RNA–Protein interactions for RNA: ENST00000536400.5

PRKCH-202, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-202ENST00000536400 SMG6Q86US8 1419 aaKnown RBP10.54□□□□□ -0.72
PRKCH-202ENST00000536400 PIGBQ92521 554 aa10.54□□□□□ -0.72
PRKCH-202ENST00000536400 CARD11Q9BXL7 1154 aa10.54□□□□□ -0.72
PRKCH-202ENST00000536400 U3KPZ7 1027 aaPredicted RBP10.54□□□□□ -0.72
PRKCH-202ENST00000536400 LOC102724428A0A0B4J2F2 783 aa10.53□□□□□ -0.72
PRKCH-202ENST00000536400 MMP10P09238 476 aa10.53□□□□□ -0.72
PRKCH-202ENST00000536400 SIK1P57059 783 aa10.53□□□□□ -0.72
PRKCH-202ENST00000536400 HTRA3P83110 453 aa10.53□□□□□ -0.72
PRKCH-202ENST00000536400 NKX1-1Q15270 411 aaPredicted RBP10.53□□□□□ -0.72
PRKCH-202ENST00000536400 BCS1LQ9Y276 419 aa10.53□□□□□ -0.72
PRKCH-202ENST00000536400 INSRP06213 1382 aa10.52□□□□□ -0.72
PRKCH-202ENST00000536400 C10orf71Q711Q0 1435 aa10.52□□□□□ -0.73
PRKCH-202ENST00000536400 ARFGEF1Q9Y6D6 1849 aa10.52□□□□□ -0.73
PRKCH-202ENST00000536400 PRELPP51888 382 aa10.52□□□□□ -0.73
PRKCH-202ENST00000536400 FSTL1Q12841 308 aa10.52□□□□□ -0.73
PRKCH-202ENST00000536400 HSP90AB2PQ58FF8 381 aa10.52□□□□□ -0.73
PRKCH-202ENST00000536400 ARHGAP27Q6ZUM4 889 aa10.52□□□□□ -0.73
PRKCH-202ENST00000536400 A0A0G2JLW4 131 aa10.51□□□□□ -0.73
PRKCH-202ENST00000536400 FYB1O15117 783 aa10.51□□□□□ -0.73
PRKCH-202ENST00000536400 GNPATO15228 680 aa10.51□□□□□ -0.73
PRKCH-202ENST00000536400 CAPN15O75808 1086 aa10.51□□□□□ -0.73
PRKCH-202ENST00000536400 NEUROD1Q13562 356 aa10.51□□□□□ -0.73
PRKCH-202ENST00000536400 ITPK1Q13572 414 aa10.51□□□□□ -0.73
PRKCH-202ENST00000536400 SAMD1Q6SPF0 538 aaPredicted RBP10.51□□□□□ -0.73
PRKCH-202ENST00000536400 TNS4Q8IZW8 715 aa10.51□□□□□ -0.73
PRKCH-202ENST00000536400 TESK2Q96S53 571 aa10.51□□□□□ -0.73
PRKCH-202ENST00000536400 KIF24Q5T7B8 1368 aa10.51□□□□□ -0.73
PRKCH-202ENST00000536400 PLEKHG2Q9H7P9 1386 aa10.51□□□□□ -0.73
PRKCH-202ENST00000536400 NCAPD2Q15021 1401 aa10.5□□□□□ -0.73
PRKCH-202ENST00000536400 DPEP1P16444 411 aa10.5□□□□□ -0.73
PRKCH-202ENST00000536400 C9orf131Q5VYM1 1079 aa10.5□□□□□ -0.73
PRKCH-202ENST00000536400 FLT4P35916 1363 aa10.5□□□□□ -0.73
PRKCH-202ENST00000536400 FCHSD2O94868 740 aa10.49□□□□□ -0.73
PRKCH-202ENST00000536400 KCNA3P22001 575 aa10.49□□□□□ -0.73
PRKCH-202ENST00000536400 ATP6V1AP38606 617 aa10.49□□□□□ -0.73
PRKCH-202ENST00000536400 C16orf71Q8IYS4 520 aaPredicted RBP10.49□□□□□ -0.73
PRKCH-202ENST00000536400 NLGN1Q8N2Q7 840 aa10.49□□□□□ -0.73
PRKCH-202ENST00000536400 GGNBP2Q9H3C7 697 aa10.49□□□□□ -0.73
PRKCH-202ENST00000536400 ASAP1Q9ULH1 1129 aa10.49□□□□□ -0.73
PRKCH-202ENST00000536400 C4AP0C0L4 1744 aa10.49□□□□□ -0.73
PRKCH-202ENST00000536400 SBF1O95248 1867 aa10.49□□□□□ -0.73
PRKCH-202ENST00000536400 KCPQ6ZWJ8 1503 aa10.48□□□□□ -0.73
PRKCH-202ENST00000536400 TMF1P82094 1093 aa10.48□□□□□ -0.73
PRKCH-202ENST00000536400 CCDC87Q9NVE4 849 aa10.48□□□□□ -0.73
PRKCH-202ENST00000536400 KDM2BQ8NHM5 1336 aa10.48□□□□□ -0.73
PRKCH-202ENST00000536400 ZNF831Q5JPB2 1677 aa10.47□□□□□ -0.73
PRKCH-202ENST00000536400 TNRC6CQ9HCJ0 1690 aaKnown RBP10.47□□□□□ -0.73
PRKCH-202ENST00000536400 TRAPPC3LQ5T215 181 aa10.47□□□□□ -0.73
PRKCH-202ENST00000536400 DCAF5Q96JK2 942 aa10.47□□□□□ -0.73
PRKCH-202ENST00000536400 ATG3Q9NT62 314 aa10.47□□□□□ -0.73
PRKCH-202ENST00000536400 TMOD3Q9NYL9 352 aa10.47□□□□□ -0.73
PRKCH-202ENST00000536400 KDRP35968 1356 aa10.47□□□□□ -0.73
PRKCH-202ENST00000536400 KIF20BQ96Q89 1820 aa10.47□□□□□ -0.73
PRKCH-202ENST00000536400 MYH14Q7Z406 1995 aaKnown RBP10.46□□□□□ -0.73
PRKCH-202ENST00000536400 GYS1P13807 737 aa10.46□□□□□ -0.73
PRKCH-202ENST00000536400 ARHGEF1Q92888 912 aaKnown RBP10.46□□□□□ -0.73
PRKCH-202ENST00000536400 SLC4A9Q96Q91 983 aa10.46□□□□□ -0.73
PRKCH-202ENST00000536400 RRAGCQ9HB90 399 aa10.46□□□□□ -0.73
PRKCH-202ENST00000536400 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.46□□□□□ -0.73
PRKCH-202ENST00000536400 SPG7Q9UQ90 795 aa10.46□□□□□ -0.73
PRKCH-202ENST00000536400 RTCBQ9Y3I0 505 aaKnown RBP10.46□□□□□ -0.73
PRKCH-202ENST00000536400 TONSLQ96HA7 1378 aa10.46□□□□□ -0.74
PRKCH-202ENST00000536400 COL5A3P25940 1745 aaPredicted RBP10.46□□□□□ -0.74
PRKCH-202ENST00000536400 ST20-MTHFSA0A0A6YYL1 179 aa10.45□□□□□ -0.74
PRKCH-202ENST00000536400 SLC24A1O60721 1099 aa10.45□□□□□ -0.74
PRKCH-202ENST00000536400 PHKG2P15735 406 aa10.45□□□□□ -0.74
PRKCH-202ENST00000536400 RC3H1Q5TC82 1133 aaKnown RBP10.45□□□□□ -0.74
PRKCH-202ENST00000536400 SMC1BQ8NDV3 1235 aa10.45□□□□□ -0.74
PRKCH-202ENST00000536400 PIM2Q9P1W9 311 aa10.45□□□□□ -0.74
PRKCH-202ENST00000536400 PARP3Q9Y6F1 533 aa10.45□□□□□ -0.74
PRKCH-202ENST00000536400 CNTNAP4Q9C0A0 1308 aa10.44□□□□□ -0.74
PRKCH-202ENST00000536400 HSPA1AP0DMV8 641 aaKnown RBP10.44□□□□□ -0.74
PRKCH-202ENST00000536400 HSPA1BP0DMV9 641 aaKnown RBP10.44□□□□□ -0.74
PRKCH-202ENST00000536400 DALRD3Q5D0E6 543 aaKnown RBP10.44□□□□□ -0.74
PRKCH-202ENST00000536400 IFNL2Q8IZJ0 200 aa10.44□□□□□ -0.74
PRKCH-202ENST00000536400 RNF181Q9P0P0 153 aa10.44□□□□□ -0.74
PRKCH-202ENST00000536400 EMILIN1Q9Y6C2 1016 aa10.44□□□□□ -0.74
PRKCH-202ENST00000536400 ANKRD26Q9UPS8 1709 aa10.44□□□□□ -0.74
PRKCH-202ENST00000536400 RPS6KA4O75676 772 aa10.43□□□□□ -0.74
PRKCH-202ENST00000536400 RFC4P35249 363 aa10.43□□□□□ -0.74
PRKCH-202ENST00000536400 EYA1Q99502 592 aa10.43□□□□□ -0.74
PRKCH-202ENST00000536400 WASHC2AQ641Q2 1341 aa10.42□□□□□ -0.74
PRKCH-202ENST00000536400 ZC3H4Q9UPT8 1303 aaKnown RBP10.42□□□□□ -0.74
PRKCH-202ENST00000536400 KDM6AO15550 1401 aaPredicted RBP10.41□□□□□ -0.74
PRKCH-202ENST00000536400 ERVV-2B6SEH9 535 aa10.41□□□□□ -0.74
PRKCH-202ENST00000536400 RTN4Q9NQC3 1192 aaKnown RBP10.41□□□□□ -0.74
PRKCH-202ENST00000536400 CHRNA5P30532 468 aa10.4□□□□□ -0.74
PRKCH-202ENST00000536400 DDR1Q08345 913 aa10.4□□□□□ -0.74
PRKCH-202ENST00000536400 RBM42Q9BTD8 480 aaKnown RBP10.4□□□□□ -0.74
PRKCH-202ENST00000536400 CCDC88AQ3V6T2 1871 aa10.4□□□□□ -0.75
PRKCH-202ENST00000536400 USP42Q9H9J4 1324 aaKnown RBP10.39□□□□□ -0.75
PRKCH-202ENST00000536400 GLTPD2A6NH11 291 aa10.39□□□□□ -0.75
PRKCH-202ENST00000536400 VEGFAP15692 232 aaPredicted RBP10.39□□□□□ -0.75
PRKCH-202ENST00000536400 CARD14Q9BXL6 1004 aa10.39□□□□□ -0.75
PRKCH-202ENST00000536400 ADAMTS7Q9UKP4 1686 aa10.38□□□□□ -0.75
PRKCH-202ENST00000536400 POLRMTO00411 1230 aaKnown RBP10.38□□□□□ -0.75
PRKCH-202ENST00000536400 PPM1GO15355 546 aaPredicted RBP10.38□□□□□ -0.75
PRKCH-202ENST00000536400 TM4SF1P30408 202 aa10.38□□□□□ -0.75
PRKCH-202ENST00000536400 RASSF7Q02833 373 aa10.38□□□□□ -0.75
PRKCH-202ENST00000536400 SRP68Q9UHB9 627 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms