RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 SLC52A2Q9HAB3 445 aa20.62■□□□□ 0.89
TRIM3-213ENST00000533309 ATRNO75882 1429 aa20.62■□□□□ 0.89
TRIM3-213ENST00000533309 VAMP4O75379 141 aa20.61■□□□□ 0.89
TRIM3-213ENST00000533309 ITGB4P16144 1822 aa20.61■□□□□ 0.89
TRIM3-213ENST00000533309 TWISTNBQ3B726 338 aaPredicted RBP20.6■□□□□ 0.89
TRIM3-213ENST00000533309 ELL2O00472 640 aaPredicted RBP20.6■□□□□ 0.89
TRIM3-213ENST00000533309 PAPPAQ13219 1627 aa20.59■□□□□ 0.89
TRIM3-213ENST00000533309 BTBD11A6QL63 1104 aa20.59■□□□□ 0.89
TRIM3-213ENST00000533309 EXOC5O00471 708 aa20.59■□□□□ 0.89
TRIM3-213ENST00000533309 IRX6P78412 446 aaPredicted RBP20.59■□□□□ 0.89
TRIM3-213ENST00000533309 DOT1LQ8TEK3 1739 aa20.58■□□□□ 0.89
TRIM3-213ENST00000533309 KCNQ3O43525 872 aa20.58■□□□□ 0.89
TRIM3-213ENST00000533309 PLIN1O60240 522 aa20.58■□□□□ 0.89
TRIM3-213ENST00000533309 NEFLP07196 543 aa20.58■□□□□ 0.89
TRIM3-213ENST00000533309 DDB1Q16531 1140 aa20.58■□□□□ 0.89
TRIM3-213ENST00000533309 FAM98CQ17RN3 349 aaKnown RBP20.58■□□□□ 0.89
TRIM3-213ENST00000533309 NFATC2IPQ8NCF5 419 aa20.58■□□□□ 0.89
TRIM3-213ENST00000533309 SSH1Q8WYL5 1049 aa20.58■□□□□ 0.89
TRIM3-213ENST00000533309 ZNF428Q96B54 188 aa20.58■□□□□ 0.89
TRIM3-213ENST00000533309 BCL2L13Q9BXK5 485 aa20.58■□□□□ 0.89
TRIM3-213ENST00000533309 UBR2Q8IWV8 1755 aa20.57■□□□□ 0.88
TRIM3-213ENST00000533309 KAT6BQ8WYB5 2073 aa20.57■□□□□ 0.88
TRIM3-213ENST00000533309 ERVV-2B6SEH9 535 aa20.56■□□□□ 0.88
TRIM3-213ENST00000533309 EIF4A1P60842 406 aaKnown RBP20.56■□□□□ 0.88
TRIM3-213ENST00000533309 FKBP8Q14318 412 aa20.56■□□□□ 0.88
TRIM3-213ENST00000533309 ALDH1L2Q3SY69 923 aa20.56■□□□□ 0.88
TRIM3-213ENST00000533309 CABP4P57796 275 aa20.55■□□□□ 0.88
TRIM3-213ENST00000533309 GJD4Q96KN9 370 aaPredicted RBP20.55■□□□□ 0.88
TRIM3-213ENST00000533309 CACNA1FO60840 1977 aa20.54■□□□□ 0.88
TRIM3-213ENST00000533309 SMC4Q9NTJ3 1288 aa20.54■□□□□ 0.88
TRIM3-213ENST00000533309 TRPC5Q9UL62 973 aaPredicted RBP20.54■□□□□ 0.88
TRIM3-213ENST00000533309 C5P01031 1676 aa20.54■□□□□ 0.88
TRIM3-213ENST00000533309 HEG1Q9ULI3 1381 aa20.54■□□□□ 0.88
TRIM3-213ENST00000533309 ZNF790Q6PG37 636 aa20.53■□□□□ 0.88
TRIM3-213ENST00000533309 MARCH10Q8NA82 808 aaPredicted RBP20.53■□□□□ 0.88
TRIM3-213ENST00000533309 SOS1Q07889 1333 aaPredicted RBP20.52■□□□□ 0.88
TRIM3-213ENST00000533309 BRPF1P55201 1214 aaPredicted RBP20.52■□□□□ 0.88
TRIM3-213ENST00000533309 SLC39A6Q13433 755 aa20.52■□□□□ 0.88
TRIM3-213ENST00000533309 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.52■□□□□ 0.88
TRIM3-213ENST00000533309 C20orf194Q5TEA3 1177 aa20.51■□□□□ 0.87
TRIM3-213ENST00000533309 MRPL50Q8N5N7 158 aaKnown RBP20.5■□□□□ 0.87
TRIM3-213ENST00000533309 KCPQ6ZWJ8 1503 aa20.5■□□□□ 0.87
TRIM3-213ENST00000533309 TCERG1O14776 1098 aaKnown RBP20.49■□□□□ 0.87
TRIM3-213ENST00000533309 QTRT2Q9H974 415 aaKnown RBP20.49■□□□□ 0.87
TRIM3-213ENST00000533309 ONECUT3O60422 494 aaPredicted RBP20.49■□□□□ 0.87
TRIM3-213ENST00000533309 HOXB7P09629 217 aa20.49■□□□□ 0.87
TRIM3-213ENST00000533309 FRAT1Q92837 279 aaPredicted RBP20.49■□□□□ 0.87
TRIM3-213ENST00000533309 BCL9O00512 1426 aa20.49■□□□□ 0.87
TRIM3-213ENST00000533309 KIF16BQ96L93 1317 aa20.48■□□□□ 0.87
TRIM3-213ENST00000533309 LAMB4A4D0S4 1761 aa20.48■□□□□ 0.87
TRIM3-213ENST00000533309 GIGYF1O75420 1035 aaPredicted RBP20.47■□□□□ 0.87
TRIM3-213ENST00000533309 ZNF496Q96IT1 587 aaPredicted RBP20.47■□□□□ 0.87
TRIM3-213ENST00000533309 TMOD3Q9NYL9 352 aa20.47■□□□□ 0.87
TRIM3-213ENST00000533309 TNNQ9UQP3 1299 aa20.47■□□□□ 0.87
TRIM3-213ENST00000533309 PIGBQ92521 554 aa20.46■□□□□ 0.87
TRIM3-213ENST00000533309 BRWD3Q6RI45 1802 aa20.46■□□□□ 0.87
TRIM3-213ENST00000533309 A0A0G2JS52 829 aa20.45■□□□□ 0.87
TRIM3-213ENST00000533309 CANXP27824 592 aaKnown RBP20.45■□□□□ 0.87
TRIM3-213ENST00000533309 MYT1Q01538 1121 aa20.45■□□□□ 0.87
TRIM3-213ENST00000533309 TTC5Q8N0Z6 440 aa20.45■□□□□ 0.87
TRIM3-213ENST00000533309 NOB1Q9ULX3 412 aaKnown RBP20.45■□□□□ 0.87
TRIM3-213ENST00000533309 PRAMEF22A3QJZ6 481 aa20.45■□□□□ 0.86
TRIM3-213ENST00000533309 ZKSCAN2Q63HK3 967 aa20.45■□□□□ 0.86
TRIM3-213ENST00000533309 PDE3AQ14432 1141 aa20.44■□□□□ 0.86
TRIM3-213ENST00000533309 HDGFL1Q5TGJ6 251 aa20.44■□□□□ 0.86
TRIM3-213ENST00000533309 ERICH6BQ5W0A0 696 aa20.44■□□□□ 0.86
TRIM3-213ENST00000533309 SBF2Q86WG5 1849 aa20.44■□□□□ 0.86
TRIM3-213ENST00000533309 RLBP1P12271 317 aa20.43■□□□□ 0.86
TRIM3-213ENST00000533309 TRIM27P14373 513 aa20.43■□□□□ 0.86
TRIM3-213ENST00000533309 CCDC30Q5VVM6 783 aa20.43■□□□□ 0.86
TRIM3-213ENST00000533309 ZNF772Q68DY9 489 aaPredicted RBP20.43■□□□□ 0.86
TRIM3-213ENST00000533309 FMNL2Q96PY5 1086 aa20.43■□□□□ 0.86
TRIM3-213ENST00000533309 PRIM1P49642 420 aaKnown RBP20.42■□□□□ 0.86
TRIM3-213ENST00000533309 ATF7IPQ6VMQ6 1270 aa20.42■□□□□ 0.86
TRIM3-213ENST00000533309 NECTIN2Q92692 538 aa20.42■□□□□ 0.86
TRIM3-213ENST00000533309 CRBNQ96SW2 442 aa20.42■□□□□ 0.86
TRIM3-213ENST00000533309 SEPT12Q8IYM1 358 aa20.42■□□□□ 0.86
TRIM3-213ENST00000533309 EXOC6Q8TAG9 804 aa20.42■□□□□ 0.86
TRIM3-213ENST00000533309 PANK1Q8TE04 598 aa20.42■□□□□ 0.86
TRIM3-213ENST00000533309 NHSQ6T4R5 1651 aa20.41■□□□□ 0.86
TRIM3-213ENST00000533309 RGS12O14924 1447 aa20.41■□□□□ 0.86
TRIM3-213ENST00000533309 SLC4A2P04920 1241 aa20.41■□□□□ 0.86
TRIM3-213ENST00000533309 ARHGAP45Q92619 1136 aa20.41■□□□□ 0.86
TRIM3-213ENST00000533309 ATG3Q9NT62 314 aa20.41■□□□□ 0.86
TRIM3-213ENST00000533309 ASAP1Q9ULH1 1129 aa20.41■□□□□ 0.86
TRIM3-213ENST00000533309 IPO8O15397 1037 aaKnown RBP20.4■□□□□ 0.86
TRIM3-213ENST00000533309 EIF2S2P20042 333 aaKnown RBP20.4■□□□□ 0.86
TRIM3-213ENST00000533309 CLUAP1Q96AJ1 413 aa20.4■□□□□ 0.86
TRIM3-213ENST00000533309 SYTL4Q96C24 671 aaPredicted RBP20.4■□□□□ 0.86
TRIM3-213ENST00000533309 ACSBG1Q96GR2 724 aa20.4■□□□□ 0.86
TRIM3-213ENST00000533309 STK31Q9BXU1 1019 aa20.4■□□□□ 0.86
TRIM3-213ENST00000533309 SNRPA1P09661 255 aaKnown RBP20.39■□□□□ 0.86
TRIM3-213ENST00000533309 G2E3Q7L622 706 aa20.39■□□□□ 0.86
TRIM3-213ENST00000533309 CHPF2Q9P2E5 772 aa20.38■□□□□ 0.85
TRIM3-213ENST00000533309 DZIP1LQ8IYY4 767 aaKnown RBP20.38■□□□□ 0.85
TRIM3-213ENST00000533309 CHMP4AQ9BY43 222 aa20.38■□□□□ 0.85
TRIM3-213ENST00000533309 BTAF1O14981 1849 aa20.38■□□□□ 0.85
TRIM3-213ENST00000533309 TJP1Q07157 1748 aa20.37■□□□□ 0.85
TRIM3-213ENST00000533309 PTCD1O75127 700 aaKnown RBP20.37■□□□□ 0.85
TRIM3-213ENST00000533309 RBM6P78332 1123 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms