RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 FBLN1P23142 703 aa13.36□□□□□ -0.27
PPFIA1-223ENST00000532793 MARVELD3Q96A59 401 aa13.36□□□□□ -0.27
PPFIA1-223ENST00000532793 TIMELESSQ9UNS1 1208 aa13.36□□□□□ -0.27
PPFIA1-223ENST00000532793 FLT4P35916 1363 aa13.35□□□□□ -0.27
PPFIA1-223ENST00000532793 MEGF6O75095 1541 aa13.35□□□□□ -0.27
PPFIA1-223ENST00000532793 TATP17735 454 aaPredicted RBP13.35□□□□□ -0.27
PPFIA1-223ENST00000532793 PRIM1P49642 420 aaKnown RBP13.35□□□□□ -0.27
PPFIA1-223ENST00000532793 TMEM121BQ9BXQ6 578 aaPredicted RBP13.35□□□□□ -0.27
PPFIA1-223ENST00000532793 MAP2P11137 1827 aaKnown RBP13.34□□□□□ -0.27
PPFIA1-223ENST00000532793 KIF24Q5T7B8 1368 aa13.34□□□□□ -0.27
PPFIA1-223ENST00000532793 HMGB2P26583 209 aaKnown RBP13.34□□□□□ -0.27
PPFIA1-223ENST00000532793 PTGER2P43116 358 aa13.34□□□□□ -0.27
PPFIA1-223ENST00000532793 PCGF6Q9BYE7 350 aa13.34□□□□□ -0.27
PPFIA1-223ENST00000532793 FHDC1Q9C0D6 1143 aaPredicted RBP13.34□□□□□ -0.27
PPFIA1-223ENST00000532793 TFCP2L1Q9NZI6 479 aa13.34□□□□□ -0.27
PPFIA1-223ENST00000532793 CHD4Q14839 1912 aa13.34□□□□□ -0.27
PPFIA1-223ENST00000532793 PCDH11XQ9BZA7 1347 aa13.34□□□□□ -0.27
PPFIA1-223ENST00000532793 PCDH11YQ9BZA8 1340 aa13.34□□□□□ -0.27
PPFIA1-223ENST00000532793 TUBGCP6Q96RT7 1819 aa13.34□□□□□ -0.27
PPFIA1-223ENST00000532793 INSRP06213 1382 aa13.33□□□□□ -0.27
PPFIA1-223ENST00000532793 NSD3Q9BZ95 1437 aa13.33□□□□□ -0.28
PPFIA1-223ENST00000532793 POLD1P28340 1107 aa13.33□□□□□ -0.28
PPFIA1-223ENST00000532793 ZNF827Q17R98 1081 aa13.33□□□□□ -0.28
PPFIA1-223ENST00000532793 NBPF6Q5VWK0 638 aa13.33□□□□□ -0.28
PPFIA1-223ENST00000532793 RASEFQ8IZ41 740 aa13.33□□□□□ -0.28
PPFIA1-223ENST00000532793 KLHL34Q8N239 644 aa13.33□□□□□ -0.28
PPFIA1-223ENST00000532793 USHBP1Q8N6Y0 703 aa13.33□□□□□ -0.28
PPFIA1-223ENST00000532793 NBPF4Q96M43 638 aa13.33□□□□□ -0.28
PPFIA1-223ENST00000532793 ARXQ96QS3 562 aa13.33□□□□□ -0.28
PPFIA1-223ENST00000532793 POLR3GLQ9BT43 218 aa13.33□□□□□ -0.28
PPFIA1-223ENST00000532793 CLSPNQ9HAW4 1339 aa13.33□□□□□ -0.28
PPFIA1-223ENST00000532793 PPM1GO15355 546 aaPredicted RBP13.32□□□□□ -0.28
PPFIA1-223ENST00000532793 SLC16A10Q8TF71 515 aa13.32□□□□□ -0.28
PPFIA1-223ENST00000532793 SYT17Q9BSW7 474 aa13.32□□□□□ -0.28
PPFIA1-223ENST00000532793 LRRC4BQ9NT99 713 aa13.32□□□□□ -0.28
PPFIA1-223ENST00000532793 CCNL1Q9UK58 526 aaPredicted RBP13.32□□□□□ -0.28
PPFIA1-223ENST00000532793 C5P01031 1676 aa13.31□□□□□ -0.28
PPFIA1-223ENST00000532793 ANKRD26Q9UPS8 1709 aa13.31□□□□□ -0.28
PPFIA1-223ENST00000532793 HSP90AB2PQ58FF8 381 aa13.31□□□□□ -0.28
PPFIA1-223ENST00000532793 ITGB4P16144 1822 aa13.3□□□□□ -0.28
PPFIA1-223ENST00000532793 PKD1L3Q7Z443 1732 aa13.3□□□□□ -0.28
PPFIA1-223ENST00000532793 TAF1LQ8IZX4 1826 aa13.28□□□□□ -0.28
PPFIA1-223ENST00000532793 KCNQ4P56696 695 aa13.28□□□□□ -0.28
PPFIA1-223ENST00000532793 SGIP1Q9BQI5 828 aa13.28□□□□□ -0.28
PPFIA1-223ENST00000532793 EMILIN1Q9Y6C2 1016 aa13.28□□□□□ -0.28
PPFIA1-223ENST00000532793 PNPLA7Q6ZV29 1317 aa13.28□□□□□ -0.28
PPFIA1-223ENST00000532793 NSD2O96028 1365 aa13.28□□□□□ -0.28
PPFIA1-223ENST00000532793 COL24A1Q17RW2 1714 aa13.27□□□□□ -0.28
PPFIA1-223ENST00000532793 CARD14Q9BXL6 1004 aa13.27□□□□□ -0.29
PPFIA1-223ENST00000532793 SPG7Q9UQ90 795 aa13.27□□□□□ -0.29
PPFIA1-223ENST00000532793 MAP3K5Q99683 1374 aa13.27□□□□□ -0.29
PPFIA1-223ENST00000532793 GPR162Q16538 588 aa13.26□□□□□ -0.29
PPFIA1-223ENST00000532793 MPRIPQ6WCQ1 1025 aa13.26□□□□□ -0.29
PPFIA1-223ENST00000532793 KRTAP3-3Q9BYR6 98 aa13.26□□□□□ -0.29
PPFIA1-223ENST00000532793 KRTAP3-2Q9BYR7 98 aa13.26□□□□□ -0.29
PPFIA1-223ENST00000532793 TOGARAM1Q9Y4F4 1720 aa13.25□□□□□ -0.29
PPFIA1-223ENST00000532793 PALLDQ8WX93 1383 aa13.25□□□□□ -0.29
PPFIA1-223ENST00000532793 EIF4G2P78344 907 aaKnown RBP eCLIP13.25□□□□□ -0.29
PPFIA1-223ENST00000532793 SMARCC1Q92922 1105 aaPredicted RBP13.25□□□□□ -0.29
PPFIA1-223ENST00000532793 FLAD1Q8NFF5 587 aa13.24□□□□□ -0.29
PPFIA1-223ENST00000532793 CCER1Q8TC90 406 aaPredicted RBP13.24□□□□□ -0.29
PPFIA1-223ENST00000532793 WASHC2AQ641Q2 1341 aa13.23□□□□□ -0.29
PPFIA1-223ENST00000532793 C4BP0C0L5 1744 aa13.23□□□□□ -0.29
PPFIA1-223ENST00000532793 POTEB3A0JP26 581 aa13.23□□□□□ -0.29
PPFIA1-223ENST00000532793 TNNT2P45379 298 aaPredicted RBP13.23□□□□□ -0.29
PPFIA1-223ENST00000532793 IRX5P78411 483 aaPredicted RBP13.23□□□□□ -0.29
PPFIA1-223ENST00000532793 POTEBQ6S5H4 581 aa13.23□□□□□ -0.29
PPFIA1-223ENST00000532793 CYP27B1O15528 508 aa13.22□□□□□ -0.29
PPFIA1-223ENST00000532793 AK7Q96M32 723 aa13.22□□□□□ -0.29
PPFIA1-223ENST00000532793 COL23A1Q86Y22 540 aaPredicted RBP13.21□□□□□ -0.29
PPFIA1-223ENST00000532793 TMOD3Q9NYL9 352 aa13.21□□□□□ -0.29
PPFIA1-223ENST00000532793 NCAPD2Q15021 1401 aa13.21□□□□□ -0.3
PPFIA1-223ENST00000532793 IFNL2Q8IZJ0 200 aa13.2□□□□□ -0.3
PPFIA1-223ENST00000532793 EYA1Q99502 592 aa13.2□□□□□ -0.3
PPFIA1-223ENST00000532793 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.2□□□□□ -0.31e-7■■□□□ 13.2
PPFIA1-223ENST00000532793 POLKQ9UBT6 870 aa13.2□□□□□ -0.3
PPFIA1-223ENST00000532793 PCDHB13Q9Y5F0 798 aa13.2□□□□□ -0.3
PPFIA1-223ENST00000532793 UBR3Q6ZT12 1888 aa13.2□□□□□ -0.3
PPFIA1-223ENST00000532793 HSPA5P11021 654 aaKnown RBP13.19□□□□□ -0.3
PPFIA1-223ENST00000532793 PLCG2P16885 1265 aa13.19□□□□□ -0.3
PPFIA1-223ENST00000532793 MSL1Q68DK7 614 aa13.19□□□□□ -0.3
PPFIA1-223ENST00000532793 ZNF784Q8NCA9 323 aaPredicted RBP13.19□□□□□ -0.3
PPFIA1-223ENST00000532793 NKX1-1Q15270 411 aaPredicted RBP13.18□□□□□ -0.3
PPFIA1-223ENST00000532793 PANK3Q9H999 370 aa13.18□□□□□ -0.3
PPFIA1-223ENST00000532793 PLEKHG2Q9H7P9 1386 aa13.18□□□□□ -0.3
PPFIA1-223ENST00000532793 PHF14O94880 888 aa13.17□□□□□ -0.3
PPFIA1-223ENST00000532793 EIF4A2Q14240 407 aaKnown RBP13.17□□□□□ -0.3
PPFIA1-223ENST00000532793 PIGBQ92521 554 aa13.17□□□□□ -0.3
PPFIA1-223ENST00000532793 LOC102724428A0A0B4J2F2 783 aa13.16□□□□□ -0.3
PPFIA1-223ENST00000532793 GRIN3BO60391 1043 aa13.16□□□□□ -0.3
PPFIA1-223ENST00000532793 HSP90AB1P08238 724 aaKnown RBP13.16□□□□□ -0.3
PPFIA1-223ENST00000532793 PHKG2P15735 406 aa13.16□□□□□ -0.3
PPFIA1-223ENST00000532793 SIK1P57059 783 aa13.16□□□□□ -0.3
PPFIA1-223ENST00000532793 MORC1Q86VD1 984 aa13.16□□□□□ -0.3
PPFIA1-223ENST00000532793 IFNL1Q8IU54 200 aa13.16□□□□□ -0.3
PPFIA1-223ENST00000532793 NLGN2Q8NFZ4 835 aa13.16□□□□□ -0.3
PPFIA1-223ENST00000532793 ATP6V1AP38606 617 aa13.15□□□□□ -0.3
PPFIA1-223ENST00000532793 PLEKHO1Q53GL0 409 aaPredicted RBP13.15□□□□□ -0.3
PPFIA1-223ENST00000532793 KNSTRNQ9Y448 316 aa13.15□□□□□ -0.3
PPFIA1-223ENST00000532793 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms