RNA–Protein interactions for RNA: ENST00000534290.1

NCAPD3-212, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 352 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-212ENST00000534290 RTL1A6NKG5 1358 aa13.93□□□□□ -0.18
NCAPD3-212ENST00000534290 CD2APQ9Y5K6 639 aa13.92□□□□□ -0.18
NCAPD3-212ENST00000534290 COL24A1Q17RW2 1714 aa13.92□□□□□ -0.18
NCAPD3-212ENST00000534290 LY75O60449 1722 aa13.91□□□□□ -0.18
NCAPD3-212ENST00000534290 DOT1LQ8TEK3 1739 aa13.91□□□□□ -0.18
NCAPD3-212ENST00000534290 RUNDC1Q96C34 613 aa13.91□□□□□ -0.18
NCAPD3-212ENST00000534290 PCDH11XQ9BZA7 1347 aa13.9□□□□□ -0.18
NCAPD3-212ENST00000534290 PCDH11YQ9BZA8 1340 aa13.9□□□□□ -0.18
NCAPD3-212ENST00000534290 CYP27B1O15528 508 aa13.9□□□□□ -0.18
NCAPD3-212ENST00000534290 B4GALNT3Q6L9W6 998 aa13.9□□□□□ -0.18
NCAPD3-212ENST00000534290 RGPD2P0DJD1 1756 aa13.9□□□□□ -0.18
NCAPD3-212ENST00000534290 PALLDQ8WX93 1383 aa13.89□□□□□ -0.19
NCAPD3-212ENST00000534290 SMARCC1Q92922 1105 aaPredicted RBP13.89□□□□□ -0.19
NCAPD3-212ENST00000534290 RBM19Q9Y4C8 960 aaKnown RBP13.89□□□□□ -0.19
NCAPD3-212ENST00000534290 TUBGCP6Q96RT7 1819 aa13.88□□□□□ -0.19
NCAPD3-212ENST00000534290 SHANK3Q9BYB0 1731 aa13.88□□□□□ -0.19
NCAPD3-212ENST00000534290 SLFN5Q08AF3 891 aa13.88□□□□□ -0.19
NCAPD3-212ENST00000534290 FLT4P35916 1363 aa13.87□□□□□ -0.19
NCAPD3-212ENST00000534290 NEFMP07197 916 aa13.87□□□□□ -0.19
NCAPD3-212ENST00000534290 WDR63Q8IWG1 891 aa13.87□□□□□ -0.19
NCAPD3-212ENST00000534290 PIGBQ92521 554 aa13.87□□□□□ -0.19
NCAPD3-212ENST00000534290 AK7Q96M32 723 aa13.87□□□□□ -0.19
NCAPD3-212ENST00000534290 KIF24Q5T7B8 1368 aa13.86□□□□□ -0.19
NCAPD3-212ENST00000534290 APAF1O14727 1248 aa13.86□□□□□ -0.19
NCAPD3-212ENST00000534290 PPM1GO15355 546 aaPredicted RBP13.86□□□□□ -0.19
NCAPD3-212ENST00000534290 PHF14O94880 888 aa13.86□□□□□ -0.19
NCAPD3-212ENST00000534290 NKX1-1Q15270 411 aaPredicted RBP13.86□□□□□ -0.19
NCAPD3-212ENST00000534290 CCDC27Q2M243 656 aa13.86□□□□□ -0.19
NCAPD3-212ENST00000534290 SMIM5Q71RC9 77 aa13.86□□□□□ -0.19
NCAPD3-212ENST00000534290 AMIGO3Q86WK7 504 aa13.86□□□□□ -0.19
NCAPD3-212ENST00000534290 CDCA7LQ96GN5 454 aa13.86□□□□□ -0.19
NCAPD3-212ENST00000534290 ZNF521Q96K83 1311 aa13.86□□□□□ -0.19
NCAPD3-212ENST00000534290 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.85□□□□□ -0.19
NCAPD3-212ENST00000534290 MTHFSP49914 203 aa13.85□□□□□ -0.19
NCAPD3-212ENST00000534290 AAMPQ13685 434 aa13.85□□□□□ -0.19
NCAPD3-212ENST00000534290 DUSP27Q5VZP5 1158 aa13.85□□□□□ -0.19
NCAPD3-212ENST00000534290 TRMT2AQ8IZ69 625 aaKnown RBP13.85□□□□□ -0.19
NCAPD3-212ENST00000534290 GPBP1L1Q9HC44 474 aaPredicted RBP13.85□□□□□ -0.19
NCAPD3-212ENST00000534290 SPG7Q9UQ90 795 aa13.85□□□□□ -0.19
NCAPD3-212ENST00000534290 EMILIN1Q9Y6C2 1016 aa13.85□□□□□ -0.19
NCAPD3-212ENST00000534290 ATP10DQ9P241 1426 aa13.84□□□□□ -0.19
NCAPD3-212ENST00000534290 LOC102724428A0A0B4J2F2 783 aa13.83□□□□□ -0.2
NCAPD3-212ENST00000534290 TCERG1O14776 1098 aaKnown RBP13.83□□□□□ -0.2
NCAPD3-212ENST00000534290 SIK1P57059 783 aa13.83□□□□□ -0.2
NCAPD3-212ENST00000534290 ZNF526Q8TF50 670 aaPredicted RBP13.83□□□□□ -0.2
NCAPD3-212ENST00000534290 MYH16Q9H6N6 1097 aa13.83□□□□□ -0.2
NCAPD3-212ENST00000534290 WWC3Q9ULE0 1092 aa13.83□□□□□ -0.2
NCAPD3-212ENST00000534290 ANKRD26Q9UPS8 1709 aa13.83□□□□□ -0.2
NCAPD3-212ENST00000534290 MS4A1P11836 297 aa13.82□□□□□ -0.2
NCAPD3-212ENST00000534290 SSFA2P28290 1259 aa13.82□□□□□ -0.2
NCAPD3-212ENST00000534290 CCDC146Q8IYE0 955 aa13.82□□□□□ -0.2
NCAPD3-212ENST00000534290 LINC00116Q8NCU8 138 aa13.82□□□□□ -0.2
NCAPD3-212ENST00000534290 TMOD3Q9NYL9 352 aa13.82□□□□□ -0.2
NCAPD3-212ENST00000534290 IGSF1Q8N6C5 1336 aa13.82□□□□□ -0.2
NCAPD3-212ENST00000534290 FANCIQ9NVI1 1328 aa13.82□□□□□ -0.2
NCAPD3-212ENST00000534290 C5P01031 1676 aa13.82□□□□□ -0.2
NCAPD3-212ENST00000534290 CT47B1P0C2W7 299 aaPredicted RBP13.81□□□□□ -0.2
NCAPD3-212ENST00000534290 IFFO2Q5TF58 517 aa13.81□□□□□ -0.2
NCAPD3-212ENST00000534290 EYA1Q99502 592 aa13.81□□□□□ -0.2
NCAPD3-212ENST00000534290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.81□□□□□ -0.2
NCAPD3-212ENST00000534290 ASAP1Q9ULH1 1129 aa13.81□□□□□ -0.2
NCAPD3-212ENST00000534290 GNPATO15228 680 aa13.8□□□□□ -0.2
NCAPD3-212ENST00000534290 U2AF1L5P0DN76 240 aaPredicted RBP13.8□□□□□ -0.2
NCAPD3-212ENST00000534290 ATP6V1AP38606 617 aa13.8□□□□□ -0.2
NCAPD3-212ENST00000534290 TNNT2P45379 298 aaPredicted RBP13.8□□□□□ -0.2
NCAPD3-212ENST00000534290 U2AF1Q01081 240 aaKnown RBP eCLIP13.8□□□□□ -0.2
NCAPD3-212ENST00000534290 ITPK1Q13572 414 aa13.8□□□□□ -0.2
NCAPD3-212ENST00000534290 IFNL2Q8IZJ0 200 aa13.8□□□□□ -0.2
NCAPD3-212ENST00000534290 EXOC6Q8TAG9 804 aa13.8□□□□□ -0.2
NCAPD3-212ENST00000534290 MAPK8IP3Q9UPT6 1336 aa13.8□□□□□ -0.2
NCAPD3-212ENST00000534290 C4BP0C0L5 1744 aa13.79□□□□□ -0.2
NCAPD3-212ENST00000534290 WWC1Q8IX03 1113 aa13.79□□□□□ -0.2
NCAPD3-212ENST00000534290 ATG3Q9NT62 314 aa13.79□□□□□ -0.2
NCAPD3-212ENST00000534290 DIAPH1O60610 1272 aaKnown RBP13.78□□□□□ -0.2
NCAPD3-212ENST00000534290 PHKG2P15735 406 aa13.78□□□□□ -0.2
NCAPD3-212ENST00000534290 HSPA6P17066 643 aa13.78□□□□□ -0.2
NCAPD3-212ENST00000534290 PDE3AQ14432 1141 aa13.78□□□□□ -0.2
NCAPD3-212ENST00000534290 POLKQ9UBT6 870 aa13.78□□□□□ -0.2
NCAPD3-212ENST00000534290 TAF1LQ8IZX4 1826 aa13.78□□□□□ -0.2
NCAPD3-212ENST00000534290 ADCY9O60503 1353 aa13.77□□□□□ -0.21
NCAPD3-212ENST00000534290 MMP10P09238 476 aa13.77□□□□□ -0.21
NCAPD3-212ENST00000534290 CANXP27824 592 aaKnown RBP13.77□□□□□ -0.21
NCAPD3-212ENST00000534290 CALD1Q05682 793 aaKnown RBP13.77□□□□□ -0.21
NCAPD3-212ENST00000534290 NCAPD2Q15021 1401 aa13.77□□□□□ -0.21
NCAPD3-212ENST00000534290 TRAPPC3LQ5T215 181 aa13.77□□□□□ -0.21
NCAPD3-212ENST00000534290 KIF20BQ96Q89 1820 aa13.76□□□□□ -0.21
NCAPD3-212ENST00000534290 TOGARAM1Q9Y4F4 1720 aa13.76□□□□□ -0.21
NCAPD3-212ENST00000534290 ITGB4P16144 1822 aa13.76□□□□□ -0.21
NCAPD3-212ENST00000534290 IL16Q14005 1332 aa13.75□□□□□ -0.21
NCAPD3-212ENST00000534290 FCHSD2O94868 740 aa13.75□□□□□ -0.21
NCAPD3-212ENST00000534290 EIF4A2Q14240 407 aaKnown RBP13.75□□□□□ -0.21
NCAPD3-212ENST00000534290 ERICH6Q7L0X2 663 aa13.75□□□□□ -0.21
NCAPD3-212ENST00000534290 CENPQQ7L2Z9 268 aaPredicted RBP13.75□□□□□ -0.21
NCAPD3-212ENST00000534290 NLGN1Q8N2Q7 840 aa13.75□□□□□ -0.21
NCAPD3-212ENST00000534290 RTCBQ9Y3I0 505 aaKnown RBP13.75□□□□□ -0.21
NCAPD3-212ENST00000534290 U2SURPO15042 1029 aaKnown RBP13.74□□□□□ -0.21
NCAPD3-212ENST00000534290 TGFB2P61812 414 aa13.74□□□□□ -0.21
NCAPD3-212ENST00000534290 CRBNQ96SW2 442 aa13.74□□□□□ -0.21
NCAPD3-212ENST00000534290 UBR3Q6ZT12 1888 aa13.74□□□□□ -0.21
NCAPD3-212ENST00000534290 PKD1L3Q7Z443 1732 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms