RNA–Protein interactions for RNA: ENST00000532445.1

NCAPD3-209, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 532 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-209ENST00000532445 COL23A1Q86Y22 540 aaPredicted RBP31.39■■■□□ 2.62
NCAPD3-209ENST00000532445 ASAP1Q9ULH1 1129 aa31.39■■■□□ 2.62
NCAPD3-209ENST00000532445 CNGB1Q14028 1251 aaPredicted RBP31.38■■■□□ 2.61
NCAPD3-209ENST00000532445 DIAPH1O60610 1272 aaKnown RBP31.36■■■□□ 2.61
NCAPD3-209ENST00000532445 KLHL34Q8N239 644 aa31.36■■■□□ 2.61
NCAPD3-209ENST00000532445 ATP6V1AP38606 617 aa31.35■■■□□ 2.61
NCAPD3-209ENST00000532445 CABP4P57796 275 aa31.35■■■□□ 2.61
NCAPD3-209ENST00000532445 ATG3Q9NT62 314 aa31.35■■■□□ 2.61
NCAPD3-209ENST00000532445 CHD4Q14839 1912 aa31.35■■■□□ 2.61
NCAPD3-209ENST00000532445 COL3A1P02461 1466 aaPredicted RBP31.33■■■□□ 2.61
NCAPD3-209ENST00000532445 PHF14O94880 888 aa31.31■■■□□ 2.6
NCAPD3-209ENST00000532445 HMOX1P09601 288 aa31.31■■■□□ 2.6
NCAPD3-209ENST00000532445 LINC00116Q8NCU8 138 aa31.31■■■□□ 2.6
NCAPD3-209ENST00000532445 RBM42Q9BTD8 480 aaKnown RBP31.3■■■□□ 2.6
NCAPD3-209ENST00000532445 CICQ96RK0 1608 aaPredicted RBP31.3■■■□□ 2.6
NCAPD3-209ENST00000532445 SSFA2P28290 1259 aa31.29■■■□□ 2.6
NCAPD3-209ENST00000532445 AKAP4Q5JQC9 854 aa31.29■■■□□ 2.6
NCAPD3-209ENST00000532445 MSL1Q68DK7 614 aa31.29■■■□□ 2.6
NCAPD3-209ENST00000532445 YY1P25490 414 aa31.28■■■□□ 2.6
NCAPD3-209ENST00000532445 ITPK1Q13572 414 aa31.28■■■□□ 2.6
NCAPD3-209ENST00000532445 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.27■■■□□ 2.6
NCAPD3-209ENST00000532445 ADAMTS7Q9UKP4 1686 aa31.27■■■□□ 2.6
NCAPD3-209ENST00000532445 TJP1Q07157 1748 aa31.27■■■□□ 2.6
NCAPD3-209ENST00000532445 GNPATO15228 680 aa31.26■■■□□ 2.59
NCAPD3-209ENST00000532445 MRC1P22897 1456 aa31.25■■■□□ 2.59
NCAPD3-209ENST00000532445 C4AP0C0L4 1744 aa31.24■■■□□ 2.59
NCAPD3-209ENST00000532445 U2SURPO15042 1029 aaKnown RBP31.23■■■□□ 2.59
NCAPD3-209ENST00000532445 CFAP53Q96M91 514 aa31.23■■■□□ 2.59
NCAPD3-209ENST00000532445 NFATC2IPQ8NCF5 419 aa31.22■■■□□ 2.59
NCAPD3-209ENST00000532445 MYH14Q7Z406 1995 aaKnown RBP31.21■■■□□ 2.59
NCAPD3-209ENST00000532445 AMIGO3Q86WK7 504 aa31.21■■■□□ 2.59
NCAPD3-209ENST00000532445 PTCD1O75127 700 aaKnown RBP31.18■■■□□ 2.58
NCAPD3-209ENST00000532445 GPR162Q16538 588 aa31.18■■■□□ 2.58
NCAPD3-209ENST00000532445 RTCBQ9Y3I0 505 aaKnown RBP31.18■■■□□ 2.58
NCAPD3-209ENST00000532445 CNTNAP4Q9C0A0 1308 aa31.18■■■□□ 2.58
NCAPD3-209ENST00000532445 MTHFSDQ2M296 383 aaKnown RBP31.17■■■□□ 2.58
NCAPD3-209ENST00000532445 SMIM5Q71RC9 77 aa31.17■■■□□ 2.58
NCAPD3-209ENST00000532445 SLC4A9Q96Q91 983 aa31.17■■■□□ 2.58
NCAPD3-209ENST00000532445 SLC52A2Q9HAB3 445 aa31.17■■■□□ 2.58
NCAPD3-209ENST00000532445 UBR2Q8IWV8 1755 aa31.17■■■□□ 2.58
NCAPD3-209ENST00000532445 SIPA1L3O60292 1781 aaPredicted RBP31.15■■■□□ 2.58
NCAPD3-209ENST00000532445 RNMTO43148 476 aaKnown RBP31.15■■■□□ 2.58
NCAPD3-209ENST00000532445 RC3H1Q5TC82 1133 aaKnown RBP31.15■■■□□ 2.58
NCAPD3-209ENST00000532445 PELP1Q8IZL8 1130 aaKnown RBP31.15■■■□□ 2.58
NCAPD3-209ENST00000532445 NLGN2Q8NFZ4 835 aa31.15■■■□□ 2.58
NCAPD3-209ENST00000532445 LGR6Q9HBX8 967 aa31.14■■■□□ 2.58
NCAPD3-209ENST00000532445 TRAPPC3LQ5T215 181 aa31.13■■■□□ 2.57
NCAPD3-209ENST00000532445 ADRA2BP18089 450 aa31.12■■■□□ 2.57
NCAPD3-209ENST00000532445 NUDCQ9Y266 331 aa31.12■■■□□ 2.57
NCAPD3-209ENST00000532445 GAS2L2Q8NHY3 880 aa31.11■■■□□ 2.57
NCAPD3-209ENST00000532445 CD2APQ9Y5K6 639 aa31.11■■■□□ 2.57
NCAPD3-209ENST00000532445 PPP2R1AP30153 589 aa31.1■■■□□ 2.57
NCAPD3-209ENST00000532445 KIF13BQ9NQT8 1826 aa31.1■■■□□ 2.57
NCAPD3-209ENST00000532445 RPS6KA4O75676 772 aa31.09■■■□□ 2.57
NCAPD3-209ENST00000532445 KCPQ6ZWJ8 1503 aa31.08■■■□□ 2.57
NCAPD3-209ENST00000532445 RFC4P35249 363 aa31.07■■■□□ 2.56
NCAPD3-209ENST00000532445 CRKLP46109 303 aaKnown RBP31.07■■■□□ 2.56
NCAPD3-209ENST00000532445 GNAT3A8MTJ3 354 aa31.05■■■□□ 2.56
NCAPD3-209ENST00000532445 PRKAR2BP31323 418 aa31.04■■■□□ 2.56
NCAPD3-209ENST00000532445 ARHGEF1Q92888 912 aaKnown RBP31.04■■■□□ 2.56
NCAPD3-209ENST00000532445 TEFQ10587 303 aa31.03■■■□□ 2.56
NCAPD3-209ENST00000532445 SLC39A6Q13433 755 aa31.03■■■□□ 2.56
NCAPD3-209ENST00000532445 NLGN1Q8N2Q7 840 aa31.03■■■□□ 2.56
NCAPD3-209ENST00000532445 MMP10P09238 476 aa31.02■■■□□ 2.56
NCAPD3-209ENST00000532445 RSPH6AQ9H0K4 717 aa31.02■■■□□ 2.56
NCAPD3-209ENST00000532445 U2AF1L5P0DN76 240 aaPredicted RBP31.01■■■□□ 2.55
NCAPD3-209ENST00000532445 U2AF1Q01081 240 aaKnown RBP eCLIP31.01■■■□□ 2.55
NCAPD3-209ENST00000532445 TTC5Q8N0Z6 440 aa31.01■■■□□ 2.55
NCAPD3-209ENST00000532445 N4BP2Q86UW6 1770 aaPredicted RBP31.01■■■□□ 2.55
NCAPD3-209ENST00000532445 GRIN3BO60391 1043 aa31■■■□□ 2.55
NCAPD3-209ENST00000532445 DNAJC10Q8IXB1 793 aa31■■■□□ 2.55
NCAPD3-209ENST00000532445 CCDC87Q9NVE4 849 aa30.99■■■□□ 2.55
NCAPD3-209ENST00000532445 KIAA1551Q9HCM1 1747 aa30.98■■■□□ 2.55
NCAPD3-209ENST00000532445 DLG5Q8TDM6 1919 aa30.98■■■□□ 2.55
NCAPD3-209ENST00000532445 GYS1P13807 737 aa30.97■■■□□ 2.55
NCAPD3-209ENST00000532445 YBX3P16989 372 aaKnown RBP eCLIP30.97■■■□□ 2.55
NCAPD3-209ENST00000532445 VSIG10Q8N0Z9 540 aa30.96■■■□□ 2.55
NCAPD3-209ENST00000532445 PHACTR3Q96KR7 559 aa30.95■■■□□ 2.55
NCAPD3-209ENST00000532445 USP42Q9H9J4 1324 aaKnown RBP30.95■■■□□ 2.54
NCAPD3-209ENST00000532445 FCHSD2O94868 740 aa30.94■■■□□ 2.54
NCAPD3-209ENST00000532445 INTS5Q6P9B9 1019 aaKnown RBP30.94■■■□□ 2.54
NCAPD3-209ENST00000532445 IL17REQ8NFR9 667 aa30.94■■■□□ 2.54
NCAPD3-209ENST00000532445 PARP3Q9Y6F1 533 aa30.94■■■□□ 2.54
NCAPD3-209ENST00000532445 CEMIPQ8WUJ3 1361 aa30.93■■■□□ 2.54
NCAPD3-209ENST00000532445 CYP19A1P11511 503 aaPredicted RBP30.93■■■□□ 2.54
NCAPD3-209ENST00000532445 C10orf71Q711Q0 1435 aa30.92■■■□□ 2.54
NCAPD3-209ENST00000532445 BRCA1P38398 1863 aaKnown RBP30.92■■■□□ 2.54
NCAPD3-209ENST00000532445 NEFMP07197 916 aa30.91■■■□□ 2.54
NCAPD3-209ENST00000532445 ZNF784Q8NCA9 323 aaPredicted RBP30.91■■■□□ 2.54
NCAPD3-209ENST00000532445 RTF1Q92541 710 aaKnown RBP30.91■■■□□ 2.54
NCAPD3-209ENST00000532445 SOS1Q07889 1333 aaPredicted RBP30.91■■■□□ 2.54
NCAPD3-209ENST00000532445 COL15A1P39059 1388 aa30.91■■■□□ 2.54
NCAPD3-209ENST00000532445 ZNF790Q6PG37 636 aa30.9■■■□□ 2.54
NCAPD3-209ENST00000532445 SRP68Q9UHB9 627 aaKnown RBP30.9■■■□□ 2.54
NCAPD3-209ENST00000532445 ZPR1O75312 459 aa30.89■■■□□ 2.54
NCAPD3-209ENST00000532445 AFDNP55196 1824 aaKnown RBP30.89■■■□□ 2.53
NCAPD3-209ENST00000532445 PXDNLA1KZ92 1463 aa30.89■■■□□ 2.53
NCAPD3-209ENST00000532445 UTRNP46939 3433 aa30.88■■■□□ 2.53
NCAPD3-209ENST00000532445 HEG1Q9ULI3 1381 aa30.88■■■□□ 2.53
NCAPD3-209ENST00000532445 STARD3NLO95772 234 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms