RNA–Protein interactions for RNA: ENST00000533787.1

CCDC84-207, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 1,140 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-207ENST00000533787 PHKG2P15735 406 aa16.53■□□□□ 0.24
CCDC84-207ENST00000533787 ATP6V1AP38606 617 aa16.53■□□□□ 0.24
CCDC84-207ENST00000533787 IFNL2Q8IZJ0 200 aa16.53■□□□□ 0.24
CCDC84-207ENST00000533787 ATG3Q9NT62 314 aa16.52■□□□□ 0.24
CCDC84-207ENST00000533787 KIAA1551Q9HCM1 1747 aa16.52■□□□□ 0.24
CCDC84-207ENST00000533787 N4BP2Q86UW6 1770 aaPredicted RBP16.51■□□□□ 0.23
CCDC84-207ENST00000533787 KIF3CO14782 793 aa16.51■□□□□ 0.23
CCDC84-207ENST00000533787 MMP10P09238 476 aa16.51■□□□□ 0.23
CCDC84-207ENST00000533787 PXDNLA1KZ92 1463 aa16.5■□□□□ 0.23
CCDC84-207ENST00000533787 POLKQ9UBT6 870 aa16.5■□□□□ 0.23
CCDC84-207ENST00000533787 ZNF831Q5JPB2 1677 aa16.49■□□□□ 0.23
CCDC84-207ENST00000533787 KDRP35968 1356 aa16.49■□□□□ 0.23
CCDC84-207ENST00000533787 COL5A3P25940 1745 aaPredicted RBP16.48■□□□□ 0.23
CCDC84-207ENST00000533787 TGFB2P61812 414 aa16.47■□□□□ 0.23
CCDC84-207ENST00000533787 EIF4A2Q14240 407 aaKnown RBP16.47■□□□□ 0.23
CCDC84-207ENST00000533787 TRAPPC3LQ5T215 181 aa16.47■□□□□ 0.23
CCDC84-207ENST00000533787 SLC4A9Q96Q91 983 aa16.47■□□□□ 0.23
CCDC84-207ENST00000533787 RTCBQ9Y3I0 505 aaKnown RBP16.47■□□□□ 0.23
CCDC84-207ENST00000533787 C10orf71Q711Q0 1435 aa16.46■□□□□ 0.23
CCDC84-207ENST00000533787 A0A0G2JLW4 131 aa16.46■□□□□ 0.23
CCDC84-207ENST00000533787 NLGN1Q8N2Q7 840 aa16.46■□□□□ 0.23
CCDC84-207ENST00000533787 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.23
CCDC84-207ENST00000533787 BCS1LQ9Y276 419 aa16.46■□□□□ 0.23
CCDC84-207ENST00000533787 PLEKHG2Q9H7P9 1386 aa16.46■□□□□ 0.23
CCDC84-207ENST00000533787 BRCA1P38398 1863 aaKnown RBP16.46■□□□□ 0.22
CCDC84-207ENST00000533787 C4AP0C0L4 1744 aa16.45■□□□□ 0.22
CCDC84-207ENST00000533787 TNNT2P45379 298 aaPredicted RBP16.45■□□□□ 0.22
CCDC84-207ENST00000533787 ARHGEF1Q92888 912 aaKnown RBP16.45■□□□□ 0.22
CCDC84-207ENST00000533787 MYH14Q7Z406 1995 aaKnown RBP16.45■□□□□ 0.22
CCDC84-207ENST00000533787 ERVV-2B6SEH9 535 aa16.44■□□□□ 0.22
CCDC84-207ENST00000533787 RC3H1Q5TC82 1133 aaKnown RBP16.44■□□□□ 0.22
CCDC84-207ENST00000533787 CNTNAP4Q9C0A0 1308 aa16.44■□□□□ 0.22
CCDC84-207ENST00000533787 GYS1P13807 737 aa16.43■□□□□ 0.22
CCDC84-207ENST00000533787 ARHGAP27Q6ZUM4 889 aa16.43■□□□□ 0.22
CCDC84-207ENST00000533787 DCAF5Q96JK2 942 aa16.43■□□□□ 0.22
CCDC84-207ENST00000533787 CCDC87Q9NVE4 849 aa16.43■□□□□ 0.22
CCDC84-207ENST00000533787 TOMM70O94826 608 aa16.42■□□□□ 0.22
CCDC84-207ENST00000533787 HSP90AB1P08238 724 aaKnown RBP16.42■□□□□ 0.22
CCDC84-207ENST00000533787 DPEP1P16444 411 aa16.42■□□□□ 0.22
CCDC84-207ENST00000533787 RFC4P35249 363 aa16.42■□□□□ 0.22
CCDC84-207ENST00000533787 APLP1P51693 650 aa16.42■□□□□ 0.22
CCDC84-207ENST00000533787 ARFGEF1Q9Y6D6 1849 aa16.41■□□□□ 0.22
CCDC84-207ENST00000533787 RPS6KA4O75676 772 aa16.41■□□□□ 0.22
CCDC84-207ENST00000533787 PARP3Q9Y6F1 533 aa16.41■□□□□ 0.22
CCDC84-207ENST00000533787 KDM6AO15550 1401 aaPredicted RBP16.41■□□□□ 0.22
CCDC84-207ENST00000533787 FCHSD2O94868 740 aa16.4■□□□□ 0.22
CCDC84-207ENST00000533787 CABP4P57796 275 aa16.4■□□□□ 0.22
CCDC84-207ENST00000533787 PLEKHO1Q53GL0 409 aaPredicted RBP16.4■□□□□ 0.22
CCDC84-207ENST00000533787 POLR3GLQ9BT43 218 aa16.4■□□□□ 0.22
CCDC84-207ENST00000533787 NMRK2Q9NPI5 230 aa16.4■□□□□ 0.22
CCDC84-207ENST00000533787 KCNA3P22001 575 aa16.39■□□□□ 0.21
CCDC84-207ENST00000533787 ZNF530Q6P9A1 599 aaPredicted RBP16.39■□□□□ 0.21
CCDC84-207ENST00000533787 PTCD1O75127 700 aaKnown RBP16.37■□□□□ 0.21
CCDC84-207ENST00000533787 AMOTQ4VCS5 1084 aa16.37■□□□□ 0.21
CCDC84-207ENST00000533787 C9orf131Q5VYM1 1079 aa16.37■□□□□ 0.21
CCDC84-207ENST00000533787 DNAJC5GQ8N7S2 189 aa16.37■□□□□ 0.21
CCDC84-207ENST00000533787 TJP1Q07157 1748 aa16.36■□□□□ 0.21
CCDC84-207ENST00000533787 CRKLP46109 303 aaKnown RBP16.36■□□□□ 0.21
CCDC84-207ENST00000533787 MTHFSP49914 203 aa16.36■□□□□ 0.21
CCDC84-207ENST00000533787 PIM2Q9P1W9 311 aa16.36■□□□□ 0.21
CCDC84-207ENST00000533787 SRP68Q9UHB9 627 aaKnown RBP16.36■□□□□ 0.21
CCDC84-207ENST00000533787 WDR90Q96KV7 1748 aa16.36■□□□□ 0.21
CCDC84-207ENST00000533787 FKBP8Q14318 412 aa16.35■□□□□ 0.21
CCDC84-207ENST00000533787 C1orf141Q5JVX7 400 aa16.35■□□□□ 0.21
CCDC84-207ENST00000533787 AEBP1Q8IUX7 1158 aa16.35■□□□□ 0.21
CCDC84-207ENST00000533787 NFATC2IPQ8NCF5 419 aa16.35■□□□□ 0.21
CCDC84-207ENST00000533787 TIMELESSQ9UNS1 1208 aa16.35■□□□□ 0.21
CCDC84-207ENST00000533787 USP42Q9H9J4 1324 aaKnown RBP16.35■□□□□ 0.21
CCDC84-207ENST00000533787 DDR1Q08345 913 aa16.34■□□□□ 0.21
CCDC84-207ENST00000533787 RBM46Q8TBY0 533 aaKnown RBP16.34■□□□□ 0.21
CCDC84-207ENST00000533787 SCN11AQ9UI33 1791 aa16.33■□□□□ 0.21
CCDC84-207ENST00000533787 SBF1O95248 1867 aa16.33■□□□□ 0.21
CCDC84-207ENST00000533787 DALRD3Q5D0E6 543 aaKnown RBP16.33■□□□□ 0.2
CCDC84-207ENST00000533787 PANK3Q9H999 370 aa16.33■□□□□ 0.2
CCDC84-207ENST00000533787 KCPQ6ZWJ8 1503 aa16.33■□□□□ 0.2
CCDC84-207ENST00000533787 ADAMTS7Q9UKP4 1686 aa16.33■□□□□ 0.2
CCDC84-207ENST00000533787 TRIM26Q12899 539 aaPredicted RBP16.32■□□□□ 0.2
CCDC84-207ENST00000533787 C16orf71Q8IYS4 520 aaPredicted RBP16.32■□□□□ 0.2
CCDC84-207ENST00000533787 CHRNA5P30532 468 aa16.31■□□□□ 0.2
CCDC84-207ENST00000533787 SULT6B1Q6IMI4 303 aa16.31■□□□□ 0.2
CCDC84-207ENST00000533787 INTS5Q6P9B9 1019 aaKnown RBP16.31■□□□□ 0.2
CCDC84-207ENST00000533787 RNF181Q9P0P0 153 aa16.31■□□□□ 0.2
CCDC84-207ENST00000533787 KDM2BQ8NHM5 1336 aa16.3■□□□□ 0.2
CCDC84-207ENST00000533787 POLRMTO00411 1230 aaKnown RBP16.3■□□□□ 0.2
CCDC84-207ENST00000533787 TNRC6CQ9HCJ0 1690 aaKnown RBP16.3■□□□□ 0.2
CCDC84-207ENST00000533787 TM4SF1P30408 202 aa16.29■□□□□ 0.2
CCDC84-207ENST00000533787 HTRA3P83110 453 aa16.29■□□□□ 0.2
CCDC84-207ENST00000533787 FSTL1Q12841 308 aa16.29■□□□□ 0.2
CCDC84-207ENST00000533787 MORC1Q86VD1 984 aa16.29■□□□□ 0.2
CCDC84-207ENST00000533787 AFDNP55196 1824 aaKnown RBP16.29■□□□□ 0.2
CCDC84-207ENST00000533787 VIRMAQ69YN4 1812 aaKnown RBP16.29■□□□□ 0.2
CCDC84-207ENST00000533787 USPL1Q5W0Q7 1092 aa16.28■□□□□ 0.2
CCDC84-207ENST00000533787 RRAGCQ9HB90 399 aa16.28■□□□□ 0.2
CCDC84-207ENST00000533787 ZPR1O75312 459 aa16.27■□□□□ 0.2
CCDC84-207ENST00000533787 HSPA5P11021 654 aaKnown RBP16.27■□□□□ 0.2
CCDC84-207ENST00000533787 IL13P35225 146 aa16.27■□□□□ 0.2
CCDC84-207ENST00000533787 EIF4G2P78344 907 aaKnown RBP eCLIP16.27■□□□□ 0.2
CCDC84-207ENST00000533787 AKAP4Q5JQC9 854 aa16.27■□□□□ 0.2
CCDC84-207ENST00000533787 DNAJC10Q8IXB1 793 aa16.27■□□□□ 0.2
CCDC84-207ENST00000533787 KLRG1Q96E93 195 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms