RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 RLBP1P12271 317 aa26.07■■□□□ 1.76
TNFRSF1A-205ENST00000534885 MRPL50Q8N5N7 158 aaKnown RBP26.07■■□□□ 1.76
TNFRSF1A-205ENST00000534885 CLUAP1Q96AJ1 413 aa26.07■■□□□ 1.76
TNFRSF1A-205ENST00000534885 BRPF1P55201 1214 aaPredicted RBP26.07■■□□□ 1.76
TNFRSF1A-205ENST00000534885 DCAF5Q96JK2 942 aa26.07■■□□□ 1.76
TNFRSF1A-205ENST00000534885 DISP2A7MBM2 1401 aa26.06■■□□□ 1.76
TNFRSF1A-205ENST00000534885 KCNQ3O43525 872 aa26.06■■□□□ 1.76
TNFRSF1A-205ENST00000534885 TRIM27P14373 513 aa26.05■■□□□ 1.76
TNFRSF1A-205ENST00000534885 SLC52A2Q9HAB3 445 aa26.05■■□□□ 1.76
TNFRSF1A-205ENST00000534885 LRP6O75581 1613 aa26.04■■□□□ 1.76
TNFRSF1A-205ENST00000534885 HSP90AB1P08238 724 aaKnown RBP26.04■■□□□ 1.76
TNFRSF1A-205ENST00000534885 WNK3Q9BYP7 1800 aa26.04■■□□□ 1.76
TNFRSF1A-205ENST00000534885 ATF7IPQ6VMQ6 1270 aa26.03■■□□□ 1.76
TNFRSF1A-205ENST00000534885 DDX54Q8TDD1 881 aaKnown RBP26.03■■□□□ 1.76
TNFRSF1A-205ENST00000534885 COG6Q9Y2V7 657 aa26.03■■□□□ 1.76
TNFRSF1A-205ENST00000534885 SPATA31A6Q5VVP1 1343 aa26.03■■□□□ 1.76
TNFRSF1A-205ENST00000534885 MRC1P22897 1456 aa26.03■■□□□ 1.76
TNFRSF1A-205ENST00000534885 EIF4A1P60842 406 aaKnown RBP26.03■■□□□ 1.76
TNFRSF1A-205ENST00000534885 C8orf37Q96NL8 207 aa26.03■■□□□ 1.76
TNFRSF1A-205ENST00000534885 NFATC2IPQ8NCF5 419 aa26.02■■□□□ 1.76
TNFRSF1A-205ENST00000534885 SPATA31A1Q5TZJ5 1347 aa26.02■■□□□ 1.76
TNFRSF1A-205ENST00000534885 CCDC136Q96JN2 1154 aa26.01■■□□□ 1.75
TNFRSF1A-205ENST00000534885 DZIP1LQ8IYY4 767 aaKnown RBP26■■□□□ 1.75
TNFRSF1A-205ENST00000534885 IPO8O15397 1037 aaKnown RBP26■■□□□ 1.75
TNFRSF1A-205ENST00000534885 FTSJ3Q8IY81 847 aaKnown RBP26■■□□□ 1.75
TNFRSF1A-205ENST00000534885 NGLY1Q96IV0 654 aa26■■□□□ 1.75
TNFRSF1A-205ENST00000534885 NKX1-1Q15270 411 aaPredicted RBP25.98■■□□□ 1.75
TNFRSF1A-205ENST00000534885 SPATA31A5Q5VU36 1347 aa25.97■■□□□ 1.75
TNFRSF1A-205ENST00000534885 SPATA31A7Q8IWB4 1347 aa25.97■■□□□ 1.75
TNFRSF1A-205ENST00000534885 SOS1Q07889 1333 aaPredicted RBP25.97■■□□□ 1.75
TNFRSF1A-205ENST00000534885 BCL9LQ86UU0 1499 aa25.97■■□□□ 1.75
TNFRSF1A-205ENST00000534885 SLC39A6Q13433 755 aa25.97■■□□□ 1.75
TNFRSF1A-205ENST00000534885 UNC5CLQ8IV45 518 aa25.97■■□□□ 1.75
TNFRSF1A-205ENST00000534885 NECTIN2Q92692 538 aa25.97■■□□□ 1.75
TNFRSF1A-205ENST00000534885 MS4A1P11836 297 aa25.95■■□□□ 1.75
TNFRSF1A-205ENST00000534885 CABP4P57796 275 aa25.95■■□□□ 1.75
TNFRSF1A-205ENST00000534885 ARHGAP45Q92619 1136 aa25.95■■□□□ 1.75
TNFRSF1A-205ENST00000534885 CCDC9Q9Y3X0 531 aaKnown RBP25.95■■□□□ 1.75
TNFRSF1A-205ENST00000534885 TOGARAM1Q9Y4F4 1720 aa25.95■■□□□ 1.74
TNFRSF1A-205ENST00000534885 SLC4A2P04920 1241 aa25.95■■□□□ 1.74
TNFRSF1A-205ENST00000534885 ZNF790Q6PG37 636 aa25.95■■□□□ 1.74
TNFRSF1A-205ENST00000534885 THRAP3Q9Y2W1 955 aaKnown RBP25.95■■□□□ 1.74
TNFRSF1A-205ENST00000534885 MVPQ14764 893 aaKnown RBP25.94■■□□□ 1.74
TNFRSF1A-205ENST00000534885 CCDC30Q5VVM6 783 aa25.94■■□□□ 1.74
TNFRSF1A-205ENST00000534885 FNBP4Q8N3X1 1017 aaPredicted RBP25.94■■□□□ 1.74
TNFRSF1A-205ENST00000534885 HEG1Q9ULI3 1381 aa25.94■■□□□ 1.74
TNFRSF1A-205ENST00000534885 HDGFL1Q5TGJ6 251 aa25.92■■□□□ 1.74
TNFRSF1A-205ENST00000534885 TMEM57Q8N5G2 664 aa25.92■■□□□ 1.74
TNFRSF1A-205ENST00000534885 TNS2Q63HR2 1409 aa25.92■■□□□ 1.74
TNFRSF1A-205ENST00000534885 EXOC5O00471 708 aa25.92■■□□□ 1.74
TNFRSF1A-205ENST00000534885 ERVV-2B6SEH9 535 aa25.91■■□□□ 1.74
TNFRSF1A-205ENST00000534885 HOXB7P09629 217 aa25.91■■□□□ 1.74
TNFRSF1A-205ENST00000534885 STK31Q9BXU1 1019 aa25.91■■□□□ 1.74
TNFRSF1A-205ENST00000534885 CACNA1FO60840 1977 aa25.91■■□□□ 1.74
TNFRSF1A-205ENST00000534885 GIGYF1O75420 1035 aaPredicted RBP25.91■■□□□ 1.74
TNFRSF1A-205ENST00000534885 EIF2S2P20042 333 aaKnown RBP25.91■■□□□ 1.74
TNFRSF1A-205ENST00000534885 G2E3Q7L622 706 aa25.91■■□□□ 1.74
TNFRSF1A-205ENST00000534885 ITPRIPQ8IWB1 547 aa25.9■■□□□ 1.74
TNFRSF1A-205ENST00000534885 CDCA7Q9BWT1 371 aaPredicted RBP25.9■■□□□ 1.74
TNFRSF1A-205ENST00000534885 RGS12O14924 1447 aa25.89■■□□□ 1.74
TNFRSF1A-205ENST00000534885 PRAMEF22A3QJZ6 481 aa25.89■■□□□ 1.74
TNFRSF1A-205ENST00000534885 VPS72Q15906 364 aa25.89■■□□□ 1.73
TNFRSF1A-205ENST00000534885 ABCC4O15439 1325 aa25.89■■□□□ 1.73
TNFRSF1A-205ENST00000534885 MEX3CQ5U5Q3 659 aaKnown RBP25.88■■□□□ 1.73
TNFRSF1A-205ENST00000534885 BARGINQ6ZT62 677 aa25.88■■□□□ 1.73
TNFRSF1A-205ENST00000534885 API5Q9BZZ5 524 aaKnown RBP25.88■■□□□ 1.73
TNFRSF1A-205ENST00000534885 ZNF496Q96IT1 587 aaPredicted RBP25.87■■□□□ 1.73
TNFRSF1A-205ENST00000534885 USP21Q9UK80 565 aa25.87■■□□□ 1.73
TNFRSF1A-205ENST00000534885 C5P01031 1676 aa25.87■■□□□ 1.73
TNFRSF1A-205ENST00000534885 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.87■■□□□ 1.73
TNFRSF1A-205ENST00000534885 TTC5Q8N0Z6 440 aa25.87■■□□□ 1.73
TNFRSF1A-205ENST00000534885 PTPRCP08575 1304 aa25.87■■□□□ 1.73
TNFRSF1A-205ENST00000534885 DDB1Q16531 1140 aa25.86■■□□□ 1.73
TNFRSF1A-205ENST00000534885 ITGB4P16144 1822 aa25.85■■□□□ 1.73
TNFRSF1A-205ENST00000534885 DDX19BQ9UMR2 479 aa25.85■■□□□ 1.73
TNFRSF1A-205ENST00000534885 PAPPAQ13219 1627 aa25.85■■□□□ 1.73
TNFRSF1A-205ENST00000534885 CHPF2Q9P2E5 772 aa25.84■■□□□ 1.73
TNFRSF1A-205ENST00000534885 KAT6BQ8WYB5 2073 aa25.84■■□□□ 1.73
TNFRSF1A-205ENST00000534885 FLIIQ13045 1269 aa25.84■■□□□ 1.73
TNFRSF1A-205ENST00000534885 FAM98CQ17RN3 349 aaKnown RBP25.84■■□□□ 1.73
TNFRSF1A-205ENST00000534885 GLI3P10071 1580 aa25.84■■□□□ 1.73
TNFRSF1A-205ENST00000534885 UBR2Q8IWV8 1755 aa25.83■■□□□ 1.73
TNFRSF1A-205ENST00000534885 TMOD3Q9NYL9 352 aa25.82■■□□□ 1.72
TNFRSF1A-205ENST00000534885 FMNL2Q96PY5 1086 aa25.81■■□□□ 1.72
TNFRSF1A-205ENST00000534885 PHAXQ9H814 394 aaKnown RBP25.81■■□□□ 1.72
TNFRSF1A-205ENST00000534885 AAMPQ13685 434 aa25.81■■□□□ 1.72
TNFRSF1A-205ENST00000534885 CHMP4AQ9BY43 222 aa25.81■■□□□ 1.72
TNFRSF1A-205ENST00000534885 AFF2P51816 1311 aa25.8■■□□□ 1.72
TNFRSF1A-205ENST00000534885 ANXA1P04083 346 aa25.8■■□□□ 1.72
TNFRSF1A-205ENST00000534885 DOT1LQ8TEK3 1739 aa25.8■■□□□ 1.72
TNFRSF1A-205ENST00000534885 F6X3S4 739 aa25.79■■□□□ 1.72
TNFRSF1A-205ENST00000534885 KCPQ6ZWJ8 1503 aa25.79■■□□□ 1.72
TNFRSF1A-205ENST00000534885 FKBP5Q13451 457 aaPredicted RBP25.79■■□□□ 1.72
TNFRSF1A-205ENST00000534885 MARCH10Q8NA82 808 aaPredicted RBP25.79■■□□□ 1.72
TNFRSF1A-205ENST00000534885 PIGBQ92521 554 aa25.79■■□□□ 1.72
TNFRSF1A-205ENST00000534885 PCDHB15Q9Y5E8 787 aa25.79■■□□□ 1.72
TNFRSF1A-205ENST00000534885 SNRPA1P09661 255 aaKnown RBP25.78■■□□□ 1.72
TNFRSF1A-205ENST00000534885 DBF4Q9UBU7 674 aaPredicted RBP25.78■■□□□ 1.72
TNFRSF1A-205ENST00000534885 KDM2BQ8NHM5 1336 aa25.77■■□□□ 1.72
TNFRSF1A-205ENST00000534885 PROSER3Q2NL68 480 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms