RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 PLEKHO1Q53GL0 409 aaPredicted RBP20.81■□□□□ 0.92
BRPF3-210ENST00000532538 HSP90AB1P08238 724 aaKnown RBP20.8■□□□□ 0.92
BRPF3-210ENST00000532538 MORC1Q86VD1 984 aa20.8■□□□□ 0.92
BRPF3-210ENST00000532538 AMIGO3Q86WK7 504 aa20.8■□□□□ 0.92
BRPF3-210ENST00000532538 ITPK1Q13572 414 aa20.79■□□□□ 0.92
BRPF3-210ENST00000532538 ATG3Q9NT62 314 aa20.79■□□□□ 0.92
BRPF3-210ENST00000532538 IGSF1Q8N6C5 1336 aa20.78■□□□□ 0.92
BRPF3-210ENST00000532538 CABP4P57796 275 aa20.78■□□□□ 0.92
BRPF3-210ENST00000532538 ZNF530Q6P9A1 599 aaPredicted RBP20.78■□□□□ 0.92
BRPF3-210ENST00000532538 C1orf141Q5JVX7 400 aa20.77■□□□□ 0.92
BRPF3-210ENST00000532538 ZNF526Q8TF50 670 aaPredicted RBP20.77■□□□□ 0.92
BRPF3-210ENST00000532538 RTCBQ9Y3I0 505 aaKnown RBP20.77■□□□□ 0.92
BRPF3-210ENST00000532538 ERVV-2B6SEH9 535 aa20.76■□□□□ 0.91
BRPF3-210ENST00000532538 TRAPPC3LQ5T215 181 aa20.76■□□□□ 0.91
BRPF3-210ENST00000532538 DCAF5Q96JK2 942 aa20.76■□□□□ 0.91
BRPF3-210ENST00000532538 KNSTRNQ9Y448 316 aa20.76■□□□□ 0.91
BRPF3-210ENST00000532538 AMOTQ4VCS5 1084 aa20.75■□□□□ 0.91
BRPF3-210ENST00000532538 GPBP1L1Q9HC44 474 aaPredicted RBP20.75■□□□□ 0.91
BRPF3-210ENST00000532538 ATP10DQ9P241 1426 aa20.75■□□□□ 0.91
BRPF3-210ENST00000532538 MMP10P09238 476 aa20.74■□□□□ 0.91
BRPF3-210ENST00000532538 MTHFSP49914 203 aa20.74■□□□□ 0.91
BRPF3-210ENST00000532538 N4BP2Q86UW6 1770 aaPredicted RBP20.74■□□□□ 0.91
BRPF3-210ENST00000532538 RFC4P35249 363 aa20.72■□□□□ 0.91
BRPF3-210ENST00000532538 COL5A3P25940 1745 aaPredicted RBP20.72■□□□□ 0.91
BRPF3-210ENST00000532538 VIRMAQ69YN4 1812 aaKnown RBP20.71■□□□□ 0.91
BRPF3-210ENST00000532538 PTCD1O75127 700 aaKnown RBP20.71■□□□□ 0.91
BRPF3-210ENST00000532538 SULT6B1Q6IMI4 303 aa20.71■□□□□ 0.91
BRPF3-210ENST00000532538 PLEKHG2Q9H7P9 1386 aa20.71■□□□□ 0.91
BRPF3-210ENST00000532538 AEBP1Q8IUX7 1158 aa20.7■□□□□ 0.9
BRPF3-210ENST00000532538 NLGN1Q8N2Q7 840 aa20.7■□□□□ 0.9
BRPF3-210ENST00000532538 CICQ96RK0 1608 aaPredicted RBP20.69■□□□□ 0.9
BRPF3-210ENST00000532538 ZNF831Q5JPB2 1677 aa20.69■□□□□ 0.9
BRPF3-210ENST00000532538 MYH14Q7Z406 1995 aaKnown RBP20.68■□□□□ 0.9
BRPF3-210ENST00000532538 SCN11AQ9UI33 1791 aa20.68■□□□□ 0.9
BRPF3-210ENST00000532538 ARHGEF1Q92888 912 aaKnown RBP20.68■□□□□ 0.9
BRPF3-210ENST00000532538 CCDC87Q9NVE4 849 aa20.68■□□□□ 0.9
BRPF3-210ENST00000532538 PARP3Q9Y6F1 533 aa20.68■□□□□ 0.9
BRPF3-210ENST00000532538 KDRP35968 1356 aa20.68■□□□□ 0.9
BRPF3-210ENST00000532538 KIF13BQ9NQT8 1826 aa20.67■□□□□ 0.9
BRPF3-210ENST00000532538 ADRA2BP18089 450 aa20.67■□□□□ 0.9
BRPF3-210ENST00000532538 RC3H1Q5TC82 1133 aaKnown RBP20.67■□□□□ 0.9
BRPF3-210ENST00000532538 NFATC2IPQ8NCF5 419 aa20.67■□□□□ 0.9
BRPF3-210ENST00000532538 SLC4A9Q96Q91 983 aa20.67■□□□□ 0.9
BRPF3-210ENST00000532538 BCS1LQ9Y276 419 aa20.67■□□□□ 0.9
BRPF3-210ENST00000532538 KDM6AO15550 1401 aaPredicted RBP20.67■□□□□ 0.9
BRPF3-210ENST00000532538 C4AP0C0L4 1744 aa20.67■□□□□ 0.9
BRPF3-210ENST00000532538 GOLGB1Q14789 3259 aaKnown RBP20.66■□□□□ 0.9
BRPF3-210ENST00000532538 RPS6KA4O75676 772 aa20.66■□□□□ 0.9
BRPF3-210ENST00000532538 CNTNAP4Q9C0A0 1308 aa20.66■□□□□ 0.9
BRPF3-210ENST00000532538 A0A0G2JLW4 131 aa20.64■□□□□ 0.89
BRPF3-210ENST00000532538 TGFB2P61812 414 aa20.64■□□□□ 0.89
BRPF3-210ENST00000532538 CNGB1Q14028 1251 aaPredicted RBP20.63■□□□□ 0.89
BRPF3-210ENST00000532538 ARHGAP27Q6ZUM4 889 aa20.63■□□□□ 0.89
BRPF3-210ENST00000532538 GYS1P13807 737 aa20.62■□□□□ 0.89
BRPF3-210ENST00000532538 CRKLP46109 303 aaKnown RBP20.62■□□□□ 0.89
BRPF3-210ENST00000532538 FCHSD2O94868 740 aa20.61■□□□□ 0.89
BRPF3-210ENST00000532538 HMOX1P09601 288 aa20.61■□□□□ 0.89
BRPF3-210ENST00000532538 IL13P35225 146 aa20.61■□□□□ 0.89
BRPF3-210ENST00000532538 PXDNLA1KZ92 1463 aa20.61■□□□□ 0.89
BRPF3-210ENST00000532538 AKAP4Q5JQC9 854 aa20.6■□□□□ 0.89
BRPF3-210ENST00000532538 TJP1Q07157 1748 aa20.6■□□□□ 0.89
BRPF3-210ENST00000532538 KIAA1551Q9HCM1 1747 aa20.6■□□□□ 0.89
BRPF3-210ENST00000532538 ADCY9O60503 1353 aa20.59■□□□□ 0.89
BRPF3-210ENST00000532538 DPEP1P16444 411 aa20.59■□□□□ 0.89
BRPF3-210ENST00000532538 CC2D1BQ5T0F9 858 aaKnown RBP20.59■□□□□ 0.89
BRPF3-210ENST00000532538 SRP68Q9UHB9 627 aaKnown RBP20.59■□□□□ 0.89
BRPF3-210ENST00000532538 C10orf71Q711Q0 1435 aa20.58■□□□□ 0.88
BRPF3-210ENST00000532538 BRCA1P38398 1863 aaKnown RBP20.58■□□□□ 0.88
BRPF3-210ENST00000532538 ZPR1O75312 459 aa20.57■□□□□ 0.88
BRPF3-210ENST00000532538 KIF7Q2M1P5 1343 aa20.56■□□□□ 0.88
BRPF3-210ENST00000532538 ARFGEF1Q9Y6D6 1849 aa20.56■□□□□ 0.88
BRPF3-210ENST00000532538 AMER1Q5JTC6 1135 aaPredicted RBP20.56■□□□□ 0.88
BRPF3-210ENST00000532538 SLC52A2Q9HAB3 445 aa20.56■□□□□ 0.88
BRPF3-210ENST00000532538 DIAPH1O60610 1272 aaKnown RBP20.55■□□□□ 0.88
BRPF3-210ENST00000532538 FKBP8Q14318 412 aa20.55■□□□□ 0.88
BRPF3-210ENST00000532538 DNAJC10Q8IXB1 793 aa20.55■□□□□ 0.88
BRPF3-210ENST00000532538 LGR6Q9HBX8 967 aa20.55■□□□□ 0.88
BRPF3-210ENST00000532538 USP42Q9H9J4 1324 aaKnown RBP20.54■□□□□ 0.88
BRPF3-210ENST00000532538 SLC39A6Q13433 755 aa20.54■□□□□ 0.88
BRPF3-210ENST00000532538 PIM2Q9P1W9 311 aa20.54■□□□□ 0.88
BRPF3-210ENST00000532538 RNMTO43148 476 aaKnown RBP20.53■□□□□ 0.88
BRPF3-210ENST00000532538 HSPA6P17066 643 aa20.53■□□□□ 0.88
BRPF3-210ENST00000532538 USPL1Q5W0Q7 1092 aa20.52■□□□□ 0.88
BRPF3-210ENST00000532538 U2SURPO15042 1029 aaKnown RBP20.51■□□□□ 0.87
BRPF3-210ENST00000532538 DALRD3Q5D0E6 543 aaKnown RBP20.51■□□□□ 0.87
BRPF3-210ENST00000532538 INTS5Q6P9B9 1019 aaKnown RBP20.51■□□□□ 0.87
BRPF3-210ENST00000532538 AFDNP55196 1824 aaKnown RBP20.5■□□□□ 0.87
BRPF3-210ENST00000532538 MTHFSDQ2M296 383 aaKnown RBP20.5■□□□□ 0.87
BRPF3-210ENST00000532538 TTC5Q8N0Z6 440 aa20.5■□□□□ 0.87
BRPF3-210ENST00000532538 KIF3CO14782 793 aa20.49■□□□□ 0.87
BRPF3-210ENST00000532538 DDR1Q08345 913 aa20.49■□□□□ 0.87
BRPF3-210ENST00000532538 C16orf71Q8IYS4 520 aaPredicted RBP20.49■□□□□ 0.87
BRPF3-210ENST00000532538 CHRNA5P30532 468 aa20.48■□□□□ 0.87
BRPF3-210ENST00000532538 C9orf131Q5VYM1 1079 aa20.48■□□□□ 0.87
BRPF3-210ENST00000532538 CYP19A1P11511 503 aaPredicted RBP20.47■□□□□ 0.87
BRPF3-210ENST00000532538 CANXP27824 592 aaKnown RBP20.47■□□□□ 0.87
BRPF3-210ENST00000532538 SBF1O95248 1867 aa20.47■□□□□ 0.87
BRPF3-210ENST00000532538 SOS1Q07889 1333 aaPredicted RBP20.47■□□□□ 0.87
BRPF3-210ENST00000532538 COL15A1P39059 1388 aa20.46■□□□□ 0.87
BRPF3-210ENST00000532538 CCDC88AQ3V6T2 1871 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms