RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 NOB1Q9ULX3 412 aaKnown RBP10.27□□□□□ -0.77
COL21A1-212ENST00000535941 NEFMP07197 916 aa10.26□□□□□ -0.77
COL21A1-212ENST00000535941 MS4A1P11836 297 aa10.26□□□□□ -0.77
COL21A1-212ENST00000535941 TWISTNBQ3B726 338 aaPredicted RBP10.26□□□□□ -0.77
COL21A1-212ENST00000535941 C14orf37Q86TY3 774 aa10.26□□□□□ -0.77
COL21A1-212ENST00000535941 HDAC1Q13547 482 aaPredicted RBP10.26□□□□□ -0.77
COL21A1-212ENST00000535941 SLIT2O94813 1529 aa10.26□□□□□ -0.77
COL21A1-212ENST00000535941 PTPRCP08575 1304 aa10.26□□□□□ -0.77
COL21A1-212ENST00000535941 WDR17Q8IZU2 1322 aa10.26□□□□□ -0.77
COL21A1-212ENST00000535941 DZIP1LQ8IYY4 767 aaKnown RBP10.26□□□□□ -0.77
COL21A1-212ENST00000535941 LRRC59Q96AG4 307 aaKnown RBP10.26□□□□□ -0.77
COL21A1-212ENST00000535941 IGHDP01880 384 aa10.25□□□□□ -0.77
COL21A1-212ENST00000535941 INTS3Q68E01 1043 aaKnown RBP10.25□□□□□ -0.77
COL21A1-212ENST00000535941 BCORQ6W2J9 1755 aa10.25□□□□□ -0.77
COL21A1-212ENST00000535941 RTL5Q5HYW3 569 aaPredicted RBP10.25□□□□□ -0.77
COL21A1-212ENST00000535941 PCDHB15Q9Y5E8 787 aa10.25□□□□□ -0.77
COL21A1-212ENST00000535941 SBF2Q86WG5 1849 aa10.25□□□□□ -0.77
COL21A1-212ENST00000535941 LAMB2P55268 1798 aa10.24□□□□□ -0.77
COL21A1-212ENST00000535941 ZBTB7BO15156 539 aaPredicted RBP10.24□□□□□ -0.77
COL21A1-212ENST00000535941 NKX1-1Q15270 411 aaPredicted RBP10.24□□□□□ -0.77
COL21A1-212ENST00000535941 SMC4Q9NTJ3 1288 aa10.24□□□□□ -0.77
COL21A1-212ENST00000535941 RNMTO43148 476 aaKnown RBP10.23□□□□□ -0.77
COL21A1-212ENST00000535941 AEBP2Q6ZN18 517 aaPredicted RBP10.23□□□□□ -0.77
COL21A1-212ENST00000535941 USHBP1Q8N6Y0 703 aa10.23□□□□□ -0.77
COL21A1-212ENST00000535941 TAF7Q15545 349 aaPredicted RBP10.23□□□□□ -0.77
COL21A1-212ENST00000535941 TMEM57Q8N5G2 664 aa10.23□□□□□ -0.77
COL21A1-212ENST00000535941 COG6Q9Y2V7 657 aa10.23□□□□□ -0.77
COL21A1-212ENST00000535941 NHSQ6T4R5 1651 aa10.22□□□□□ -0.77
COL21A1-212ENST00000535941 TCERG1O14776 1098 aaKnown RBP10.22□□□□□ -0.77
COL21A1-212ENST00000535941 EIF4A1P60842 406 aaKnown RBP10.22□□□□□ -0.77
COL21A1-212ENST00000535941 DDX19BQ9UMR2 479 aa10.22□□□□□ -0.77
COL21A1-212ENST00000535941 LY75O60449 1722 aa10.22□□□□□ -0.77
COL21A1-212ENST00000535941 SOX12O15370 315 aa10.22□□□□□ -0.77
COL21A1-212ENST00000535941 HAP1P54257 671 aaPredicted RBP10.22□□□□□ -0.77
COL21A1-212ENST00000535941 IPO8O15397 1037 aaKnown RBP10.22□□□□□ -0.77
COL21A1-212ENST00000535941 KRT24Q2M2I5 525 aa10.22□□□□□ -0.77
COL21A1-212ENST00000535941 PLEKHO1Q53GL0 409 aaPredicted RBP10.22□□□□□ -0.77
COL21A1-212ENST00000535941 PHKG2P15735 406 aa10.21□□□□□ -0.77
COL21A1-212ENST00000535941 BCL2L13Q9BXK5 485 aa10.21□□□□□ -0.77
COL21A1-212ENST00000535941 SMC5Q8IY18 1101 aa10.21□□□□□ -0.78
COL21A1-212ENST00000535941 IL27Q8NEV9 243 aa10.21□□□□□ -0.78
COL21A1-212ENST00000535941 LGR6Q9HBX8 967 aa10.21□□□□□ -0.78
COL21A1-212ENST00000535941 LRP10Q7Z4F1 713 aa10.2□□□□□ -0.78
COL21A1-212ENST00000535941 CARD10Q9BWT7 1032 aa10.2□□□□□ -0.78
COL21A1-212ENST00000535941 A0A0U1RQG5 324 aaPredicted RBP10.2□□□□□ -0.78
COL21A1-212ENST00000535941 TAF1LQ8IZX4 1826 aa10.2□□□□□ -0.78
COL21A1-212ENST00000535941 API5Q9BZZ5 524 aaKnown RBP10.19□□□□□ -0.78
COL21A1-212ENST00000535941 A0A1B0GUL6 1792 aa10.19□□□□□ -0.78
COL21A1-212ENST00000535941 CYP27B1O15528 508 aa10.18□□□□□ -0.78
COL21A1-212ENST00000535941 SIRT2Q8IXJ6 389 aa10.18□□□□□ -0.78
COL21A1-212ENST00000535941 CABLES1Q8TDN4 633 aa10.18□□□□□ -0.78
COL21A1-212ENST00000535941 TSPYL4Q9UJ04 414 aa10.18□□□□□ -0.78
COL21A1-212ENST00000535941 RTF1Q92541 710 aaKnown RBP10.18□□□□□ -0.78
COL21A1-212ENST00000535941 COL15A1P39059 1388 aa10.18□□□□□ -0.78
COL21A1-212ENST00000535941 AK9Q5TCS8 1911 aa10.18□□□□□ -0.78
COL21A1-212ENST00000535941 ZC3H6P61129 1189 aaKnown RBP10.17□□□□□ -0.78
COL21A1-212ENST00000535941 ADCY9O60503 1353 aa10.17□□□□□ -0.78
COL21A1-212ENST00000535941 MYH3P11055 1940 aa10.17□□□□□ -0.78
COL21A1-212ENST00000535941 ZNF530Q6P9A1 599 aaPredicted RBP10.17□□□□□ -0.78
COL21A1-212ENST00000535941 FRAT1Q92837 279 aaPredicted RBP10.17□□□□□ -0.78
COL21A1-212ENST00000535941 BACH2Q9BYV9 841 aa10.17□□□□□ -0.78
COL21A1-212ENST00000535941 SLC52A2Q9HAB3 445 aa10.17□□□□□ -0.78
COL21A1-212ENST00000535941 NOP58Q9Y2X3 529 aaKnown RBP10.17□□□□□ -0.78
COL21A1-212ENST00000535941 NUP98P52948 1817 aa10.17□□□□□ -0.78
COL21A1-212ENST00000535941 C8orf34Q49A92 452 aa10.17□□□□□ -0.78
COL21A1-212ENST00000535941 LTV1Q96GA3 475 aaPredicted RBP10.17□□□□□ -0.78
COL21A1-212ENST00000535941 SCN7AQ01118 1682 aa10.16□□□□□ -0.78
COL21A1-212ENST00000535941 PDIA6Q15084 440 aa10.16□□□□□ -0.78
COL21A1-212ENST00000535941 PCDH11XQ9BZA7 1347 aa10.16□□□□□ -0.78
COL21A1-212ENST00000535941 PCDH11YQ9BZA8 1340 aa10.16□□□□□ -0.78
COL21A1-212ENST00000535941 MIS18AQ9NYP9 233 aa10.15□□□□□ -0.78
COL21A1-212ENST00000535941 ARAP2Q8WZ64 1704 aa10.15□□□□□ -0.78
COL21A1-212ENST00000535941 GIGYF1O75420 1035 aaPredicted RBP10.15□□□□□ -0.78
COL21A1-212ENST00000535941 G2E3Q7L622 706 aa10.15□□□□□ -0.78
COL21A1-212ENST00000535941 DCAF5Q96JK2 942 aa10.15□□□□□ -0.78
COL21A1-212ENST00000535941 COL24A1Q17RW2 1714 aa10.15□□□□□ -0.78
COL21A1-212ENST00000535941 UTYO14607 1347 aa10.15□□□□□ -0.78
COL21A1-212ENST00000535941 BCL9O00512 1426 aa10.15□□□□□ -0.79
COL21A1-212ENST00000535941 LAS1LQ9Y4W2 734 aaKnown RBP10.15□□□□□ -0.79
COL21A1-212ENST00000535941 LRP5O75197 1615 aa10.15□□□□□ -0.79
COL21A1-212ENST00000535941 DDX60Q8IY21 1712 aaKnown RBP10.14□□□□□ -0.79
COL21A1-212ENST00000535941 KCNQ3O43525 872 aa10.14□□□□□ -0.79
COL21A1-212ENST00000535941 SPG7Q9UQ90 795 aa10.14□□□□□ -0.79
COL21A1-212ENST00000535941 BTAF1O14981 1849 aa10.14□□□□□ -0.79
COL21A1-212ENST00000535941 NUCB1Q02818 461 aa10.14□□□□□ -0.79
COL21A1-212ENST00000535941 CCDC30Q5VVM6 783 aa10.14□□□□□ -0.79
COL21A1-212ENST00000535941 IFNL2Q8IZJ0 200 aa10.14□□□□□ -0.79
COL21A1-212ENST00000535941 CHMP4BQ9H444 224 aaKnown RBP10.14□□□□□ -0.79
COL21A1-212ENST00000535941 BCL9LQ86UU0 1499 aa10.14□□□□□ -0.79
COL21A1-212ENST00000535941 TATP17735 454 aaPredicted RBP10.14□□□□□ -0.79
COL21A1-212ENST00000535941 CHRNA2Q15822 529 aa10.14□□□□□ -0.79
COL21A1-212ENST00000535941 FTSJ3Q8IY81 847 aaKnown RBP10.14□□□□□ -0.79
COL21A1-212ENST00000535941 PDE4AP27815 886 aa10.13□□□□□ -0.79
COL21A1-212ENST00000535941 ERVV-2B6SEH9 535 aa10.12□□□□□ -0.79
COL21A1-212ENST00000535941 MPRIPQ6WCQ1 1025 aa10.12□□□□□ -0.79
COL21A1-212ENST00000535941 RWDD1Q9H446 243 aaPredicted RBP10.12□□□□□ -0.79
COL21A1-212ENST00000535941 BTBD11A6QL63 1104 aa10.12□□□□□ -0.79
COL21A1-212ENST00000535941 HSP90AB1P08238 724 aaKnown RBP10.12□□□□□ -0.79
COL21A1-212ENST00000535941 CANXP27824 592 aaKnown RBP10.12□□□□□ -0.79
COL21A1-212ENST00000535941 FLIIQ13045 1269 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms