RNA–Protein interactions for RNA: ENST00000534295.1

SCUBE2-213, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 4

Gene SCUBE2, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-213ENST00000534295 PLEKHG2Q9H7P9 1386 aa17.11■□□□□ 0.33
SCUBE2-213ENST00000534295 KIF3CO14782 793 aa17.1■□□□□ 0.33
SCUBE2-213ENST00000534295 ATP6V1AP38606 617 aa17.1■□□□□ 0.33
SCUBE2-213ENST00000534295 POLR3GLQ9BT43 218 aa17.1■□□□□ 0.33
SCUBE2-213ENST00000534295 ASAP1Q9ULH1 1129 aa17.1■□□□□ 0.33
SCUBE2-213ENST00000534295 CEP350Q5VT06 3117 aa17.09■□□□□ 0.33
SCUBE2-213ENST00000534295 GNPATO15228 680 aa17.08■□□□□ 0.32
SCUBE2-213ENST00000534295 PHKG2P15735 406 aa17.08■□□□□ 0.32
SCUBE2-213ENST00000534295 ATG3Q9NT62 314 aa17.08■□□□□ 0.32
SCUBE2-213ENST00000534295 POLKQ9UBT6 870 aa17.08■□□□□ 0.32
SCUBE2-213ENST00000534295 CICQ96RK0 1608 aaPredicted RBP17.07■□□□□ 0.32
SCUBE2-213ENST00000534295 TNNT2P45379 298 aaPredicted RBP17.07■□□□□ 0.32
SCUBE2-213ENST00000534295 TGFB2P61812 414 aa17.07■□□□□ 0.32
SCUBE2-213ENST00000534295 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
SCUBE2-213ENST00000534295 MMP10P09238 476 aa17.06■□□□□ 0.32
SCUBE2-213ENST00000534295 ZNF526Q8TF50 670 aaPredicted RBP17.06■□□□□ 0.32
SCUBE2-213ENST00000534295 WWC3Q9ULE0 1092 aa17.06■□□□□ 0.32
SCUBE2-213ENST00000534295 KDRP35968 1356 aa17.05■□□□□ 0.32
SCUBE2-213ENST00000534295 EIF4A2Q14240 407 aaKnown RBP17.05■□□□□ 0.32
SCUBE2-213ENST00000534295 RC3H1Q5TC82 1133 aaKnown RBP17.05■□□□□ 0.32
SCUBE2-213ENST00000534295 NLGN1Q8N2Q7 840 aa17.05■□□□□ 0.32
SCUBE2-213ENST00000534295 PXDNLA1KZ92 1463 aa17.05■□□□□ 0.32
SCUBE2-213ENST00000534295 ERVV-2B6SEH9 535 aa17.04■□□□□ 0.32
SCUBE2-213ENST00000534295 HSP90AB1P08238 724 aaKnown RBP17.04■□□□□ 0.32
SCUBE2-213ENST00000534295 ADRA2BP18089 450 aa17.04■□□□□ 0.32
SCUBE2-213ENST00000534295 SLC4A9Q96Q91 983 aa17.04■□□□□ 0.32
SCUBE2-213ENST00000534295 TRAPPC3LQ5T215 181 aa17.03■□□□□ 0.32
SCUBE2-213ENST00000534295 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
SCUBE2-213ENST00000534295 RTCBQ9Y3I0 505 aaKnown RBP17.03■□□□□ 0.32
SCUBE2-213ENST00000534295 PLEKHO1Q53GL0 409 aaPredicted RBP17.02■□□□□ 0.32
SCUBE2-213ENST00000534295 KIF13BQ9NQT8 1826 aa17.01■□□□□ 0.31
SCUBE2-213ENST00000534295 ARHGEF1Q92888 912 aaKnown RBP17.01■□□□□ 0.31
SCUBE2-213ENST00000534295 DCAF5Q96JK2 942 aa17.01■□□□□ 0.31
SCUBE2-213ENST00000534295 C10orf71Q711Q0 1435 aa17.01■□□□□ 0.31
SCUBE2-213ENST00000534295 ZNF831Q5JPB2 1677 aa17.01■□□□□ 0.31
SCUBE2-213ENST00000534295 CNTNAP4Q9C0A0 1308 aa17■□□□□ 0.31
SCUBE2-213ENST00000534295 RPS6KA4O75676 772 aa17■□□□□ 0.31
SCUBE2-213ENST00000534295 TOMM70O94826 608 aa17■□□□□ 0.31
SCUBE2-213ENST00000534295 APLP1P51693 650 aa17■□□□□ 0.31
SCUBE2-213ENST00000534295 DNAJC5GQ8N7S2 189 aa17■□□□□ 0.31
SCUBE2-213ENST00000534295 PANK3Q9H999 370 aa17■□□□□ 0.31
SCUBE2-213ENST00000534295 NPC1L1Q9UHC9 1359 aa17■□□□□ 0.31
SCUBE2-213ENST00000534295 A0A0G2JLW4 131 aa16.99■□□□□ 0.31
SCUBE2-213ENST00000534295 GYS1P13807 737 aa16.99■□□□□ 0.31
SCUBE2-213ENST00000534295 CABP4P57796 275 aa16.99■□□□□ 0.31
SCUBE2-213ENST00000534295 AMOTQ4VCS5 1084 aa16.99■□□□□ 0.31
SCUBE2-213ENST00000534295 KIAA1551Q9HCM1 1747 aa16.99■□□□□ 0.31
SCUBE2-213ENST00000534295 KCNA3P22001 575 aa16.98■□□□□ 0.31
SCUBE2-213ENST00000534295 RFC4P35249 363 aa16.98■□□□□ 0.31
SCUBE2-213ENST00000534295 ZNF530Q6P9A1 599 aaPredicted RBP16.98■□□□□ 0.31
SCUBE2-213ENST00000534295 CCDC87Q9NVE4 849 aa16.98■□□□□ 0.31
SCUBE2-213ENST00000534295 DPEP1P16444 411 aa16.97■□□□□ 0.31
SCUBE2-213ENST00000534295 C1orf141Q5JVX7 400 aa16.97■□□□□ 0.31
SCUBE2-213ENST00000534295 BCS1LQ9Y276 419 aa16.97■□□□□ 0.31
SCUBE2-213ENST00000534295 PER1O15534 1290 aaPredicted RBP16.96■□□□□ 0.31
SCUBE2-213ENST00000534295 MTHFSP49914 203 aa16.96■□□□□ 0.31
SCUBE2-213ENST00000534295 PARP3Q9Y6F1 533 aa16.96■□□□□ 0.31
SCUBE2-213ENST00000534295 N4BP2Q86UW6 1770 aaPredicted RBP16.95■□□□□ 0.3
SCUBE2-213ENST00000534295 ARHGAP27Q6ZUM4 889 aa16.95■□□□□ 0.3
SCUBE2-213ENST00000534295 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
SCUBE2-213ENST00000534295 KNSTRNQ9Y448 316 aa16.94■□□□□ 0.3
SCUBE2-213ENST00000534295 KDM6AO15550 1401 aaPredicted RBP16.94■□□□□ 0.3
SCUBE2-213ENST00000534295 COL5A3P25940 1745 aaPredicted RBP16.93■□□□□ 0.3
SCUBE2-213ENST00000534295 PTCD1O75127 700 aaKnown RBP16.93■□□□□ 0.3
SCUBE2-213ENST00000534295 FCHSD2O94868 740 aa16.93■□□□□ 0.3
SCUBE2-213ENST00000534295 RBM46Q8TBY0 533 aaKnown RBP16.93■□□□□ 0.3
SCUBE2-213ENST00000534295 NMRK2Q9NPI5 230 aa16.93■□□□□ 0.3
SCUBE2-213ENST00000534295 MYH14Q7Z406 1995 aaKnown RBP16.92■□□□□ 0.3
SCUBE2-213ENST00000534295 NFATC2IPQ8NCF5 419 aa16.92■□□□□ 0.3
SCUBE2-213ENST00000534295 PIM2Q9P1W9 311 aa16.92■□□□□ 0.3
SCUBE2-213ENST00000534295 C4AP0C0L4 1744 aa16.92■□□□□ 0.3
SCUBE2-213ENST00000534295 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
SCUBE2-213ENST00000534295 C9orf131Q5VYM1 1079 aa16.91■□□□□ 0.3
SCUBE2-213ENST00000534295 SULT6B1Q6IMI4 303 aa16.91■□□□□ 0.3
SCUBE2-213ENST00000534295 CRKLP46109 303 aaKnown RBP16.9■□□□□ 0.3
SCUBE2-213ENST00000534295 AEBP1Q8IUX7 1158 aa16.9■□□□□ 0.3
SCUBE2-213ENST00000534295 USP42Q9H9J4 1324 aaKnown RBP16.9■□□□□ 0.3
SCUBE2-213ENST00000534295 BRCA1P38398 1863 aaKnown RBP16.89■□□□□ 0.29
SCUBE2-213ENST00000534295 TM4SF1P30408 202 aa16.89■□□□□ 0.29
SCUBE2-213ENST00000534295 DDR1Q08345 913 aa16.89■□□□□ 0.29
SCUBE2-213ENST00000534295 FSTL1Q12841 308 aa16.89■□□□□ 0.29
SCUBE2-213ENST00000534295 DDX10Q13206 875 aaKnown RBP16.89■□□□□ 0.29
SCUBE2-213ENST00000534295 FKBP8Q14318 412 aa16.89■□□□□ 0.29
SCUBE2-213ENST00000534295 DALRD3Q5D0E6 543 aaKnown RBP16.88■□□□□ 0.29
SCUBE2-213ENST00000534295 INTS5Q6P9B9 1019 aaKnown RBP16.88■□□□□ 0.29
SCUBE2-213ENST00000534295 JMYQ8N9B5 988 aa16.87■□□□□ 0.29
SCUBE2-213ENST00000534295 SRP68Q9UHB9 627 aaKnown RBP16.87■□□□□ 0.29
SCUBE2-213ENST00000534295 POLRMTO00411 1230 aaKnown RBP16.86■□□□□ 0.29
SCUBE2-213ENST00000534295 SCN11AQ9UI33 1791 aa16.86■□□□□ 0.29
SCUBE2-213ENST00000534295 ARFGEF1Q9Y6D6 1849 aa16.86■□□□□ 0.29
SCUBE2-213ENST00000534295 ZPR1O75312 459 aa16.85■□□□□ 0.29
SCUBE2-213ENST00000534295 IL13P35225 146 aa16.85■□□□□ 0.29
SCUBE2-213ENST00000534295 AKAP4Q5JQC9 854 aa16.85■□□□□ 0.29
SCUBE2-213ENST00000534295 KLRG1Q96E93 195 aa16.85■□□□□ 0.29
SCUBE2-213ENST00000534295 KDM2BQ8NHM5 1336 aa16.85■□□□□ 0.29
SCUBE2-213ENST00000534295 CHRNA5P30532 468 aa16.83■□□□□ 0.28
SCUBE2-213ENST00000534295 C16orf71Q8IYS4 520 aaPredicted RBP16.83■□□□□ 0.28
SCUBE2-213ENST00000534295 RNF181Q9P0P0 153 aa16.83■□□□□ 0.28
SCUBE2-213ENST00000534295 ZC3H4Q9UPT8 1303 aaKnown RBP16.83■□□□□ 0.28
SCUBE2-213ENST00000534295 TJP1Q07157 1748 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms