RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 ERVV-2B6SEH9 535 aa19.11■□□□□ 0.65
CCDC84-208ENST00000534656 ADCY9O60503 1353 aa19.09■□□□□ 0.65
CCDC84-208ENST00000534656 KDRP35968 1356 aa19.09■□□□□ 0.65
CCDC84-208ENST00000534656 HSP90AB1P08238 724 aaKnown RBP19.09■□□□□ 0.65
CCDC84-208ENST00000534656 EIF4G2P78344 907 aaKnown RBP eCLIP19.09■□□□□ 0.65
CCDC84-208ENST00000534656 DCAF5Q96JK2 942 aa19.09■□□□□ 0.65
CCDC84-208ENST00000534656 PCGF6Q9BYE7 350 aa19.09■□□□□ 0.65
CCDC84-208ENST00000534656 PANK3Q9H999 370 aa19.09■□□□□ 0.65
CCDC84-208ENST00000534656 GPBP1L1Q9HC44 474 aaPredicted RBP19.09■□□□□ 0.65
CCDC84-208ENST00000534656 WWC3Q9ULE0 1092 aa19.09■□□□□ 0.65
CCDC84-208ENST00000534656 MMP10P09238 476 aa19.08■□□□□ 0.64
CCDC84-208ENST00000534656 PLEKHO1Q53GL0 409 aaPredicted RBP19.08■□□□□ 0.64
CCDC84-208ENST00000534656 SLC4A9Q96Q91 983 aa19.08■□□□□ 0.64
CCDC84-208ENST00000534656 RBM42Q9BTD8 480 aaKnown RBP19.08■□□□□ 0.64
CCDC84-208ENST00000534656 RTCBQ9Y3I0 505 aaKnown RBP19.08■□□□□ 0.64
CCDC84-208ENST00000534656 HSPA5P11021 654 aaKnown RBP19.07■□□□□ 0.64
CCDC84-208ENST00000534656 TRAPPC3LQ5T215 181 aa19.07■□□□□ 0.64
CCDC84-208ENST00000534656 RC3H1Q5TC82 1133 aaKnown RBP19.07■□□□□ 0.64
CCDC84-208ENST00000534656 ZNF831Q5JPB2 1677 aa19.06■□□□□ 0.64
CCDC84-208ENST00000534656 AMOTQ4VCS5 1084 aa19.06■□□□□ 0.64
CCDC84-208ENST00000534656 NLGN1Q8N2Q7 840 aa19.06■□□□□ 0.64
CCDC84-208ENST00000534656 ZNF530Q6P9A1 599 aaPredicted RBP19.05■□□□□ 0.64
CCDC84-208ENST00000534656 KDM6AO15550 1401 aaPredicted RBP19.04■□□□□ 0.64
CCDC84-208ENST00000534656 ADRA2BP18089 450 aa19.04■□□□□ 0.64
CCDC84-208ENST00000534656 CABP4P57796 275 aa19.04■□□□□ 0.64
CCDC84-208ENST00000534656 ZNF526Q8TF50 670 aaPredicted RBP19.04■□□□□ 0.64
CCDC84-208ENST00000534656 ARHGEF1Q92888 912 aaKnown RBP19.04■□□□□ 0.64
CCDC84-208ENST00000534656 CNTNAP4Q9C0A0 1308 aa19.03■□□□□ 0.64
CCDC84-208ENST00000534656 RPS6KA4O75676 772 aa19.03■□□□□ 0.64
CCDC84-208ENST00000534656 TGFB2P61812 414 aa19.03■□□□□ 0.64
CCDC84-208ENST00000534656 MORC1Q86VD1 984 aa19.03■□□□□ 0.64
CCDC84-208ENST00000534656 MTHFSP49914 203 aa19.02■□□□□ 0.64
CCDC84-208ENST00000534656 PXDNLA1KZ92 1463 aa19.02■□□□□ 0.63
CCDC84-208ENST00000534656 CICQ96RK0 1608 aaPredicted RBP19.01■□□□□ 0.63
CCDC84-208ENST00000534656 COL5A3P25940 1745 aaPredicted RBP19.01■□□□□ 0.63
CCDC84-208ENST00000534656 GYS1P13807 737 aa19.01■□□□□ 0.63
CCDC84-208ENST00000534656 RFC4P35249 363 aa19.01■□□□□ 0.63
CCDC84-208ENST00000534656 C1orf141Q5JVX7 400 aa19.01■□□□□ 0.63
CCDC84-208ENST00000534656 AEBP1Q8IUX7 1158 aa19.01■□□□□ 0.63
CCDC84-208ENST00000534656 KIF13BQ9NQT8 1826 aa19.01■□□□□ 0.63
CCDC84-208ENST00000534656 C10orf71Q711Q0 1435 aa19■□□□□ 0.63
CCDC84-208ENST00000534656 A0A0G2JLW4 131 aa18.99■□□□□ 0.63
CCDC84-208ENST00000534656 PTCD1O75127 700 aaKnown RBP18.99■□□□□ 0.63
CCDC84-208ENST00000534656 NFATC2IPQ8NCF5 419 aa18.99■□□□□ 0.63
CCDC84-208ENST00000534656 CCDC87Q9NVE4 849 aa18.99■□□□□ 0.63
CCDC84-208ENST00000534656 KIAA1551Q9HCM1 1747 aa18.99■□□□□ 0.63
CCDC84-208ENST00000534656 SULT6B1Q6IMI4 303 aa18.98■□□□□ 0.63
CCDC84-208ENST00000534656 BCS1LQ9Y276 419 aa18.98■□□□□ 0.63
CCDC84-208ENST00000534656 KNSTRNQ9Y448 316 aa18.98■□□□□ 0.63
CCDC84-208ENST00000534656 PARP3Q9Y6F1 533 aa18.98■□□□□ 0.63
CCDC84-208ENST00000534656 HSPA6P17066 643 aa18.97■□□□□ 0.63
CCDC84-208ENST00000534656 CRKLP46109 303 aaKnown RBP18.97■□□□□ 0.63
CCDC84-208ENST00000534656 C4AP0C0L4 1744 aa18.97■□□□□ 0.63
CCDC84-208ENST00000534656 CEP350Q5VT06 3117 aa18.96■□□□□ 0.63
CCDC84-208ENST00000534656 N4BP2Q86UW6 1770 aaPredicted RBP18.96■□□□□ 0.63
CCDC84-208ENST00000534656 KIF3CO14782 793 aa18.96■□□□□ 0.63
CCDC84-208ENST00000534656 DPEP1P16444 411 aa18.96■□□□□ 0.63
CCDC84-208ENST00000534656 IL13P35225 146 aa18.96■□□□□ 0.63
CCDC84-208ENST00000534656 MYH14Q7Z406 1995 aaKnown RBP18.94■□□□□ 0.62
CCDC84-208ENST00000534656 ARHGAP27Q6ZUM4 889 aa18.94■□□□□ 0.62
CCDC84-208ENST00000534656 FCHSD2O94868 740 aa18.93■□□□□ 0.62
CCDC84-208ENST00000534656 AKAP4Q5JQC9 854 aa18.93■□□□□ 0.62
CCDC84-208ENST00000534656 SRP68Q9UHB9 627 aaKnown RBP18.93■□□□□ 0.62
CCDC84-208ENST00000534656 USP42Q9H9J4 1324 aaKnown RBP18.93■□□□□ 0.62
CCDC84-208ENST00000534656 KCNA3P22001 575 aa18.92■□□□□ 0.62
CCDC84-208ENST00000534656 FKBP8Q14318 412 aa18.91■□□□□ 0.62
CCDC84-208ENST00000534656 AMER1Q5JTC6 1135 aaPredicted RBP18.91■□□□□ 0.62
CCDC84-208ENST00000534656 INTS5Q6P9B9 1019 aaKnown RBP18.91■□□□□ 0.62
CCDC84-208ENST00000534656 TJP1Q07157 1748 aa18.91■□□□□ 0.62
CCDC84-208ENST00000534656 SLC52A2Q9HAB3 445 aa18.9■□□□□ 0.62
CCDC84-208ENST00000534656 LGR6Q9HBX8 967 aa18.9■□□□□ 0.62
CCDC84-208ENST00000534656 PIM2Q9P1W9 311 aa18.9■□□□□ 0.62
CCDC84-208ENST00000534656 SCN11AQ9UI33 1791 aa18.9■□□□□ 0.62
CCDC84-208ENST00000534656 DDR1Q08345 913 aa18.89■□□□□ 0.61
CCDC84-208ENST00000534656 CCER1Q8TC90 406 aaPredicted RBP18.89■□□□□ 0.61
CCDC84-208ENST00000534656 BRCA1P38398 1863 aaKnown RBP18.88■□□□□ 0.61
CCDC84-208ENST00000534656 IFFO2Q5TF58 517 aa18.88■□□□□ 0.61
CCDC84-208ENST00000534656 DNAJC10Q8IXB1 793 aa18.88■□□□□ 0.61
CCDC84-208ENST00000534656 RNMTO43148 476 aaKnown RBP18.87■□□□□ 0.61
CCDC84-208ENST00000534656 TOMM70O94826 608 aa18.87■□□□□ 0.61
CCDC84-208ENST00000534656 TM4SF1P30408 202 aa18.87■□□□□ 0.61
CCDC84-208ENST00000534656 ADAMTS7Q9UKP4 1686 aa18.86■□□□□ 0.61
CCDC84-208ENST00000534656 POLRMTO00411 1230 aaKnown RBP18.86■□□□□ 0.61
CCDC84-208ENST00000534656 ZPR1O75312 459 aa18.86■□□□□ 0.61
CCDC84-208ENST00000534656 HMOX1P09601 288 aa18.86■□□□□ 0.61
CCDC84-208ENST00000534656 DALRD3Q5D0E6 543 aaKnown RBP18.86■□□□□ 0.61
CCDC84-208ENST00000534656 MRC1P22897 1456 aa18.85■□□□□ 0.61
CCDC84-208ENST00000534656 SOS1Q07889 1333 aaPredicted RBP18.85■□□□□ 0.61
CCDC84-208ENST00000534656 KIF7Q2M1P5 1343 aa18.85■□□□□ 0.61
CCDC84-208ENST00000534656 CYP19A1P11511 503 aaPredicted RBP18.85■□□□□ 0.61
CCDC84-208ENST00000534656 SLC39A6Q13433 755 aa18.85■□□□□ 0.61
CCDC84-208ENST00000534656 C9orf131Q5VYM1 1079 aa18.85■□□□□ 0.61
CCDC84-208ENST00000534656 USPL1Q5W0Q7 1092 aa18.85■□□□□ 0.61
CCDC84-208ENST00000534656 ARFGEF1Q9Y6D6 1849 aa18.84■□□□□ 0.61
CCDC84-208ENST00000534656 NMRK2Q9NPI5 230 aa18.84■□□□□ 0.61
CCDC84-208ENST00000534656 PER1O15534 1290 aaPredicted RBP18.83■□□□□ 0.6
CCDC84-208ENST00000534656 CHRNA5P30532 468 aa18.83■□□□□ 0.6
CCDC84-208ENST00000534656 APLP1P51693 650 aa18.83■□□□□ 0.6
CCDC84-208ENST00000534656 MTHFSDQ2M296 383 aaKnown RBP18.83■□□□□ 0.6
CCDC84-208ENST00000534656 DIAPH1O60610 1272 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 236.4 ms