RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 CHADLQ6NUI6 762 aa13.07□□□□□ -0.32
PACS1-213ENST00000533756 CENPJQ9HC77 1338 aaPredicted RBP13.07□□□□□ -0.32
PACS1-213ENST00000533756 USP31Q70CQ4 1352 aa13.07□□□□□ -0.32
PACS1-213ENST00000533756 POTECB2RU33 542 aa13.06□□□□□ -0.32
PACS1-213ENST00000533756 MAP2K1Q02750 393 aaPredicted RBP13.06□□□□□ -0.32
PACS1-213ENST00000533756 SBF1O95248 1867 aa13.06□□□□□ -0.32
PACS1-213ENST00000533756 KDM6AO15550 1401 aaPredicted RBP13.05□□□□□ -0.32
PACS1-213ENST00000533756 TMF1P82094 1093 aa13.05□□□□□ -0.32
PACS1-213ENST00000533756 TNRC18O15417 2968 aaPredicted RBP13.05□□□□□ -0.32
PACS1-213ENST00000533756 MYCNP04198 464 aaPredicted RBP13.04□□□□□ -0.32
PACS1-213ENST00000533756 LMNB1P20700 586 aa13.04□□□□□ -0.32
PACS1-213ENST00000533756 DPY19L2Q6NUT2 758 aa13.04□□□□□ -0.32
PACS1-213ENST00000533756 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
PACS1-213ENST00000533756 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
PACS1-213ENST00000533756 IP6K1Q92551 441 aa13.04□□□□□ -0.32
PACS1-213ENST00000533756 CGNL1Q0VF96 1302 aa13.04□□□□□ -0.32
PACS1-213ENST00000533756 GNPATO15228 680 aa13.03□□□□□ -0.32
PACS1-213ENST00000533756 PPARGC1BQ86YN6 1023 aaKnown RBP13.03□□□□□ -0.32
PACS1-213ENST00000533756 CFAP44Q96MT7 982 aa13.03□□□□□ -0.32
PACS1-213ENST00000533756 PARP3Q9Y6F1 533 aa13.03□□□□□ -0.32
PACS1-213ENST00000533756 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.32
PACS1-213ENST00000533756 LTN1O94822 1766 aa13.02□□□□□ -0.32
PACS1-213ENST00000533756 PRPF38BQ5VTL8 546 aaKnown RBP13.02□□□□□ -0.33
PACS1-213ENST00000533756 LINC00116Q8NCU8 138 aa13.02□□□□□ -0.33
PACS1-213ENST00000533756 FOXD4L1Q9NU39 408 aa13.02□□□□□ -0.33
PACS1-213ENST00000533756 PASKQ96RG2 1323 aa13.02□□□□□ -0.33
PACS1-213ENST00000533756 KTN1Q86UP2 1357 aaKnown RBP13.02□□□□□ -0.33
PACS1-213ENST00000533756 VIRMAQ69YN4 1812 aaKnown RBP13.02□□□□□ -0.33
PACS1-213ENST00000533756 TMEM88BA6NKF7 163 aa13.01□□□□□ -0.33
PACS1-213ENST00000533756 TRAPPC3LQ5T215 181 aa13.01□□□□□ -0.33
PACS1-213ENST00000533756 LTV1Q96GA3 475 aaPredicted RBP13.01□□□□□ -0.33
PACS1-213ENST00000533756 C4AP0C0L4 1744 aa13.01□□□□□ -0.33
PACS1-213ENST00000533756 EVC2Q86UK5 1308 aa13□□□□□ -0.33
PACS1-213ENST00000533756 LOC102724428A0A0B4J2F2 783 aa13□□□□□ -0.33
PACS1-213ENST00000533756 DSG3P32926 999 aa13□□□□□ -0.33
PACS1-213ENST00000533756 SIK1P57059 783 aa13□□□□□ -0.33
PACS1-213ENST00000533756 MEGF6O75095 1541 aa12.99□□□□□ -0.33
PACS1-213ENST00000533756 RASSF7Q02833 373 aa12.99□□□□□ -0.33
PACS1-213ENST00000533756 DEFB115Q30KQ5 88 aa12.99□□□□□ -0.33
PACS1-213ENST00000533756 RASSF10A6NK89 507 aa12.98□□□□□ -0.33
PACS1-213ENST00000533756 GYS1P13807 737 aa12.98□□□□□ -0.33
PACS1-213ENST00000533756 RTCBQ9Y3I0 505 aaKnown RBP12.98□□□□□ -0.33
PACS1-213ENST00000533756 NME9Q86XW9 330 aa12.97□□□□□ -0.33
PACS1-213ENST00000533756 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.97□□□□□ -0.33
PACS1-213ENST00000533756 BEGAINQ9BUH8 593 aa12.97□□□□□ -0.33
PACS1-213ENST00000533756 PCDH11XQ9BZA7 1347 aa12.96□□□□□ -0.33
PACS1-213ENST00000533756 PCDH11YQ9BZA8 1340 aa12.96□□□□□ -0.33
PACS1-213ENST00000533756 WDR33Q9C0J8 1336 aaKnown RBP12.96□□□□□ -0.33
PACS1-213ENST00000533756 NBPF1Q3BBV0 1214 aa12.96□□□□□ -0.33
PACS1-213ENST00000533756 PIGBQ92521 554 aa12.96□□□□□ -0.33
PACS1-213ENST00000533756 ARHGEF1Q92888 912 aaKnown RBP12.96□□□□□ -0.33
PACS1-213ENST00000533756 MCOLN1Q9GZU1 580 aa12.96□□□□□ -0.33
PACS1-213ENST00000533756 ZNF219Q9P2Y4 722 aaPredicted RBP12.96□□□□□ -0.33
PACS1-213ENST00000533756 PDE4DIPQ5VU43 2346 aa12.95□□□□□ -0.34
PACS1-213ENST00000533756 POTEIP0CG38 1075 aa12.95□□□□□ -0.34
PACS1-213ENST00000533756 POTEJP0CG39 1038 aa12.95□□□□□ -0.34
PACS1-213ENST00000533756 CHRNA5P30532 468 aa12.95□□□□□ -0.34
PACS1-213ENST00000533756 ATP6V1AP38606 617 aa12.95□□□□□ -0.34
PACS1-213ENST00000533756 ITPK1Q13572 414 aa12.95□□□□□ -0.34
PACS1-213ENST00000533756 LDHDQ86WU2 507 aa12.95□□□□□ -0.34
PACS1-213ENST00000533756 RAPGEF4Q8WZA2 1011 aa12.95□□□□□ -0.34
PACS1-213ENST00000533756 MAP2P11137 1827 aaKnown RBP12.95□□□□□ -0.34
PACS1-213ENST00000533756 CD163L1Q9NR16 1453 aa12.94□□□□□ -0.34
PACS1-213ENST00000533756 ITGBL1O95965 494 aaPredicted RBP12.94□□□□□ -0.34
PACS1-213ENST00000533756 RFC4P35249 363 aa12.94□□□□□ -0.34
PACS1-213ENST00000533756 TATP17735 454 aaPredicted RBP12.93□□□□□ -0.34
PACS1-213ENST00000533756 HOXC9P31274 260 aa12.92□□□□□ -0.34
PACS1-213ENST00000533756 RC3H1Q5TC82 1133 aaKnown RBP12.92□□□□□ -0.34
PACS1-213ENST00000533756 TIAM2Q8IVF5 1701 aa12.92□□□□□ -0.34
PACS1-213ENST00000533756 MAP3K19Q56UN5 1328 aa12.91□□□□□ -0.34
PACS1-213ENST00000533756 MON2Q7Z3U7 1717 aa12.91□□□□□ -0.34
PACS1-213ENST00000533756 IQCA1LA6NCM1 817 aa12.91□□□□□ -0.34
PACS1-213ENST00000533756 CYP27B1O15528 508 aa12.91□□□□□ -0.34
PACS1-213ENST00000533756 NBPF6Q5VWK0 638 aa12.91□□□□□ -0.34
PACS1-213ENST00000533756 GCC1Q96CN9 775 aa12.91□□□□□ -0.34
PACS1-213ENST00000533756 NBPF4Q96M43 638 aa12.91□□□□□ -0.34
PACS1-213ENST00000533756 SBNO2Q9Y2G9 1366 aa12.91□□□□□ -0.34
PACS1-213ENST00000533756 NFKBIEO00221 500 aa12.9□□□□□ -0.34
PACS1-213ENST00000533756 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
PACS1-213ENST00000533756 ITGB4P16144 1822 aa12.9□□□□□ -0.34
PACS1-213ENST00000533756 RPS6KA4O75676 772 aa12.89□□□□□ -0.35
PACS1-213ENST00000533756 ECE1P42892 770 aa12.89□□□□□ -0.35
PACS1-213ENST00000533756 AMPHP49418 695 aa12.89□□□□□ -0.35
PACS1-213ENST00000533756 ERFEQ4G0M1 354 aa12.89□□□□□ -0.35
PACS1-213ENST00000533756 SMG6Q86US8 1419 aaKnown RBP12.88□□□□□ -0.35
PACS1-213ENST00000533756 ZBTB22O15209 634 aa12.88□□□□□ -0.35
PACS1-213ENST00000533756 CA12O43570 354 aa12.88□□□□□ -0.35
PACS1-213ENST00000533756 DDNO94850 711 aaPredicted RBP12.88□□□□□ -0.35
PACS1-213ENST00000533756 DDR1Q08345 913 aa12.88□□□□□ -0.35
PACS1-213ENST00000533756 DGKZQ13574 1117 aa12.88□□□□□ -0.35
PACS1-213ENST00000533756 TTLL6Q8N841 843 aa12.88□□□□□ -0.35
PACS1-213ENST00000533756 ASAP1Q9ULH1 1129 aa12.88□□□□□ -0.35
PACS1-213ENST00000533756 USHBP1Q8N6Y0 703 aa12.87□□□□□ -0.35
PACS1-213ENST00000533756 GPR101Q96P66 508 aaPredicted RBP12.87□□□□□ -0.35
PACS1-213ENST00000533756 TAF1DQ9H5J8 278 aaPredicted RBP12.87□□□□□ -0.35
PACS1-213ENST00000533756 TMOD3Q9NYL9 352 aa12.87□□□□□ -0.35
PACS1-213ENST00000533756 ABT1Q9ULW3 272 aaKnown RBP12.87□□□□□ -0.35
PACS1-213ENST00000533756 CNTNAP4Q9C0A0 1308 aa12.87□□□□□ -0.35
PACS1-213ENST00000533756 RGPD2P0DJD1 1756 aa12.86□□□□□ -0.35
PACS1-213ENST00000533756 L3MBTL3Q96JM7 780 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms