RNA–Protein interactions for RNA: ENST00000535143.1

MSRB3-204, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 419 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-204ENST00000535143 MMP10P09238 476 aa23.73■■□□□ 1.39
MSRB3-204ENST00000535143 PHKG2P15735 406 aa23.73■■□□□ 1.39
MSRB3-204ENST00000535143 ATG3Q9NT62 314 aa23.72■■□□□ 1.39
MSRB3-204ENST00000535143 WASHC2AQ641Q2 1341 aa23.72■■□□□ 1.39
MSRB3-204ENST00000535143 IFNL2Q8IZJ0 200 aa23.71■■□□□ 1.39
MSRB3-204ENST00000535143 KDRP35968 1356 aa23.69■■□□□ 1.38
MSRB3-204ENST00000535143 TNNT2P45379 298 aaPredicted RBP23.68■■□□□ 1.38
MSRB3-204ENST00000535143 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.68■■□□□ 1.38
MSRB3-204ENST00000535143 POLKQ9UBT6 870 aa23.68■■□□□ 1.38
MSRB3-204ENST00000535143 BCS1LQ9Y276 419 aa23.68■■□□□ 1.38
MSRB3-204ENST00000535143 COL5A3P25940 1745 aaPredicted RBP23.67■■□□□ 1.38
MSRB3-204ENST00000535143 SLC4A9Q96Q91 983 aa23.67■■□□□ 1.38
MSRB3-204ENST00000535143 C10orf71Q711Q0 1435 aa23.67■■□□□ 1.38
MSRB3-204ENST00000535143 A0A0G2JLW4 131 aa23.66■■□□□ 1.38
MSRB3-204ENST00000535143 EIF4A2Q14240 407 aaKnown RBP23.66■■□□□ 1.38
MSRB3-204ENST00000535143 RBM42Q9BTD8 480 aaKnown RBP23.66■■□□□ 1.38
MSRB3-204ENST00000535143 C4AP0C0L4 1744 aa23.65■■□□□ 1.38
MSRB3-204ENST00000535143 POLR3GLQ9BT43 218 aa23.65■■□□□ 1.38
MSRB3-204ENST00000535143 RTCBQ9Y3I0 505 aaKnown RBP23.65■■□□□ 1.38
MSRB3-204ENST00000535143 BRCA1P38398 1863 aaKnown RBP23.64■■□□□ 1.38
MSRB3-204ENST00000535143 MYH14Q7Z406 1995 aaKnown RBP23.64■■□□□ 1.38
MSRB3-204ENST00000535143 TRAPPC3LQ5T215 181 aa23.64■■□□□ 1.37
MSRB3-204ENST00000535143 DPEP1P16444 411 aa23.62■■□□□ 1.37
MSRB3-204ENST00000535143 ARHGEF1Q92888 912 aaKnown RBP23.62■■□□□ 1.37
MSRB3-204ENST00000535143 KDM6AO15550 1401 aaPredicted RBP23.61■■□□□ 1.37
MSRB3-204ENST00000535143 ARHGAP27Q6ZUM4 889 aa23.61■■□□□ 1.37
MSRB3-204ENST00000535143 ZNF831Q5JPB2 1677 aa23.6■■□□□ 1.37
MSRB3-204ENST00000535143 GYS1P13807 737 aa23.6■■□□□ 1.37
MSRB3-204ENST00000535143 TGFB2P61812 414 aa23.6■■□□□ 1.37
MSRB3-204ENST00000535143 NMRK2Q9NPI5 230 aa23.6■■□□□ 1.37
MSRB3-204ENST00000535143 FCHSD2O94868 740 aa23.59■■□□□ 1.37
MSRB3-204ENST00000535143 NLGN1Q8N2Q7 840 aa23.59■■□□□ 1.37
MSRB3-204ENST00000535143 CCDC87Q9NVE4 849 aa23.59■■□□□ 1.37
MSRB3-204ENST00000535143 CNTNAP4Q9C0A0 1308 aa23.58■■□□□ 1.36
MSRB3-204ENST00000535143 ERVV-2B6SEH9 535 aa23.57■■□□□ 1.36
MSRB3-204ENST00000535143 RFC4P35249 363 aa23.57■■□□□ 1.36
MSRB3-204ENST00000535143 ARFGEF1Q9Y6D6 1849 aa23.56■■□□□ 1.36
MSRB3-204ENST00000535143 TOMM70O94826 608 aa23.56■■□□□ 1.36
MSRB3-204ENST00000535143 APLP1P51693 650 aa23.56■■□□□ 1.36
MSRB3-204ENST00000535143 ZNF530Q6P9A1 599 aaPredicted RBP23.56■■□□□ 1.36
MSRB3-204ENST00000535143 PARP3Q9Y6F1 533 aa23.56■■□□□ 1.36
MSRB3-204ENST00000535143 RPS6KA4O75676 772 aa23.55■■□□□ 1.36
MSRB3-204ENST00000535143 ADRA2BP18089 450 aa23.55■■□□□ 1.36
MSRB3-204ENST00000535143 CABP4P57796 275 aa23.55■■□□□ 1.36
MSRB3-204ENST00000535143 RC3H1Q5TC82 1133 aaKnown RBP23.55■■□□□ 1.36
MSRB3-204ENST00000535143 DCAF5Q96JK2 942 aa23.55■■□□□ 1.36
MSRB3-204ENST00000535143 SRP68Q9UHB9 627 aaKnown RBP23.55■■□□□ 1.36
MSRB3-204ENST00000535143 WDR90Q96KV7 1748 aa23.54■■□□□ 1.36
MSRB3-204ENST00000535143 TJP1Q07157 1748 aa23.53■■□□□ 1.36
MSRB3-204ENST00000535143 PTCD1O75127 700 aaKnown RBP23.53■■□□□ 1.36
MSRB3-204ENST00000535143 HSP90AB1P08238 724 aaKnown RBP23.53■■□□□ 1.36
MSRB3-204ENST00000535143 PLEKHO1Q53GL0 409 aaPredicted RBP23.53■■□□□ 1.36
MSRB3-204ENST00000535143 C9orf131Q5VYM1 1079 aa23.53■■□□□ 1.36
MSRB3-204ENST00000535143 AEBP1Q8IUX7 1158 aa23.53■■□□□ 1.36
MSRB3-204ENST00000535143 PLEKHG2Q9H7P9 1386 aa23.52■■□□□ 1.36
MSRB3-204ENST00000535143 KCNA3P22001 575 aa23.52■■□□□ 1.36
MSRB3-204ENST00000535143 HTRA3P83110 453 aa23.51■■□□□ 1.35
MSRB3-204ENST00000535143 KCPQ6ZWJ8 1503 aa23.5■■□□□ 1.35
MSRB3-204ENST00000535143 CRKLP46109 303 aaKnown RBP23.5■■□□□ 1.35
MSRB3-204ENST00000535143 DDR1Q08345 913 aa23.5■■□□□ 1.35
MSRB3-204ENST00000535143 FKBP8Q14318 412 aa23.5■■□□□ 1.35
MSRB3-204ENST00000535143 DNAJC5GQ8N7S2 189 aa23.5■■□□□ 1.35
MSRB3-204ENST00000535143 CHRNA5P30532 468 aa23.48■■□□□ 1.35
MSRB3-204ENST00000535143 MTHFSP49914 203 aa23.48■■□□□ 1.35
MSRB3-204ENST00000535143 USP42Q9H9J4 1324 aaKnown RBP23.48■■□□□ 1.35
MSRB3-204ENST00000535143 NFATC2IPQ8NCF5 419 aa23.47■■□□□ 1.35
MSRB3-204ENST00000535143 PIM2Q9P1W9 311 aa23.47■■□□□ 1.35
MSRB3-204ENST00000535143 AMOTQ4VCS5 1084 aa23.46■■□□□ 1.35
MSRB3-204ENST00000535143 DALRD3Q5D0E6 543 aaKnown RBP23.46■■□□□ 1.35
MSRB3-204ENST00000535143 C1orf141Q5JVX7 400 aa23.46■■□□□ 1.35
MSRB3-204ENST00000535143 SCN11AQ9UI33 1791 aa23.46■■□□□ 1.35
MSRB3-204ENST00000535143 ADAMTS7Q9UKP4 1686 aa23.46■■□□□ 1.35
MSRB3-204ENST00000535143 SBF1O95248 1867 aa23.45■■□□□ 1.35
MSRB3-204ENST00000535143 C16orf71Q8IYS4 520 aaPredicted RBP23.45■■□□□ 1.34
MSRB3-204ENST00000535143 PANK3Q9H999 370 aa23.45■■□□□ 1.34
MSRB3-204ENST00000535143 RNF181Q9P0P0 153 aa23.45■■□□□ 1.34
MSRB3-204ENST00000535143 RBM46Q8TBY0 533 aaKnown RBP23.44■■□□□ 1.34
MSRB3-204ENST00000535143 SULT6B1Q6IMI4 303 aa23.43■■□□□ 1.34
MSRB3-204ENST00000535143 AFDNP55196 1824 aaKnown RBP23.42■■□□□ 1.34
MSRB3-204ENST00000535143 VIRMAQ69YN4 1812 aaKnown RBP23.42■■□□□ 1.34
MSRB3-204ENST00000535143 TNRC6CQ9HCJ0 1690 aaKnown RBP23.41■■□□□ 1.34
MSRB3-204ENST00000535143 POLRMTO00411 1230 aaKnown RBP23.41■■□□□ 1.34
MSRB3-204ENST00000535143 INTS5Q6P9B9 1019 aaKnown RBP23.41■■□□□ 1.34
MSRB3-204ENST00000535143 DNAJC10Q8IXB1 793 aa23.41■■□□□ 1.34
MSRB3-204ENST00000535143 RRAGCQ9HB90 399 aa23.41■■□□□ 1.34
MSRB3-204ENST00000535143 RASSF7Q02833 373 aa23.4■■□□□ 1.34
MSRB3-204ENST00000535143 KDM2BQ8NHM5 1336 aa23.39■■□□□ 1.34
MSRB3-204ENST00000535143 USPL1Q5W0Q7 1092 aa23.39■■□□□ 1.33
MSRB3-204ENST00000535143 MORC1Q86VD1 984 aa23.39■■□□□ 1.33
MSRB3-204ENST00000535143 TRIM26Q12899 539 aaPredicted RBP23.38■■□□□ 1.33
MSRB3-204ENST00000535143 KLRG1Q96E93 195 aa23.38■■□□□ 1.33
MSRB3-204ENST00000535143 HSPA5P11021 654 aaKnown RBP23.37■■□□□ 1.33
MSRB3-204ENST00000535143 ZPR1O75312 459 aa23.36■■□□□ 1.33
MSRB3-204ENST00000535143 TM4SF1P30408 202 aa23.36■■□□□ 1.33
MSRB3-204ENST00000535143 SOS1Q07889 1333 aaPredicted RBP23.35■■□□□ 1.33
MSRB3-204ENST00000535143 IL13P35225 146 aa23.35■■□□□ 1.33
MSRB3-204ENST00000535143 FSTL1Q12841 308 aa23.35■■□□□ 1.33
MSRB3-204ENST00000535143 SLC39A6Q13433 755 aa23.35■■□□□ 1.33
MSRB3-204ENST00000535143 LGR6Q9HBX8 967 aa23.34■■□□□ 1.33
MSRB3-204ENST00000535143 TIMELESSQ9UNS1 1208 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms