RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 KIF24Q5T7B8 1368 aa12.9□□□□□ -0.34
PACS1-214ENST00000533811 WDR90Q96KV7 1748 aa12.9□□□□□ -0.34
PACS1-214ENST00000533811 FCHSD2O94868 740 aa12.89□□□□□ -0.35
PACS1-214ENST00000533811 NKX1-1Q15270 411 aaPredicted RBP12.88□□□□□ -0.35
PACS1-214ENST00000533811 C16orf71Q8IYS4 520 aaPredicted RBP12.88□□□□□ -0.35
PACS1-214ENST00000533811 RBM42Q9BTD8 480 aaKnown RBP12.88□□□□□ -0.35
PACS1-214ENST00000533811 CCDC87Q9NVE4 849 aa12.88□□□□□ -0.35
PACS1-214ENST00000533811 RTCBQ9Y3I0 505 aaKnown RBP12.88□□□□□ -0.35
PACS1-214ENST00000533811 DPEP1P16444 411 aa12.87□□□□□ -0.35
PACS1-214ENST00000533811 TGFB2P61812 414 aa12.87□□□□□ -0.35
PACS1-214ENST00000533811 TRAPPC3LQ5T215 181 aa12.87□□□□□ -0.35
PACS1-214ENST00000533811 IFNL2Q8IZJ0 200 aa12.87□□□□□ -0.35
PACS1-214ENST00000533811 C4AP0C0L4 1744 aa12.87□□□□□ -0.35
PACS1-214ENST00000533811 C10orf71Q711Q0 1435 aa12.87□□□□□ -0.35
PACS1-214ENST00000533811 BRCA1P38398 1863 aaKnown RBP12.87□□□□□ -0.35
PACS1-214ENST00000533811 CAPN15O75808 1086 aa12.86□□□□□ -0.35
PACS1-214ENST00000533811 PHKG2P15735 406 aa12.86□□□□□ -0.35
PACS1-214ENST00000533811 HTRA3P83110 453 aa12.86□□□□□ -0.35
PACS1-214ENST00000533811 C9orf131Q5VYM1 1079 aa12.86□□□□□ -0.35
PACS1-214ENST00000533811 DNAJC5GQ8N7S2 189 aa12.86□□□□□ -0.35
PACS1-214ENST00000533811 EYA1Q99502 592 aa12.86□□□□□ -0.35
PACS1-214ENST00000533811 ATG3Q9NT62 314 aa12.86□□□□□ -0.35
PACS1-214ENST00000533811 PARP3Q9Y6F1 533 aa12.86□□□□□ -0.35
PACS1-214ENST00000533811 NCAPD2Q15021 1401 aa12.86□□□□□ -0.35
PACS1-214ENST00000533811 ANKRD26Q9UPS8 1709 aa12.85□□□□□ -0.35
PACS1-214ENST00000533811 RFC4P35249 363 aa12.85□□□□□ -0.35
PACS1-214ENST00000533811 NLGN1Q8N2Q7 840 aa12.85□□□□□ -0.35
PACS1-214ENST00000533811 ARFGEF1Q9Y6D6 1849 aa12.85□□□□□ -0.35
PACS1-214ENST00000533811 ARHGEF1Q92888 912 aaKnown RBP12.84□□□□□ -0.35
PACS1-214ENST00000533811 COL5A3P25940 1745 aaPredicted RBP12.84□□□□□ -0.35
PACS1-214ENST00000533811 KDRP35968 1356 aa12.83□□□□□ -0.36
PACS1-214ENST00000533811 CDCA8Q53HL2 280 aa12.83□□□□□ -0.36
PACS1-214ENST00000533811 RBM46Q8TBY0 533 aaKnown RBP12.83□□□□□ -0.36
PACS1-214ENST00000533811 CARD14Q9BXL6 1004 aa12.83□□□□□ -0.36
PACS1-214ENST00000533811 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.36
PACS1-214ENST00000533811 MYH14Q7Z406 1995 aaKnown RBP12.83□□□□□ -0.36
PACS1-214ENST00000533811 WASHC2AQ641Q2 1341 aa12.83□□□□□ -0.36
PACS1-214ENST00000533811 KCPQ6ZWJ8 1503 aa12.83□□□□□ -0.36
PACS1-214ENST00000533811 PLEKHG2Q9H7P9 1386 aa12.82□□□□□ -0.36
PACS1-214ENST00000533811 GYS1P13807 737 aa12.82□□□□□ -0.36
PACS1-214ENST00000533811 TNNT2P45379 298 aaPredicted RBP12.82□□□□□ -0.36
PACS1-214ENST00000533811 KLRG1Q96E93 195 aa12.82□□□□□ -0.36
PACS1-214ENST00000533811 SLC4A9Q96Q91 983 aa12.82□□□□□ -0.36
PACS1-214ENST00000533811 RNF181Q9P0P0 153 aa12.82□□□□□ -0.36
PACS1-214ENST00000533811 ADRA2BP18089 450 aa12.81□□□□□ -0.36
PACS1-214ENST00000533811 COL13A1Q5TAT6 717 aaPredicted RBP12.81□□□□□ -0.36
PACS1-214ENST00000533811 POLR3GLQ9BT43 218 aa12.81□□□□□ -0.36
PACS1-214ENST00000533811 PIM2Q9P1W9 311 aa12.81□□□□□ -0.36
PACS1-214ENST00000533811 KDM2BQ8NHM5 1336 aa12.81□□□□□ -0.36
PACS1-214ENST00000533811 RPS6KA4O75676 772 aa12.8□□□□□ -0.36
PACS1-214ENST00000533811 CABP4P57796 275 aa12.8□□□□□ -0.36
PACS1-214ENST00000533811 EIF4A2Q14240 407 aaKnown RBP12.8□□□□□ -0.36
PACS1-214ENST00000533811 DALRD3Q5D0E6 543 aaKnown RBP12.8□□□□□ -0.36
PACS1-214ENST00000533811 RC3H1Q5TC82 1133 aaKnown RBP12.8□□□□□ -0.36
PACS1-214ENST00000533811 RRAGCQ9HB90 399 aa12.8□□□□□ -0.36
PACS1-214ENST00000533811 SRP68Q9UHB9 627 aaKnown RBP12.8□□□□□ -0.36
PACS1-214ENST00000533811 CNTNAP4Q9C0A0 1308 aa12.8□□□□□ -0.36
PACS1-214ENST00000533811 ZNF831Q5JPB2 1677 aa12.8□□□□□ -0.36
PACS1-214ENST00000533811 SBF1O95248 1867 aa12.79□□□□□ -0.36
PACS1-214ENST00000533811 ERVV-2B6SEH9 535 aa12.79□□□□□ -0.36
PACS1-214ENST00000533811 PTCD1O75127 700 aaKnown RBP12.79□□□□□ -0.36
PACS1-214ENST00000533811 FSTL1Q12841 308 aa12.79□□□□□ -0.36
PACS1-214ENST00000533811 POLKQ9UBT6 870 aa12.79□□□□□ -0.36
PACS1-214ENST00000533811 TNRC6CQ9HCJ0 1690 aaKnown RBP12.79□□□□□ -0.36
PACS1-214ENST00000533811 HSP90AB1P08238 724 aaKnown RBP12.78□□□□□ -0.36
PACS1-214ENST00000533811 KCNA3P22001 575 aa12.78□□□□□ -0.36
PACS1-214ENST00000533811 CHRNA5P30532 468 aa12.78□□□□□ -0.36
PACS1-214ENST00000533811 ZNF530Q6P9A1 599 aaPredicted RBP12.78□□□□□ -0.36
PACS1-214ENST00000533811 TNS4Q8IZW8 715 aa12.78□□□□□ -0.36
PACS1-214ENST00000533811 DCAF5Q96JK2 942 aa12.78□□□□□ -0.36
PACS1-214ENST00000533811 CRKLP46109 303 aaKnown RBP12.77□□□□□ -0.37
PACS1-214ENST00000533811 FKBP8Q14318 412 aa12.77□□□□□ -0.37
PACS1-214ENST00000533811 PLEKHO1Q53GL0 409 aaPredicted RBP12.77□□□□□ -0.37
PACS1-214ENST00000533811 DDR1Q08345 913 aa12.76□□□□□ -0.37
PACS1-214ENST00000533811 JMYQ8N9B5 988 aa12.76□□□□□ -0.37
PACS1-214ENST00000533811 KDM6AO15550 1401 aaPredicted RBP12.76□□□□□ -0.37
PACS1-214ENST00000533811 CCDC88AQ3V6T2 1871 aa12.76□□□□□ -0.37
PACS1-214ENST00000533811 MTHFSP49914 203 aa12.75□□□□□ -0.37
PACS1-214ENST00000533811 RASSF7Q02833 373 aa12.75□□□□□ -0.37
PACS1-214ENST00000533811 TJP1Q07157 1748 aa12.75□□□□□ -0.37
PACS1-214ENST00000533811 SMC1BQ8NDV3 1235 aa12.75□□□□□ -0.37
PACS1-214ENST00000533811 USP42Q9H9J4 1324 aaKnown RBP12.74□□□□□ -0.37
PACS1-214ENST00000533811 C1orf141Q5JVX7 400 aa12.74□□□□□ -0.37
PACS1-214ENST00000533811 AFDNP55196 1824 aaKnown RBP12.74□□□□□ -0.37
PACS1-214ENST00000533811 TIAM2Q8IVF5 1701 aa12.72□□□□□ -0.37
PACS1-214ENST00000533811 POLRMTO00411 1230 aaKnown RBP12.72□□□□□ -0.37
PACS1-214ENST00000533811 ZPR1O75312 459 aa12.72□□□□□ -0.37
PACS1-214ENST00000533811 AMOTQ4VCS5 1084 aa12.72□□□□□ -0.37
PACS1-214ENST00000533811 AEBP1Q8IUX7 1158 aa12.72□□□□□ -0.37
PACS1-214ENST00000533811 NFATC2IPQ8NCF5 419 aa12.72□□□□□ -0.37
PACS1-214ENST00000533811 HSPA1AP0DMV8 641 aaKnown RBP12.71□□□□□ -0.37
PACS1-214ENST00000533811 HSPA1BP0DMV9 641 aaKnown RBP12.71□□□□□ -0.37
PACS1-214ENST00000533811 USPL1Q5W0Q7 1092 aa12.71□□□□□ -0.37
PACS1-214ENST00000533811 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.38
PACS1-214ENST00000533811 PRELPP51888 382 aa12.7□□□□□ -0.38
PACS1-214ENST00000533811 DNAJC10Q8IXB1 793 aa12.7□□□□□ -0.38
PACS1-214ENST00000533811 ADAMTS7Q9UKP4 1686 aa12.7□□□□□ -0.38
PACS1-214ENST00000533811 VIRMAQ69YN4 1812 aaKnown RBP12.69□□□□□ -0.38
PACS1-214ENST00000533811 VEGFAP15692 232 aaPredicted RBP12.69□□□□□ -0.38
PACS1-214ENST00000533811 LMNB1P20700 586 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms