RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 ZNF644Q9H582 1327 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-233ENST00000532787 TUBB4AP04350 444 aa8.85□□□□□ -0.99
CTNND1-233ENST00000532787 TOP1P11387 765 aaKnown RBP8.85□□□□□ -0.99
CTNND1-233ENST00000532787 PRAM1Q96QH2 718 aa8.85□□□□□ -0.99
CTNND1-233ENST00000532787 CDK19Q9BWU1 502 aa8.85□□□□□ -0.99
CTNND1-233ENST00000532787 NKTRP30414 1462 aaKnown RBP8.85□□□□□ -0.99
CTNND1-233ENST00000532787 CASTP20810 708 aaKnown RBP8.84□□□□□ -0.99
CTNND1-233ENST00000532787 PAFAH1B1P43034 410 aa8.84□□□□□ -0.99
CTNND1-233ENST00000532787 FAM193AP78312 1265 aa8.84□□□□□ -0.99
CTNND1-233ENST00000532787 TNIP1Q15025 636 aa8.84□□□□□ -0.99
CTNND1-233ENST00000532787 TMEM132EQ6IEE7 984 aa8.84□□□□□ -0.99
CTNND1-233ENST00000532787 DDX12PQ92771 950 aa8.84□□□□□ -0.99
CTNND1-233ENST00000532787 ZHX3Q9H4I2 956 aa8.84□□□□□ -0.99
CTNND1-233ENST00000532787 SYCE3A1L190 88 aa8.84□□□□□ -0.99
CTNND1-233ENST00000532787 ZNF530Q6P9A1 599 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-233ENST00000532787 GIGYF2Q6Y7W6 1299 aaKnown RBP8.84□□□□□ -0.99
CTNND1-233ENST00000532787 FAM177A1Q8N128 213 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-233ENST00000532787 PRIMPOLQ96LW4 560 aa8.84□□□□□ -0.99
CTNND1-233ENST00000532787 TAOK3Q9H2K8 898 aa8.84□□□□□ -0.99
CTNND1-233ENST00000532787 YEATS4O95619 227 aa8.84□□□□□ -0.99
CTNND1-233ENST00000532787 MX1P20591 662 aa8.84□□□□□ -0.99
CTNND1-233ENST00000532787 CWC27Q6UX04 472 aaKnown RBP8.84□□□□□ -1
CTNND1-233ENST00000532787 GPATCH11Q8N954 259 aa8.84□□□□□ -1
CTNND1-233ENST00000532787 KDM4AO75164 1064 aa8.83□□□□□ -1
CTNND1-233ENST00000532787 SEPT11Q9NVA2 429 aaKnown RBP8.83□□□□□ -1
CTNND1-233ENST00000532787 PAXBP1Q9Y5B6 917 aa8.83□□□□□ -1
CTNND1-233ENST00000532787 RBM25P49756 843 aaKnown RBP8.83□□□□□ -1
CTNND1-233ENST00000532787 KANK3Q6NY19 840 aa8.83□□□□□ -1
CTNND1-233ENST00000532787 CCDC150Q8NCX0 1101 aa8.83□□□□□ -1
CTNND1-233ENST00000532787 EHBP1Q8NDI1 1231 aa8.83□□□□□ -1
CTNND1-233ENST00000532787 RBM42Q9BTD8 480 aaKnown RBP8.83□□□□□ -1
CTNND1-233ENST00000532787 CLIP2Q9UDT6 1046 aa8.83□□□□□ -1
CTNND1-233ENST00000532787 ALS2CR12Q96Q35 445 aa8.83□□□□□ -1
CTNND1-233ENST00000532787 ERICH4A6NGS2 130 aa8.83□□□□□ -1
CTNND1-233ENST00000532787 DYNC1I1O14576 645 aa8.83□□□□□ -1
CTNND1-233ENST00000532787 FAM114A1Q8IWE2 563 aa8.83□□□□□ -1
CTNND1-233ENST00000532787 TROQ12816 1431 aaPredicted RBP8.83□□□□□ -1
CTNND1-233ENST00000532787 TIAM1Q13009 1591 aa8.83□□□□□ -1
CTNND1-233ENST00000532787 STX1AQ16623 288 aa8.82□□□□□ -1
CTNND1-233ENST00000532787 KIF4BQ2VIQ3 1234 aa8.82□□□□□ -1
CTNND1-233ENST00000532787 AIDAQ96BJ3 306 aa8.82□□□□□ -1
CTNND1-233ENST00000532787 ZMYND15Q9H091 742 aa8.82□□□□□ -1
CTNND1-233ENST00000532787 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.82□□□□□ -1
CTNND1-233ENST00000532787 CFTRP13569 1480 aa8.82□□□□□ -1
CTNND1-233ENST00000532787 NEBLO76041 1014 aa8.82□□□□□ -1
CTNND1-233ENST00000532787 ZNF76P36508 570 aa8.82□□□□□ -1
CTNND1-233ENST00000532787 IGHMBP2P38935 993 aaKnown RBP8.82□□□□□ -1
CTNND1-233ENST00000532787 BBXQ8WY36 941 aaPredicted RBP8.82□□□□□ -1
CTNND1-233ENST00000532787 LUZP1Q86V48 1076 aa8.82□□□□□ -1
CTNND1-233ENST00000532787 SEC63Q9UGP8 760 aaKnown RBP8.82□□□□□ -1
CTNND1-233ENST00000532787 LIMCH1Q9UPQ0 1083 aa8.82□□□□□ -1
CTNND1-233ENST00000532787 BTBD11A6QL63 1104 aa8.82□□□□□ -1
CTNND1-233ENST00000532787 TMPOP42166 694 aaKnown RBP8.82□□□□□ -1
CTNND1-233ENST00000532787 TUBB4BP68371 445 aa8.82□□□□□ -1
CTNND1-233ENST00000532787 FKBP4Q02790 459 aaKnown RBP eCLIP8.82□□□□□ -1
CTNND1-233ENST00000532787 THEMISQ8N1K5 641 aaPredicted RBP8.82□□□□□ -1
CTNND1-233ENST00000532787 RNF41Q9H4P4 317 aaPredicted RBP8.82□□□□□ -1
CTNND1-233ENST00000532787 GNAT3A8MTJ3 354 aa8.82□□□□□ -1
CTNND1-233ENST00000532787 TMEM266Q2M3C6 531 aa8.82□□□□□ -1
CTNND1-233ENST00000532787 LRRC27Q9C0I9 530 aa8.82□□□□□ -1
CTNND1-233ENST00000532787 SIL1Q9H173 461 aa8.82□□□□□ -1
CTNND1-233ENST00000532787 EHMT1Q9H9B1 1298 aa8.82□□□□□ -1
CTNND1-233ENST00000532787 CCDC171Q6TFL3 1326 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 BMS1Q14692 1282 aaKnown RBP8.81□□□□□ -1
CTNND1-233ENST00000532787 ESCO1Q5FWF5 840 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 CACNA2D4Q7Z3S7 1137 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 IPO4Q8TEX9 1081 aaKnown RBP8.81□□□□□ -1
CTNND1-233ENST00000532787 FEZ1Q99689 392 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 NSD2O96028 1365 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 RAD54L2Q9Y4B4 1467 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 PTPRCP08575 1304 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 NF2P35240 595 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 IFFO1Q0D2I5 559 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 LARP1Q6PKG0 1096 aaKnown RBP8.81□□□□□ -1
CTNND1-233ENST00000532787 TMEM57Q8N5G2 664 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 URI1O94763 535 aaPredicted RBP8.81□□□□□ -1
CTNND1-233ENST00000532787 TNNT1P13805 278 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 SPECC1LQ69YQ0 1117 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 PPM1EQ8WY54 764 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 C8orf76Q96K31 380 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 GOLIM4O00461 696 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 AMPD3Q01432 767 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 IFI16Q16666 785 aaKnown RBP8.81□□□□□ -1
CTNND1-233ENST00000532787 TXNDC2Q86VQ3 553 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 KCNH5Q8NCM2 988 aa8.81□□□□□ -1
CTNND1-233ENST00000532787 ZNF526Q8TF50 670 aaPredicted RBP8.81□□□□□ -1
CTNND1-233ENST00000532787 SSBP05455 408 aaKnown RBP eCLIP8.8□□□□□ -11e-7■■■■■ 26.8
CTNND1-233ENST00000532787 ARAP1Q96P48 1450 aa8.8□□□□□ -1
CTNND1-233ENST00000532787 ANKRD18BA2A2Z9 1011 aa8.8□□□□□ -1
CTNND1-233ENST00000532787 ATP2B2Q01814 1243 aa8.8□□□□□ -1
CTNND1-233ENST00000532787 FAM69CQ0P6D2 419 aa8.8□□□□□ -1
CTNND1-233ENST00000532787 DHX37Q8IY37 1157 aaKnown RBP8.8□□□□□ -1
CTNND1-233ENST00000532787 SLC12A5Q9H2X9 1139 aa8.8□□□□□ -1
CTNND1-233ENST00000532787 CABP1Q9NZU7 370 aa8.8□□□□□ -1
CTNND1-233ENST00000532787 RAI14Q9P0K7 980 aa8.8□□□□□ -1
CTNND1-233ENST00000532787 NSD3Q9BZ95 1437 aa8.8□□□□□ -1
CTNND1-233ENST00000532787 A0A087WZG4 1122 aa8.8□□□□□ -1
CTNND1-233ENST00000532787 MAP4K4O95819 1239 aaPredicted RBP8.8□□□□□ -1
CTNND1-233ENST00000532787 LRP2BPQ9P2M1 347 aa8.8□□□□□ -1
CTNND1-233ENST00000532787 PPP4R3AQ6IN85 833 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms