RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 C1orf229Q6ZS94 237 aaPredicted RBP7.72□□□□□ -1.17
YBX3-205ENST00000536107 CFHR5Q9BXR6 569 aa7.72□□□□□ -1.17
YBX3-205ENST00000536107 RRAGCQ9HB90 399 aa7.72□□□□□ -1.17
YBX3-205ENST00000536107 GDF2Q9UK05 429 aaPredicted RBP7.72□□□□□ -1.17
YBX3-205ENST00000536107 SYNJ1O43426 1573 aa7.71□□□□□ -1.17
YBX3-205ENST00000536107 ATP5J2-PTCD1G3V325 749 aa7.71□□□□□ -1.18
YBX3-205ENST00000536107 PIK3R2O00459 728 aa7.71□□□□□ -1.18
YBX3-205ENST00000536107 CLK2P49760 499 aaKnown RBP7.71□□□□□ -1.18
YBX3-205ENST00000536107 POU4F2Q12837 409 aa7.71□□□□□ -1.18
YBX3-205ENST00000536107 WDR44Q5JSH3 913 aa7.71□□□□□ -1.18
YBX3-205ENST00000536107 LINC00114Q6XXX2 140 aa7.71□□□□□ -1.18
YBX3-205ENST00000536107 CD163Q86VB7 1156 aa7.71□□□□□ -1.18
YBX3-205ENST00000536107 SEPT12Q8IYM1 358 aa7.71□□□□□ -1.18
YBX3-205ENST00000536107 LRRN4Q8WUT4 740 aa7.71□□□□□ -1.18
YBX3-205ENST00000536107 KLRG1Q96E93 195 aa7.71□□□□□ -1.18
YBX3-205ENST00000536107 NUCKS1Q9H1E3 243 aaKnown RBP7.71□□□□□ -1.18
YBX3-205ENST00000536107 CLASP1Q7Z460 1538 aa7.71□□□□□ -1.18
YBX3-205ENST00000536107 ADGRL1O94910 1474 aa7.7□□□□□ -1.18
YBX3-205ENST00000536107 HOXB4P17483 251 aaPredicted RBP7.7□□□□□ -1.18
YBX3-205ENST00000536107 NR6A1Q15406 480 aa7.7□□□□□ -1.18
YBX3-205ENST00000536107 EDARADDQ8WWZ3 215 aa7.7□□□□□ -1.18
YBX3-205ENST00000536107 SUV39H2Q9H5I1 410 aa7.7□□□□□ -1.18
YBX3-205ENST00000536107 CYLDQ9NQC7 956 aa7.7□□□□□ -1.18
YBX3-205ENST00000536107 MEN1O00255 615 aa7.69□□□□□ -1.18
YBX3-205ENST00000536107 ZMYM1Q5SVZ6 1142 aa7.69□□□□□ -1.18
YBX3-205ENST00000536107 DZIP3Q86Y13 1208 aaKnown RBP7.69□□□□□ -1.18
YBX3-205ENST00000536107 ZC3H15Q8WU90 426 aaKnown RBP7.69□□□□□ -1.18
YBX3-205ENST00000536107 TDRD9Q8NDG6 1382 aaKnown RBP7.69□□□□□ -1.18
YBX3-205ENST00000536107 TOPBP1Q92547 1522 aa7.68□□□□□ -1.18
YBX3-205ENST00000536107 SPATA31C2B4DYI2 1134 aa7.68□□□□□ -1.18
YBX3-205ENST00000536107 F11P03951 625 aa7.68□□□□□ -1.18
YBX3-205ENST00000536107 NBPF10Q6P3W6 841 aaKnown RBP7.68□□□□□ -1.18
YBX3-205ENST00000536107 NBPF15Q8N660 670 aa7.68□□□□□ -1.18
YBX3-205ENST00000536107 GOLGA6L1Q8N7Z2 621 aa7.68□□□□□ -1.18
YBX3-205ENST00000536107 GRIP2Q9C0E4 1043 aa7.68□□□□□ -1.18
YBX3-205ENST00000536107 SEMA6BQ9H3T3 888 aa7.68□□□□□ -1.18
YBX3-205ENST00000536107 SNAPC4Q5SXM2 1469 aa7.68□□□□□ -1.18
YBX3-205ENST00000536107 KDM6BO15054 1643 aa7.67□□□□□ -1.18
YBX3-205ENST00000536107 A0A1W2PRU2 124 aa7.67□□□□□ -1.18
YBX3-205ENST00000536107 GNB5O14775 395 aa7.67□□□□□ -1.18
YBX3-205ENST00000536107 CHRNA4P43681 627 aa7.67□□□□□ -1.18
YBX3-205ENST00000536107 HAP1P54257 671 aaPredicted RBP7.67□□□□□ -1.18
YBX3-205ENST00000536107 SLC27A3Q5K4L6 730 aa7.67□□□□□ -1.18
YBX3-205ENST00000536107 PHF24Q9UPV7 400 aa7.67□□□□□ -1.18
YBX3-205ENST00000536107 NLRP3Q96P20 1036 aa7.65□□□□□ -1.18
YBX3-205ENST00000536107 RSPH6AQ9H0K4 717 aa7.65□□□□□ -1.18
YBX3-205ENST00000536107 TIMMDC1Q9NPL8 285 aa7.65□□□□□ -1.18
YBX3-205ENST00000536107 NOP53Q9NZM5 478 aaKnown RBP7.65□□□□□ -1.18
YBX3-205ENST00000536107 ABCC8Q09428 1581 aa7.64□□□□□ -1.19
YBX3-205ENST00000536107 THBS1P07996 1170 aa7.64□□□□□ -1.19
YBX3-205ENST00000536107 SLCO4C1Q6ZQN7 724 aa7.64□□□□□ -1.19
YBX3-205ENST00000536107 TAS1R3Q7RTX0 852 aa7.64□□□□□ -1.19
YBX3-205ENST00000536107 PNMA1Q8ND90 353 aa7.64□□□□□ -1.19
YBX3-205ENST00000536107 AK7Q96M32 723 aa7.64□□□□□ -1.19
YBX3-205ENST00000536107 AMPD1P23109 780 aa7.63□□□□□ -1.19
YBX3-205ENST00000536107 CLN3Q13286 438 aa7.63□□□□□ -1.19
YBX3-205ENST00000536107 DOC2BQ14184 412 aa7.63□□□□□ -1.19
YBX3-205ENST00000536107 POLR3EQ9NVU0 708 aa7.63□□□□□ -1.19
YBX3-205ENST00000536107 ABCC10Q5T3U5 1492 aa7.62□□□□□ -1.19
YBX3-205ENST00000536107 WASLO00401 505 aaPredicted RBP7.62□□□□□ -1.19
YBX3-205ENST00000536107 CCDC125Q86Z20 511 aa7.62□□□□□ -1.19
YBX3-205ENST00000536107 DGKGP49619 791 aa7.61□□□□□ -1.19
YBX3-205ENST00000536107 ERVK-9P63128 1117 aa7.61□□□□□ -1.19
YBX3-205ENST00000536107 LBRQ14739 615 aaKnown RBP7.61□□□□□ -1.19
YBX3-205ENST00000536107 BTBD6Q96KE9 485 aa7.61□□□□□ -1.19
YBX3-205ENST00000536107 RAD54L2Q9Y4B4 1467 aa7.61□□□□□ -1.19
YBX3-205ENST00000536107 SOGA1O94964 1423 aa7.61□□□□□ -1.19
YBX3-205ENST00000536107 KIF13AQ9H1H9 1805 aa7.6□□□□□ -1.19
YBX3-205ENST00000536107 BTBD11A6QL63 1104 aa7.6□□□□□ -1.19
YBX3-205ENST00000536107 UBAP2LQ14157 1087 aaKnown RBP7.6□□□□□ -1.19
YBX3-205ENST00000536107 CC2D2BQ6DHV5 1058 aa7.6□□□□□ -1.19
YBX3-205ENST00000536107 KRTAP9-9Q9BYP9 154 aa7.6□□□□□ -1.19
YBX3-205ENST00000536107 KRTAP9-4Q9BYQ2 154 aa7.6□□□□□ -1.19
YBX3-205ENST00000536107 GGA1Q9UJY5 639 aa7.6□□□□□ -1.19
YBX3-205ENST00000536107 MAGI1Q96QZ7 1491 aaPredicted RBP7.6□□□□□ -1.19
YBX3-205ENST00000536107 TARBP1Q13395 1621 aaKnown RBP7.6□□□□□ -1.19
YBX3-205ENST00000536107 SCO2A0A1W2PP80 73 aa7.59□□□□□ -1.19
YBX3-205ENST00000536107 EPXP11678 715 aa7.59□□□□□ -1.19
YBX3-205ENST00000536107 PDE4DQ08499 809 aa7.59□□□□□ -1.19
YBX3-205ENST00000536107 ATXN7L1Q9ULK2 861 aaPredicted RBP7.59□□□□□ -1.19
YBX3-205ENST00000536107 WIZO95785 1651 aa7.59□□□□□ -1.19
YBX3-205ENST00000536107 C2CD2LO14523 706 aa7.58□□□□□ -1.2
YBX3-205ENST00000536107 BMP4P12644 408 aa7.58□□□□□ -1.2
YBX3-205ENST00000536107 GATA4P43694 442 aa7.58□□□□□ -1.2
YBX3-205ENST00000536107 CYP2U1Q7Z449 544 aa7.58□□□□□ -1.2
YBX3-205ENST00000536107 EPS8L1Q8TE68 723 aa7.58□□□□□ -1.2
YBX3-205ENST00000536107 DNMBPQ6XZF7 1577 aa7.58□□□□□ -1.2
YBX3-205ENST00000536107 POLA1P09884 1462 aaPredicted RBP7.57□□□□□ -1.2
YBX3-205ENST00000536107 GRIN2BQ13224 1484 aa7.57□□□□□ -1.2
YBX3-205ENST00000536107 A0A1B0GTH6 734 aa7.57□□□□□ -1.2
YBX3-205ENST00000536107 GIGYF1O75420 1035 aaPredicted RBP7.57□□□□□ -1.2
YBX3-205ENST00000536107 FOXD4L6Q3SYB3 417 aaPredicted RBP7.57□□□□□ -1.2
YBX3-205ENST00000536107 FOXD4L3Q6VB84 417 aaPredicted RBP7.57□□□□□ -1.2
YBX3-205ENST00000536107 GPAMQ9HCL2 828 aa7.57□□□□□ -1.2
YBX3-205ENST00000536107 RSPO4Q2I0M5 234 aaPredicted RBP7.56□□□□□ -1.2
YBX3-205ENST00000536107 ARTNQ5T4W7 220 aa7.56□□□□□ -1.2
YBX3-205ENST00000536107 VSIG10Q8N0Z9 540 aa7.56□□□□□ -1.2
YBX3-205ENST00000536107 ZFP64Q9NPA5 681 aa7.56□□□□□ -1.2
YBX3-205ENST00000536107 FBXO31Q5XUX0 539 aaPredicted RBP7.55□□□□□ -1.2
YBX3-205ENST00000536107 RNF135Q8IUD6 432 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms