RNA–Protein interactions for RNA: ENST00000531875.2

RECQL4-204, Transcript of RecQ like helicase 4, humanhuman

TSL 5

Gene RECQL4, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-204ENST00000531875 SSFA2P28290 1259 aa22.18■■□□□ 1.14
RECQL4-204ENST00000531875 NKX1-1Q15270 411 aaPredicted RBP22.18■■□□□ 1.14
RECQL4-204ENST00000531875 MORC1Q86VD1 984 aa22.18■■□□□ 1.14
RECQL4-204ENST00000531875 POLKQ9UBT6 870 aa22.18■■□□□ 1.14
RECQL4-204ENST00000531875 LOC102724428A0A0B4J2F2 783 aa22.17■■□□□ 1.14
RECQL4-204ENST00000531875 SIK1P57059 783 aa22.17■■□□□ 1.14
RECQL4-204ENST00000531875 ITPK1Q13572 414 aa22.16■■□□□ 1.14
RECQL4-204ENST00000531875 KIAA1551Q9HCM1 1747 aa22.16■■□□□ 1.14
RECQL4-204ENST00000531875 ZEB1P37275 1124 aaPredicted RBP22.14■■□□□ 1.13
RECQL4-204ENST00000531875 ASAP1Q9ULH1 1129 aa22.14■■□□□ 1.13
RECQL4-204ENST00000531875 KIF13BQ9NQT8 1826 aa22.14■■□□□ 1.13
RECQL4-204ENST00000531875 PXDNLA1KZ92 1463 aa22.14■■□□□ 1.13
RECQL4-204ENST00000531875 CC2D1BQ5T0F9 858 aaKnown RBP22.13■■□□□ 1.13
RECQL4-204ENST00000531875 GNPATO15228 680 aa22.12■■□□□ 1.13
RECQL4-204ENST00000531875 MMP10P09238 476 aa22.11■■□□□ 1.13
RECQL4-204ENST00000531875 N4BP2Q86UW6 1770 aaPredicted RBP22.11■■□□□ 1.13
RECQL4-204ENST00000531875 SPG7Q9UQ90 795 aa22.1■■□□□ 1.13
RECQL4-204ENST00000531875 ATP6V1AP38606 617 aa22.09■■□□□ 1.13
RECQL4-204ENST00000531875 TMOD3Q9NYL9 352 aa22.09■■□□□ 1.13
RECQL4-204ENST00000531875 NPC1L1Q9UHC9 1359 aa22.09■■□□□ 1.13
RECQL4-204ENST00000531875 EYA1Q99502 592 aa22.08■■□□□ 1.13
RECQL4-204ENST00000531875 ATG3Q9NT62 314 aa22.08■■□□□ 1.13
RECQL4-204ENST00000531875 CNGB1Q14028 1251 aaPredicted RBP22.07■■□□□ 1.12
RECQL4-204ENST00000531875 DNAJC5GQ8N7S2 189 aa22.07■■□□□ 1.12
RECQL4-204ENST00000531875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.07■■□□□ 1.12
RECQL4-204ENST00000531875 KDRP35968 1356 aa22.07■■□□□ 1.12
RECQL4-204ENST00000531875 C10orf71Q711Q0 1435 aa22.06■■□□□ 1.12
RECQL4-204ENST00000531875 A0A0G2JLW4 131 aa22.06■■□□□ 1.12
RECQL4-204ENST00000531875 PHKG2P15735 406 aa22.06■■□□□ 1.12
RECQL4-204ENST00000531875 APLP1P51693 650 aa22.06■■□□□ 1.12
RECQL4-204ENST00000531875 SLC4A9Q96Q91 983 aa22.06■■□□□ 1.12
RECQL4-204ENST00000531875 EIF4A2Q14240 407 aaKnown RBP22.05■■□□□ 1.12
RECQL4-204ENST00000531875 BCS1LQ9Y276 419 aa22.05■■□□□ 1.12
RECQL4-204ENST00000531875 TOMM70O94826 608 aa22.04■■□□□ 1.12
RECQL4-204ENST00000531875 TGFB2P61812 414 aa22.04■■□□□ 1.12
RECQL4-204ENST00000531875 BRCA1P38398 1863 aaKnown RBP22.03■■□□□ 1.12
RECQL4-204ENST00000531875 IFNL2Q8IZJ0 200 aa22.03■■□□□ 1.12
RECQL4-204ENST00000531875 NMRK2Q9NPI5 230 aa22.03■■□□□ 1.12
RECQL4-204ENST00000531875 ZNF831Q5JPB2 1677 aa22.01■■□□□ 1.11
RECQL4-204ENST00000531875 C4AP0C0L4 1744 aa22.01■■□□□ 1.11
RECQL4-204ENST00000531875 COL5A3P25940 1745 aaPredicted RBP22.01■■□□□ 1.11
RECQL4-204ENST00000531875 DPEP1P16444 411 aa22.01■■□□□ 1.11
RECQL4-204ENST00000531875 MTHFSP49914 203 aa22.01■■□□□ 1.11
RECQL4-204ENST00000531875 TRAPPC3LQ5T215 181 aa22■■□□□ 1.11
RECQL4-204ENST00000531875 ARHGAP27Q6ZUM4 889 aa22■■□□□ 1.11
RECQL4-204ENST00000531875 NLGN1Q8N2Q7 840 aa22■■□□□ 1.11
RECQL4-204ENST00000531875 ARHGEF1Q92888 912 aaKnown RBP22■■□□□ 1.11
RECQL4-204ENST00000531875 RTCBQ9Y3I0 505 aaKnown RBP22■■□□□ 1.11
RECQL4-204ENST00000531875 GYS1P13807 737 aa21.99■■□□□ 1.11
RECQL4-204ENST00000531875 MYH14Q7Z406 1995 aaKnown RBP21.98■■□□□ 1.11
RECQL4-204ENST00000531875 KCNA3P22001 575 aa21.98■■□□□ 1.11
RECQL4-204ENST00000531875 WDR90Q96KV7 1748 aa21.97■■□□□ 1.11
RECQL4-204ENST00000531875 RC3H1Q5TC82 1133 aaKnown RBP21.97■■□□□ 1.11
RECQL4-204ENST00000531875 FCHSD2O94868 740 aa21.96■■□□□ 1.11
RECQL4-204ENST00000531875 ADRA2BP18089 450 aa21.96■■□□□ 1.11
RECQL4-204ENST00000531875 RBM42Q9BTD8 480 aaKnown RBP21.96■■□□□ 1.11
RECQL4-204ENST00000531875 CCDC87Q9NVE4 849 aa21.96■■□□□ 1.11
RECQL4-204ENST00000531875 CNTNAP4Q9C0A0 1308 aa21.96■■□□□ 1.11
RECQL4-204ENST00000531875 ARFGEF1Q9Y6D6 1849 aa21.96■■□□□ 1.11
RECQL4-204ENST00000531875 IL13P35225 146 aa21.95■■□□□ 1.1
RECQL4-204ENST00000531875 ERVV-2B6SEH9 535 aa21.94■■□□□ 1.1
RECQL4-204ENST00000531875 RPS6KA4O75676 772 aa21.94■■□□□ 1.1
RECQL4-204ENST00000531875 HTRA3P83110 453 aa21.94■■□□□ 1.1
RECQL4-204ENST00000531875 DDX10Q13206 875 aaKnown RBP21.94■■□□□ 1.1
RECQL4-204ENST00000531875 C9orf131Q5VYM1 1079 aa21.94■■□□□ 1.1
RECQL4-204ENST00000531875 PLEKHG2Q9H7P9 1386 aa21.94■■□□□ 1.1
RECQL4-204ENST00000531875 KDM6AO15550 1401 aaPredicted RBP21.93■■□□□ 1.1
RECQL4-204ENST00000531875 RBM46Q8TBY0 533 aaKnown RBP21.93■■□□□ 1.1
RECQL4-204ENST00000531875 RFC4P35249 363 aa21.92■■□□□ 1.1
RECQL4-204ENST00000531875 PARP3Q9Y6F1 533 aa21.92■■□□□ 1.1
RECQL4-204ENST00000531875 DCAF5Q96JK2 942 aa21.91■■□□□ 1.1
RECQL4-204ENST00000531875 KCPQ6ZWJ8 1503 aa21.9■■□□□ 1.1
RECQL4-204ENST00000531875 DIAPH1O60610 1272 aaKnown RBP21.9■■□□□ 1.1
RECQL4-204ENST00000531875 AEBP1Q8IUX7 1158 aa21.9■■□□□ 1.1
RECQL4-204ENST00000531875 PCNTO95613 3336 aa21.89■■□□□ 1.1
RECQL4-204ENST00000531875 PPP2R1AP30153 589 aa21.89■■□□□ 1.09
RECQL4-204ENST00000531875 DDR1Q08345 913 aa21.89■■□□□ 1.09
RECQL4-204ENST00000531875 SULT6B1Q6IMI4 303 aa21.89■■□□□ 1.09
RECQL4-204ENST00000531875 KLRG1Q96E93 195 aa21.89■■□□□ 1.09
RECQL4-204ENST00000531875 PIM2Q9P1W9 311 aa21.89■■□□□ 1.09
RECQL4-204ENST00000531875 SRP68Q9UHB9 627 aaKnown RBP21.89■■□□□ 1.09
RECQL4-204ENST00000531875 FKBP8Q14318 412 aa21.88■■□□□ 1.09
RECQL4-204ENST00000531875 JMYQ8N9B5 988 aa21.88■■□□□ 1.09
RECQL4-204ENST00000531875 COL3A1P02461 1466 aaPredicted RBP21.88■■□□□ 1.09
RECQL4-204ENST00000531875 CRKLP46109 303 aaKnown RBP21.87■■□□□ 1.09
RECQL4-204ENST00000531875 COL13A1Q5TAT6 717 aaPredicted RBP21.87■■□□□ 1.09
RECQL4-204ENST00000531875 ADAMTS7Q9UKP4 1686 aa21.87■■□□□ 1.09
RECQL4-204ENST00000531875 TJP1Q07157 1748 aa21.86■■□□□ 1.09
RECQL4-204ENST00000531875 USP42Q9H9J4 1324 aaKnown RBP21.86■■□□□ 1.09
RECQL4-204ENST00000531875 SBF1O95248 1867 aa21.86■■□□□ 1.09
RECQL4-204ENST00000531875 PTCD1O75127 700 aaKnown RBP21.86■■□□□ 1.09
RECQL4-204ENST00000531875 HSP90AB1P08238 724 aaKnown RBP21.86■■□□□ 1.09
RECQL4-204ENST00000531875 FSTL1Q12841 308 aa21.86■■□□□ 1.09
RECQL4-204ENST00000531875 DALRD3Q5D0E6 543 aaKnown RBP21.86■■□□□ 1.09
RECQL4-204ENST00000531875 CHRNA5P30532 468 aa21.85■■□□□ 1.09
RECQL4-204ENST00000531875 CABP4P57796 275 aa21.85■■□□□ 1.09
RECQL4-204ENST00000531875 ZNF530Q6P9A1 599 aaPredicted RBP21.85■■□□□ 1.09
RECQL4-204ENST00000531875 C16orf71Q8IYS4 520 aaPredicted RBP21.85■■□□□ 1.09
RECQL4-204ENST00000531875 RNF181Q9P0P0 153 aa21.85■■□□□ 1.09
RECQL4-204ENST00000531875 PLEKHO1Q53GL0 409 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms