RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 KCNQ3O43525 872 aa12.13□□□□□ -0.47
RTL1-201ENST00000534062 DLG5Q8TDM6 1919 aa12.13□□□□□ -0.47
RTL1-201ENST00000534062 MS4A1P11836 297 aa12.12□□□□□ -0.47
RTL1-201ENST00000534062 CARD10Q9BWT7 1032 aa12.12□□□□□ -0.47
RTL1-201ENST00000534062 PHKG2P15735 406 aa12.12□□□□□ -0.47
RTL1-201ENST00000534062 HDGFL1Q5TGJ6 251 aa12.12□□□□□ -0.47
RTL1-201ENST00000534062 ATF7IPQ6VMQ6 1270 aa12.12□□□□□ -0.47
RTL1-201ENST00000534062 CAMTA1Q9Y6Y1 1673 aa12.12□□□□□ -0.47
RTL1-201ENST00000534062 PHRF1Q9P1Y6 1649 aaKnown RBP12.12□□□□□ -0.47
RTL1-201ENST00000534062 TRIM27P14373 513 aa12.12□□□□□ -0.47
RTL1-201ENST00000534062 RLBP1P12271 317 aa12.11□□□□□ -0.47
RTL1-201ENST00000534062 HSPA1LP34931 641 aa12.11□□□□□ -0.47
RTL1-201ENST00000534062 CYP27B1O15528 508 aa12.11□□□□□ -0.47
RTL1-201ENST00000534062 MEGF6O75095 1541 aa12.11□□□□□ -0.47
RTL1-201ENST00000534062 PDE3AQ14432 1141 aa12.11□□□□□ -0.47
RTL1-201ENST00000534062 NPM2Q86SE8 214 aaKnown RBP12.11□□□□□ -0.47
RTL1-201ENST00000534062 ARXQ96QS3 562 aa12.11□□□□□ -0.47
RTL1-201ENST00000534062 HSP90AB1P08238 724 aaKnown RBP12.1□□□□□ -0.47
RTL1-201ENST00000534062 ALDH1L2Q3SY69 923 aa12.1□□□□□ -0.47
RTL1-201ENST00000534062 RGPD1P0DJD0 1748 aa12.1□□□□□ -0.47
RTL1-201ENST00000534062 COL5A2P05997 1499 aaPredicted RBP12.1□□□□□ -0.47
RTL1-201ENST00000534062 USP54Q70EL1 1684 aa12.1□□□□□ -0.47
RTL1-201ENST00000534062 EXOC5O00471 708 aa12.1□□□□□ -0.47
RTL1-201ENST00000534062 FKBP5Q13451 457 aaPredicted RBP12.1□□□□□ -0.47
RTL1-201ENST00000534062 ZNF330Q9Y3S2 320 aaPredicted RBP12.1□□□□□ -0.47
RTL1-201ENST00000534062 PHLPP1O60346 1717 aa12.1□□□□□ -0.47
RTL1-201ENST00000534062 ANXA1P04083 346 aa12.1□□□□□ -0.47
RTL1-201ENST00000534062 CRB1P82279 1406 aa12.09□□□□□ -0.47
RTL1-201ENST00000534062 PTCD1O75127 700 aaKnown RBP12.09□□□□□ -0.47
RTL1-201ENST00000534062 CCDC30Q5VVM6 783 aa12.09□□□□□ -0.47
RTL1-201ENST00000534062 PCDH11XQ9BZA7 1347 aa12.09□□□□□ -0.47
RTL1-201ENST00000534062 PCDH11YQ9BZA8 1340 aa12.09□□□□□ -0.47
RTL1-201ENST00000534062 GLIPR1L2Q4G1C9 344 aa12.09□□□□□ -0.47
RTL1-201ENST00000534062 TMEM57Q8N5G2 664 aa12.09□□□□□ -0.47
RTL1-201ENST00000534062 ZNF428Q96B54 188 aa12.09□□□□□ -0.47
RTL1-201ENST00000534062 DCAF5Q96JK2 942 aa12.09□□□□□ -0.47
RTL1-201ENST00000534062 NHSL1Q5SYE7 1610 aa12.09□□□□□ -0.47
RTL1-201ENST00000534062 MRPL50Q8N5N7 158 aaKnown RBP12.08□□□□□ -0.47
RTL1-201ENST00000534062 SLC52A2Q9HAB3 445 aa12.08□□□□□ -0.48
RTL1-201ENST00000534062 F6X3S4 739 aa12.07□□□□□ -0.48
RTL1-201ENST00000534062 AIMP1Q12904 312 aaKnown RBP12.07□□□□□ -0.48
RTL1-201ENST00000534062 API5Q9BZZ5 524 aaKnown RBP12.07□□□□□ -0.48
RTL1-201ENST00000534062 JCADQ9P266 1359 aa12.07□□□□□ -0.48
RTL1-201ENST00000534062 FAM98CQ17RN3 349 aaKnown RBP12.07□□□□□ -0.48
RTL1-201ENST00000534062 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.07□□□□□ -0.48
RTL1-201ENST00000534062 GSE1Q14687 1217 aa12.07□□□□□ -0.48
RTL1-201ENST00000534062 MVPQ14764 893 aaKnown RBP12.07□□□□□ -0.48
RTL1-201ENST00000534062 DDB1Q16531 1140 aa12.07□□□□□ -0.48
RTL1-201ENST00000534062 G2E3Q7L622 706 aa12.06□□□□□ -0.48
RTL1-201ENST00000534062 TMOD3Q9NYL9 352 aa12.06□□□□□ -0.48
RTL1-201ENST00000534062 MYL6BP14649 208 aa12.06□□□□□ -0.48
RTL1-201ENST00000534062 PIP4K2AP48426 406 aaPredicted RBP12.06□□□□□ -0.48
RTL1-201ENST00000534062 EIF4A1P60842 406 aaKnown RBP12.06□□□□□ -0.48
RTL1-201ENST00000534062 RBM42Q9BTD8 480 aaKnown RBP12.06□□□□□ -0.48
RTL1-201ENST00000534062 C1orf115Q9H7X2 142 aa12.06□□□□□ -0.48
RTL1-201ENST00000534062 USP21Q9UK80 565 aa12.06□□□□□ -0.48
RTL1-201ENST00000534062 DDX19BQ9UMR2 479 aa12.06□□□□□ -0.48
RTL1-201ENST00000534062 PRAMEF22A3QJZ6 481 aa12.05□□□□□ -0.48
RTL1-201ENST00000534062 ZNF790Q6PG37 636 aa12.05□□□□□ -0.48
RTL1-201ENST00000534062 ACSBG1Q96GR2 724 aa12.05□□□□□ -0.48
RTL1-201ENST00000534062 AHDC1Q5TGY3 1603 aaPredicted RBP12.05□□□□□ -0.48
RTL1-201ENST00000534062 CHPF2Q9P2E5 772 aa12.05□□□□□ -0.48
RTL1-201ENST00000534062 RGS3P49796 1198 aa12.04□□□□□ -0.48
RTL1-201ENST00000534062 SKAP1Q86WV1 359 aa12.04□□□□□ -0.48
RTL1-201ENST00000534062 ZNF496Q96IT1 587 aaPredicted RBP12.04□□□□□ -0.48
RTL1-201ENST00000534062 CEMIPQ8WUJ3 1361 aa12.04□□□□□ -0.48
RTL1-201ENST00000534062 FLIIQ13045 1269 aa12.03□□□□□ -0.48
RTL1-201ENST00000534062 PHAXQ9H814 394 aaKnown RBP12.03□□□□□ -0.48
RTL1-201ENST00000534062 UNC5CLQ8IV45 518 aa12.03□□□□□ -0.48
RTL1-201ENST00000534062 FAM43AQ8N2R8 423 aa12.03□□□□□ -0.48
RTL1-201ENST00000534062 FMNL2Q96PY5 1086 aa12.03□□□□□ -0.48
RTL1-201ENST00000534062 CHMP4AQ9BY43 222 aa12.02□□□□□ -0.48
RTL1-201ENST00000534062 BABAM1Q9NWV8 329 aa12.02□□□□□ -0.49
RTL1-201ENST00000534062 OVOS2A0A0G2JMS6 1433 aa12.02□□□□□ -0.49
RTL1-201ENST00000534062 COL18A1P39060 1754 aa12.02□□□□□ -0.49
RTL1-201ENST00000534062 NCAPD2Q15021 1401 aa12.01□□□□□ -0.49
RTL1-201ENST00000534062 KDM6AO15550 1401 aaPredicted RBP12.01□□□□□ -0.49
RTL1-201ENST00000534062 GIGYF1O75420 1035 aaPredicted RBP12.01□□□□□ -0.49
RTL1-201ENST00000534062 FAM182BQ5T319 152 aa12.01□□□□□ -0.49
RTL1-201ENST00000534062 COL16A1Q07092 1604 aaPredicted RBP12□□□□□ -0.49
RTL1-201ENST00000534062 SPATA31A1Q5TZJ5 1347 aa12□□□□□ -0.49
RTL1-201ENST00000534062 PRIM1P49642 420 aaKnown RBP12□□□□□ -0.49
RTL1-201ENST00000534062 APBB1O00213 710 aa12□□□□□ -0.49
RTL1-201ENST00000534062 CHMP4BQ9H444 224 aaKnown RBP12□□□□□ -0.49
RTL1-201ENST00000534062 DBF4Q9UBU7 674 aaPredicted RBP12□□□□□ -0.49
RTL1-201ENST00000534062 SNRPA1P09661 255 aaKnown RBP12□□□□□ -0.49
RTL1-201ENST00000534062 RWDD1Q9H446 243 aaPredicted RBP12□□□□□ -0.49
RTL1-201ENST00000534062 PCDHB15Q9Y5E8 787 aa12□□□□□ -0.49
RTL1-201ENST00000534062 ARHGAP45Q92619 1136 aa11.99□□□□□ -0.49
RTL1-201ENST00000534062 USP16Q9Y5T5 823 aa11.99□□□□□ -0.49
RTL1-201ENST00000534062 PTPRCP08575 1304 aa11.99□□□□□ -0.49
RTL1-201ENST00000534062 AFF2P51816 1311 aa11.99□□□□□ -0.49
RTL1-201ENST00000534062 SPATA31A6Q5VVP1 1343 aa11.99□□□□□ -0.49
RTL1-201ENST00000534062 ERVV-2B6SEH9 535 aa11.99□□□□□ -0.49
RTL1-201ENST00000534062 PROSER3Q2NL68 480 aa11.99□□□□□ -0.49
RTL1-201ENST00000534062 CENPQQ7L2Z9 268 aaPredicted RBP11.99□□□□□ -0.49
RTL1-201ENST00000534062 RIC3Q7Z5B4 369 aa11.99□□□□□ -0.49
RTL1-201ENST00000534062 UPF2Q9HAU5 1272 aaKnown RBP11.99□□□□□ -0.49
RTL1-201ENST00000534062 ASAP1Q9ULH1 1129 aa11.99□□□□□ -0.49
RTL1-201ENST00000534062 CRYBG1Q9Y4K1 1723 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms