.16
HMGA2-206ENST00000536545 KDM6AO15550 1401 aaPredicted RBP28.56■■■□□ 2.16
HMGA2-206ENST00000536545 KCNQ3O43525 872 aa28.55■■■□□ 2.16
HMGA2-206ENST00000536545 CCT4P50991 539 aaKnown RBP28.55■■■□□ 2.16
HMGA2-206ENST00000536545 F6X3S4 739 aa28.54■■■□□ 2.16
HMGA2-206ENST00000536545 NECTIN2Q92692 538 aa28.54■■■□□ 2.16
HMGA2-206ENST00000536545 HEG1Q9ULI3 1381 aa28.53■■■□□ 2.16
HMGA2-206ENST00000536545 MRC1P22897 1456 aa28.52■■■□□ 2.16
HMGA2-206ENST00000536545 MEIS3Q99687 375 aa28.52■■■□□ 2.16
HMGA2-206ENST00000536545 SPG7Q9UQ90 795 aa28.52■■■□□ 2.16
HMGA2-206ENST00000536545 COL5A2P05997 1499 aaPredicted RBP28.51■■■□□ 2.15
HMGA2-206ENST00000536545 PHKG2P15735 406 aa28.51■■■□□ 2.15
HMGA2-206ENST00000536545 FKBP5Q13451 457 aaPredicted RBP28.51■■■□□ 2.15
HMGA2-206ENST00000536545 CHD1LQ86WJ1 897 aa28.51■■■□□ 2.15
HMGA2-206ENST00000536545 ANKRD44Q8N8A2 993 aa28.51■■■□□ 2.15
HMGA2-206ENST00000536545 PRDM11Q9NQV5 511 aa28.51■■■□□ 2.15
HMGA2-206ENST00000536545 PARP4Q9UKK3 1724 aaKnown RBP28.5■■■□□ 2.15
HMGA2-206ENST00000536545 CEP85Q6P2H3 762 aa28.49■■■□□ 2.15
HMGA2-206ENST00000536545 SLC4A10Q6U841 1118 aa28.49■■■□□ 2.15
HMGA2-206ENST00000536545 CHMP4AQ9BY43 222 aa28.49■■■□□ 2.15
HMGA2-206ENST00000536545 WDR17Q8IZU2 1322 aa28.48■■■□□ 2.15
HMGA2-206ENST00000536545 RPAP2Q8IXW5 612 aaPredicted RBP28.47■■■□□ 2.15
HMGA2-206ENST00000536545 LNPKQ9C0E8 428 aa28.47■■■□□ 2.15
HMGA2-206ENST00000536545 NOP58Q9Y2X3 529 aaKnown RBP28.47■■■□□ 2.15
HMGA2-206ENST00000536545 IFNL2Q8IZJ0 200 aa28.45■■■□□ 2.14
HMGA2-206ENST00000536545 EIF2S2P20042 333 aaKnown RBP28.44■■■□□ 2.14
HMGA2-206ENST00000536545 DCTPP1Q9H773 170 aa28.44■■■□□ 2.14
HMGA2-206ENST00000536545 SLC52A2Q9HAB3 445 aa28.44■■■□□ 2.14
HMGA2-206ENST00000536545 CHPF2Q9P2E5 772 aa28.44■■■□□ 2.14
HMGA2-206ENST00000536545 GIGYF1O75420 1035 aaPredicted RBP28.43■■■□□ 2.14
HMGA2-206ENST00000536545 ANKRD45Q5TZF3 282 aa28.43■■■□□ 2.14
HMGA2-206ENST00000536545 PHAXQ9H814 394 aaKnown RBP28.43■■■□□ 2.14
HMGA2-206ENST00000536545 CYP27B1O15528 508 aa28.42■■■□□ 2.14
HMGA2-206ENST00000536545 AHDC1Q5TGY3 1603 aaPredicted RBP28.41■■■□□ 2.14
HMGA2-206ENST00000536545 ROBO1Q9Y6N7 1651 aa28.4■■■□□ 2.14
HMGA2-206ENST00000536545 SEC24BO95487 1268 aa28.4■■■□□ 2.14
HMGA2-206ENST00000536545 C5P01031 1676 aa28.4■■■□□ 2.14
HMGA2-206ENST00000536545 DCAF5Q96JK2 942 aa28.39■■■□□ 2.14
HMGA2-206ENST00000536545 LTBP4Q8N2S1 1624 aa28.39■■■□□ 2.14
HMGA2-206ENST00000536545 DDRGK1Q96HY6 314 aa28.38■■■□□ 2.13
HMGA2-206ENST00000536545 GNAI2P04899 355 aa28.37■■■□□ 2.13
HMGA2-206ENST00000536545 GNAI3P08754 354 aa28.37■■■□□ 2.13
HMGA2-206ENST00000536545 TOM1L2Q6ZVM7 507 aa28.37■■■□□ 2.13
HMGA2-206ENST00000536545 ERICH6Q7L0X2 663 aa28.37■■■□□ 2.13
HMGA2-206ENST00000536545 DBF4Q9UBU7 674 aaPredicted RBP28.37■■■□□ 2.13
HMGA2-206ENST00000536545 HSP90AB1P08238 724 aaKnown RBP28.37■■■□□ 2.13
HMGA2-206ENST00000536545 ZNF790Q6PG37 636 aa28.37■■■□□ 2.13
HMGA2-206ENST00000536545 ZBTB47Q9UFB7 747 aaPredicted RBP28.37■■■□□ 2.13
HMGA2-206ENST00000536545 CARD10Q9BWT7 1032 aa28.36■■■□□ 2.13
HMGA2-206ENST00000536545 SHANK3Q9BYB0 1731 aa28.36■■■□□ 2.13
HMGA2-206ENST00000536545 COL22A1Q8NFW1 1626 aaPredicted RBP28.35■■■□□ 2.13
HMGA2-206ENST00000536545 ADCY9O60503 1353 aa28.35■■■□□ 2.13
HMGA2-206ENST00000536545 GLI3P10071 1580 aa28.35■■■□□ 2.13
HMGA2-206ENST00000536545 PRAMEF22A3QJZ6 481 aa28.34■■■□□ 2.13
HMGA2-206ENST00000536545 HMMRO75330 724 aa28.34■■■□□ 2.13
HMGA2-206ENST00000536545 ANP32EQ9BTT0 268 aa28.34■■■□□ 2.13
HMGA2-206ENST00000536545 NFATC2IPQ8NCF5 419 aa28.34■■■□□ 2.13
HMGA2-206ENST00000536545 PCDH11XQ9BZA7 1347 aa28.33■■■□□ 2.13
HMGA2-206ENST00000536545 PCDH11YQ9BZA8 1340 aa28.33■■■□□ 2.13
HMGA2-206ENST00000536545 ANXA1P04083 346 aa28.33■■■□□ 2.13
HMGA2-206ENST00000536545 BMP2KLQ5H9B9 411 aa28.33■■■□□ 2.13
HMGA2-206ENST00000536545 SLC39A6Q13433 755 aa28.32■■■□□ 2.12
HMGA2-206ENST00000536545 PROSER3Q2NL68 480 aa28.32■■■□□ 2.12
HMGA2-206ENST00000536545 DNAAF4Q8WXU2 420 aa28.32■■■□□ 2.12
HMGA2-206ENST00000536545 USP44Q9H0E7 712 aa28.32■■■□□ 2.12
HMGA2-206ENST00000536545 SRCIN1Q9C0H9 1055 aa28.3■■■□□ 2.12
HMGA2-206ENST00000536545 PI4KAP2A4QPH2 592 aa28.29■■■□□ 2.12
HMGA2-206ENST00000536545 BEND3Q5T5X7 828 aa28.29■■■□□ 2.12
HMGA2-206ENST00000536545 LARP1Q6PKG0 1096 aaKnown RBP28.29■■■□□ 2.12
HMGA2-206ENST00000536545 PI4KAP1Q8N8J0 262 aa28.29■■■□□ 2.12
HMGA2-206ENST00000536545 ZCRB1Q8TBF4 217 aaKnown RBP28.29■■■□□ 2.12
HMGA2-206ENST00000536545 COL14A1Q05707 1796 aaKnown RBP28.29■■■□□ 2.12
HMGA2-206ENST00000536545 IL2RBP14784 551 aa28.28■■■□□ 2.12
HMGA2-206ENST00000536545 HYPKQ9NX55 129 aa28.28■■■□□ 2.12
HMGA2-206ENST00000536545 COL16A1Q07092 1604 aaPredicted RBP28.28■■■□□ 2.12
HMGA2-206ENST00000536545 DDX21Q9NR30 783 aaKnown RBP eCLIP28.27■■■□□ 2.12
HMGA2-206ENST00000536545 LRRFIP2Q9Y608 721 aaKnown RBP28.27■■■□□ 2.12
HMGA2-206ENST00000536545 PAPPAQ13219 1627 aa28.27■■■□□ 2.12
HMGA2-206ENST00000536545 LAMB4A4D0S4 1761 aa28.27■■■□□ 2.12
HMGA2-206ENST00000536545 UBTFL1P0CB47 393 aaPredicted RBP28.27■■■□□ 2.12
HMGA2-206ENST00000536545 PDIA6Q15084 440 aa28.27■■■□□ 2.12
HMGA2-206ENST00000536545 ZNF496Q96IT1 587 aaPredicted RBP28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms