RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 TAF1LQ8IZX4 1826 aa16.6■□□□□ 0.25
CCND1-202ENST00000535993 CHD4Q14839 1912 aa16.59■□□□□ 0.25
CCND1-202ENST00000535993 GNPATO15228 680 aa16.59■□□□□ 0.25
CCND1-202ENST00000535993 ITPK1Q13572 414 aa16.59■□□□□ 0.25
CCND1-202ENST00000535993 C1orf141Q5JVX7 400 aa16.59■□□□□ 0.25
CCND1-202ENST00000535993 AMIGO3Q86WK7 504 aa16.59■□□□□ 0.25
CCND1-202ENST00000535993 CABP4P57796 275 aa16.58■□□□□ 0.24
CCND1-202ENST00000535993 AMER1Q5JTC6 1135 aaPredicted RBP16.58■□□□□ 0.24
CCND1-202ENST00000535993 SULT6B1Q6IMI4 303 aa16.58■□□□□ 0.24
CCND1-202ENST00000535993 KIF7Q2M1P5 1343 aa16.58■□□□□ 0.24
CCND1-202ENST00000535993 IL13P35225 146 aa16.57■□□□□ 0.24
CCND1-202ENST00000535993 MTHFSP49914 203 aa16.57■□□□□ 0.24
CCND1-202ENST00000535993 AEBP1Q8IUX7 1158 aa16.57■□□□□ 0.24
CCND1-202ENST00000535993 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
CCND1-202ENST00000535993 SMIM5Q71RC9 77 aa16.56■□□□□ 0.24
CCND1-202ENST00000535993 YBX3P16989 372 aaKnown RBP eCLIP16.55■□□□□ 0.249e-6■■■□□ 18.6
CCND1-202ENST00000535993 TRAPPC3LQ5T215 181 aa16.55■□□□□ 0.24
CCND1-202ENST00000535993 RTCBQ9Y3I0 505 aaKnown RBP16.55■□□□□ 0.24
CCND1-202ENST00000535993 UBR3Q6ZT12 1888 aa16.54■□□□□ 0.24
CCND1-202ENST00000535993 KDRP35968 1356 aa16.54■□□□□ 0.24
CCND1-202ENST00000535993 RC3H1Q5TC82 1133 aaKnown RBP16.54■□□□□ 0.24
CCND1-202ENST00000535993 KDM6AO15550 1401 aaPredicted RBP16.53■□□□□ 0.24
CCND1-202ENST00000535993 GOLGB1Q14789 3259 aaKnown RBP16.53■□□□□ 0.24
CCND1-202ENST00000535993 ADRA2BP18089 450 aa16.53■□□□□ 0.24
CCND1-202ENST00000535993 NFATC2IPQ8NCF5 419 aa16.52■□□□□ 0.24
CCND1-202ENST00000535993 SLC4A9Q96Q91 983 aa16.52■□□□□ 0.24
CCND1-202ENST00000535993 CNTNAP4Q9C0A0 1308 aa16.51■□□□□ 0.23
CCND1-202ENST00000535993 PER1O15534 1290 aaPredicted RBP16.51■□□□□ 0.23
CCND1-202ENST00000535993 AKAP4Q5JQC9 854 aa16.51■□□□□ 0.23
CCND1-202ENST00000535993 NLGN1Q8N2Q7 840 aa16.51■□□□□ 0.23
CCND1-202ENST00000535993 PTCD1O75127 700 aaKnown RBP16.5■□□□□ 0.23
CCND1-202ENST00000535993 MMP10P09238 476 aa16.5■□□□□ 0.23
CCND1-202ENST00000535993 CC2D1BQ5T0F9 858 aaKnown RBP16.5■□□□□ 0.23
CCND1-202ENST00000535993 RPS6KA4O75676 772 aa16.49■□□□□ 0.23
CCND1-202ENST00000535993 RFC4P35249 363 aa16.49■□□□□ 0.23
CCND1-202ENST00000535993 ARHGEF1Q92888 912 aaKnown RBP16.49■□□□□ 0.23
CCND1-202ENST00000535993 DIAPH1O60610 1272 aaKnown RBP16.48■□□□□ 0.23
CCND1-202ENST00000535993 ZNF831Q5JPB2 1677 aa16.47■□□□□ 0.23
CCND1-202ENST00000535993 GIGYF1O75420 1035 aaPredicted RBP16.47■□□□□ 0.23
CCND1-202ENST00000535993 HMOX1P09601 288 aa16.47■□□□□ 0.23
CCND1-202ENST00000535993 C1QTNF8P60827 252 aa16.47■□□□□ 0.23
CCND1-202ENST00000535993 SLC52A2Q9HAB3 445 aa16.46■□□□□ 0.23
CCND1-202ENST00000535993 GYS1P13807 737 aa16.45■□□□□ 0.22
CCND1-202ENST00000535993 CRKLP46109 303 aaKnown RBP16.45■□□□□ 0.22
CCND1-202ENST00000535993 NPC1L1Q9UHC9 1359 aa16.45■□□□□ 0.22
CCND1-202ENST00000535993 RNMTO43148 476 aaKnown RBP16.44■□□□□ 0.22
CCND1-202ENST00000535993 TGFB2P61812 414 aa16.44■□□□□ 0.22
CCND1-202ENST00000535993 LGR6Q9HBX8 967 aa16.44■□□□□ 0.22
CCND1-202ENST00000535993 CCDC87Q9NVE4 849 aa16.44■□□□□ 0.22
CCND1-202ENST00000535993 WWC3Q9ULE0 1092 aa16.44■□□□□ 0.22
CCND1-202ENST00000535993 PARP3Q9Y6F1 533 aa16.44■□□□□ 0.22
CCND1-202ENST00000535993 MTHFSDQ2M296 383 aaKnown RBP16.43■□□□□ 0.22
CCND1-202ENST00000535993 COL5A3P25940 1745 aaPredicted RBP16.42■□□□□ 0.22
CCND1-202ENST00000535993 SENP3-EIF4A1A0A087X0R7 540 aa16.41■□□□□ 0.22
CCND1-202ENST00000535993 CNGB1Q14028 1251 aaPredicted RBP16.41■□□□□ 0.22
CCND1-202ENST00000535993 ATP10DQ9P241 1426 aa16.41■□□□□ 0.22
CCND1-202ENST00000535993 U2SURPO15042 1029 aaKnown RBP16.4■□□□□ 0.22
CCND1-202ENST00000535993 INTS5Q6P9B9 1019 aaKnown RBP16.4■□□□□ 0.22
CCND1-202ENST00000535993 DNAJC10Q8IXB1 793 aa16.4■□□□□ 0.22
CCND1-202ENST00000535993 GPBP1L1Q9HC44 474 aaPredicted RBP16.4■□□□□ 0.22
CCND1-202ENST00000535993 CICQ96RK0 1608 aaPredicted RBP16.4■□□□□ 0.22
CCND1-202ENST00000535993 MYH14Q7Z406 1995 aaKnown RBP16.4■□□□□ 0.22
CCND1-202ENST00000535993 USP42Q9H9J4 1324 aaKnown RBP16.4■□□□□ 0.22
CCND1-202ENST00000535993 SCN11AQ9UI33 1791 aa16.39■□□□□ 0.21
CCND1-202ENST00000535993 C10orf71Q711Q0 1435 aa16.39■□□□□ 0.21
CCND1-202ENST00000535993 A0A0G2JLW4 131 aa16.39■□□□□ 0.21
CCND1-202ENST00000535993 ZPR1O75312 459 aa16.39■□□□□ 0.21
CCND1-202ENST00000535993 SLC39A6Q13433 755 aa16.39■□□□□ 0.21
CCND1-202ENST00000535993 SRP68Q9UHB9 627 aaKnown RBP16.39■□□□□ 0.21
CCND1-202ENST00000535993 PXDNLA1KZ92 1463 aa16.39■□□□□ 0.21
CCND1-202ENST00000535993 MRC1P22897 1456 aa16.38■□□□□ 0.21
CCND1-202ENST00000535993 FKBP8Q14318 412 aa16.38■□□□□ 0.21
CCND1-202ENST00000535993 VSIG10Q8N0Z9 540 aa16.38■□□□□ 0.21
CCND1-202ENST00000535993 GAS2L2Q8NHY3 880 aa16.38■□□□□ 0.21
CCND1-202ENST00000535993 BCS1LQ9Y276 419 aa16.38■□□□□ 0.21
CCND1-202ENST00000535993 ADCY9O60503 1353 aa16.38■□□□□ 0.21
CCND1-202ENST00000535993 CYP19A1P11511 503 aaPredicted RBP16.37■□□□□ 0.21
CCND1-202ENST00000535993 DPEP1P16444 411 aa16.37■□□□□ 0.21
CCND1-202ENST00000535993 TTC5Q8N0Z6 440 aa16.37■□□□□ 0.21
CCND1-202ENST00000535993 CFAP53Q96M91 514 aa16.37■□□□□ 0.21
CCND1-202ENST00000535993 GNAT3A8MTJ3 354 aa16.36■□□□□ 0.21
CCND1-202ENST00000535993 SOS1Q07889 1333 aaPredicted RBP16.36■□□□□ 0.21
CCND1-202ENST00000535993 ADAMTS7Q9UKP4 1686 aa16.36■□□□□ 0.21
CCND1-202ENST00000535993 C4AP0C0L4 1744 aa16.36■□□□□ 0.21
CCND1-202ENST00000535993 COL3A1P02461 1466 aaPredicted RBP16.35■□□□□ 0.21
CCND1-202ENST00000535993 FCHSD2O94868 740 aa16.35■□□□□ 0.21
CCND1-202ENST00000535993 TEFQ10587 303 aa16.35■□□□□ 0.21
CCND1-202ENST00000535993 USPL1Q5W0Q7 1092 aa16.35■□□□□ 0.21
CCND1-202ENST00000535993 TJP1Q07157 1748 aa16.35■□□□□ 0.21
CCND1-202ENST00000535993 KIF13BQ9NQT8 1826 aa16.35■□□□□ 0.21
CCND1-202ENST00000535993 VIRMAQ69YN4 1812 aaKnown RBP16.34■□□□□ 0.21
CCND1-202ENST00000535993 STARD3NLO95772 234 aa16.34■□□□□ 0.21
CCND1-202ENST00000535993 DDR1Q08345 913 aa16.34■□□□□ 0.21
CCND1-202ENST00000535993 ARHGAP27Q6ZUM4 889 aa16.34■□□□□ 0.21
CCND1-202ENST00000535993 ZNF526Q8TF50 670 aaPredicted RBP16.34■□□□□ 0.21
CCND1-202ENST00000535993 PIM2Q9P1W9 311 aa16.34■□□□□ 0.21
CCND1-202ENST00000535993 NARFQ9UHQ1 456 aa16.34■□□□□ 0.21
CCND1-202ENST00000535993 NUDCQ9Y266 331 aa16.34■□□□□ 0.21
CCND1-202ENST00000535993 TM4SF1P30408 202 aa16.33■□□□□ 0.2
CCND1-202ENST00000535993 ZBTB1Q9Y2K1 713 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms