RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 TNNT2P45379 298 aaPredicted RBP23.96■■□□□ 1.43
PKP3-208ENST00000531857 EIF4A2Q14240 407 aaKnown RBP23.96■■□□□ 1.43
PKP3-208ENST00000531857 ZNF526Q8TF50 670 aaPredicted RBP23.96■■□□□ 1.43
PKP3-208ENST00000531857 PCGF6Q9BYE7 350 aa23.96■■□□□ 1.43
PKP3-208ENST00000531857 GPBP1L1Q9HC44 474 aaPredicted RBP23.96■■□□□ 1.43
PKP3-208ENST00000531857 COL5A3P25940 1745 aaPredicted RBP23.95■■□□□ 1.42
PKP3-208ENST00000531857 ZNF831Q5JPB2 1677 aa23.95■■□□□ 1.42
PKP3-208ENST00000531857 POLR3GLQ9BT43 218 aa23.93■■□□□ 1.42
PKP3-208ENST00000531857 KDRP35968 1356 aa23.91■■□□□ 1.42
PKP3-208ENST00000531857 SLC4A9Q96Q91 983 aa23.91■■□□□ 1.42
PKP3-208ENST00000531857 MYH14Q7Z406 1995 aaKnown RBP23.91■■□□□ 1.42
PKP3-208ENST00000531857 MMP10P09238 476 aa23.9■■□□□ 1.42
PKP3-208ENST00000531857 CICQ96RK0 1608 aaPredicted RBP23.9■■□□□ 1.42
PKP3-208ENST00000531857 C4AP0C0L4 1744 aa23.89■■□□□ 1.41
PKP3-208ENST00000531857 PXDNLA1KZ92 1463 aa23.88■■□□□ 1.41
PKP3-208ENST00000531857 TIMELESSQ9UNS1 1208 aa23.88■■□□□ 1.41
PKP3-208ENST00000531857 BRCA1P38398 1863 aaKnown RBP23.87■■□□□ 1.41
PKP3-208ENST00000531857 RBM42Q9BTD8 480 aaKnown RBP23.87■■□□□ 1.41
PKP3-208ENST00000531857 ERVV-2B6SEH9 535 aa23.86■■□□□ 1.41
PKP3-208ENST00000531857 TRAPPC3LQ5T215 181 aa23.86■■□□□ 1.41
PKP3-208ENST00000531857 RTCBQ9Y3I0 505 aaKnown RBP23.86■■□□□ 1.41
PKP3-208ENST00000531857 PLEKHG2Q9H7P9 1386 aa23.86■■□□□ 1.41
PKP3-208ENST00000531857 KDM6AO15550 1401 aaPredicted RBP23.85■■□□□ 1.41
PKP3-208ENST00000531857 ARHGEF1Q92888 912 aaKnown RBP23.84■■□□□ 1.41
PKP3-208ENST00000531857 DCAF5Q96JK2 942 aa23.84■■□□□ 1.41
PKP3-208ENST00000531857 A0A0G2JLW4 131 aa23.83■■□□□ 1.41
PKP3-208ENST00000531857 HSPA6P17066 643 aa23.83■■□□□ 1.41
PKP3-208ENST00000531857 C10orf71Q711Q0 1435 aa23.83■■□□□ 1.4
PKP3-208ENST00000531857 PLEKHO1Q53GL0 409 aaPredicted RBP23.82■■□□□ 1.4
PKP3-208ENST00000531857 RC3H1Q5TC82 1133 aaKnown RBP23.82■■□□□ 1.4
PKP3-208ENST00000531857 ZNF530Q6P9A1 599 aaPredicted RBP23.82■■□□□ 1.4
PKP3-208ENST00000531857 NLGN1Q8N2Q7 840 aa23.82■■□□□ 1.4
PKP3-208ENST00000531857 PANK3Q9H999 370 aa23.82■■□□□ 1.4
PKP3-208ENST00000531857 KIF3CO14782 793 aa23.81■■□□□ 1.4
PKP3-208ENST00000531857 HSP90AB1P08238 724 aaKnown RBP23.81■■□□□ 1.4
PKP3-208ENST00000531857 TGFB2P61812 414 aa23.81■■□□□ 1.4
PKP3-208ENST00000531857 CNTNAP4Q9C0A0 1308 aa23.81■■□□□ 1.4
PKP3-208ENST00000531857 GYS1P13807 737 aa23.8■■□□□ 1.4
PKP3-208ENST00000531857 CABP4P57796 275 aa23.8■■□□□ 1.4
PKP3-208ENST00000531857 TJP1Q07157 1748 aa23.8■■□□□ 1.4
PKP3-208ENST00000531857 AEBP1Q8IUX7 1158 aa23.8■■□□□ 1.4
PKP3-208ENST00000531857 BCS1LQ9Y276 419 aa23.8■■□□□ 1.4
PKP3-208ENST00000531857 SCN11AQ9UI33 1791 aa23.8■■□□□ 1.4
PKP3-208ENST00000531857 RPS6KA4O75676 772 aa23.79■■□□□ 1.4
PKP3-208ENST00000531857 ADRA2BP18089 450 aa23.79■■□□□ 1.4
PKP3-208ENST00000531857 IFFO2Q5TF58 517 aa23.79■■□□□ 1.4
PKP3-208ENST00000531857 VIRMAQ69YN4 1812 aaKnown RBP23.79■■□□□ 1.4
PKP3-208ENST00000531857 ARFGEF1Q9Y6D6 1849 aa23.79■■□□□ 1.4
PKP3-208ENST00000531857 DPEP1P16444 411 aa23.78■■□□□ 1.4
PKP3-208ENST00000531857 RFC4P35249 363 aa23.78■■□□□ 1.4
PKP3-208ENST00000531857 HSPA5P11021 654 aaKnown RBP23.77■■□□□ 1.4
PKP3-208ENST00000531857 AMOTQ4VCS5 1084 aa23.77■■□□□ 1.4
PKP3-208ENST00000531857 PTCD1O75127 700 aaKnown RBP23.76■■□□□ 1.39
PKP3-208ENST00000531857 MTHFSP49914 203 aa23.76■■□□□ 1.39
PKP3-208ENST00000531857 CCDC87Q9NVE4 849 aa23.76■■□□□ 1.39
PKP3-208ENST00000531857 EIF4G2P78344 907 aaKnown RBP eCLIP23.75■■□□□ 1.39
PKP3-208ENST00000531857 ARHGAP27Q6ZUM4 889 aa23.75■■□□□ 1.39
PKP3-208ENST00000531857 NFATC2IPQ8NCF5 419 aa23.75■■□□□ 1.39
PKP3-208ENST00000531857 PARP3Q9Y6F1 533 aa23.75■■□□□ 1.39
PKP3-208ENST00000531857 ADAMTS7Q9UKP4 1686 aa23.74■■□□□ 1.39
PKP3-208ENST00000531857 MORC1Q86VD1 984 aa23.74■■□□□ 1.39
PKP3-208ENST00000531857 CLSPNQ9HAW4 1339 aa23.74■■□□□ 1.39
PKP3-208ENST00000531857 KCNA3P22001 575 aa23.73■■□□□ 1.39
PKP3-208ENST00000531857 CRKLP46109 303 aaKnown RBP23.73■■□□□ 1.39
PKP3-208ENST00000531857 C1orf141Q5JVX7 400 aa23.73■■□□□ 1.39
PKP3-208ENST00000531857 SULT6B1Q6IMI4 303 aa23.73■■□□□ 1.39
PKP3-208ENST00000531857 SRP68Q9UHB9 627 aaKnown RBP23.73■■□□□ 1.39
PKP3-208ENST00000531857 FCHSD2O94868 740 aa23.72■■□□□ 1.39
PKP3-208ENST00000531857 FKBP8Q14318 412 aa23.7■■□□□ 1.38
PKP3-208ENST00000531857 SBF1O95248 1867 aa23.69■■□□□ 1.38
PKP3-208ENST00000531857 IL13P35225 146 aa23.69■■□□□ 1.38
PKP3-208ENST00000531857 USP42Q9H9J4 1324 aaKnown RBP23.68■■□□□ 1.38
PKP3-208ENST00000531857 DDR1Q08345 913 aa23.68■■□□□ 1.38
PKP3-208ENST00000531857 NMRK2Q9NPI5 230 aa23.68■■□□□ 1.38
PKP3-208ENST00000531857 INTS5Q6P9B9 1019 aaKnown RBP23.67■■□□□ 1.38
PKP3-208ENST00000531857 AFDNP55196 1824 aaKnown RBP23.67■■□□□ 1.38
PKP3-208ENST00000531857 TOMM70O94826 608 aa23.66■■□□□ 1.38
PKP3-208ENST00000531857 C9orf131Q5VYM1 1079 aa23.65■■□□□ 1.38
PKP3-208ENST00000531857 PIM2Q9P1W9 311 aa23.65■■□□□ 1.38
PKP3-208ENST00000531857 CHRNA5P30532 468 aa23.63■■□□□ 1.37
PKP3-208ENST00000531857 APLP1P51693 650 aa23.63■■□□□ 1.37
PKP3-208ENST00000531857 DNAJC10Q8IXB1 793 aa23.63■■□□□ 1.37
PKP3-208ENST00000531857 LGR6Q9HBX8 967 aa23.63■■□□□ 1.37
PKP3-208ENST00000531857 KNSTRNQ9Y448 316 aa23.63■■□□□ 1.37
PKP3-208ENST00000531857 WDR90Q96KV7 1748 aa23.62■■□□□ 1.37
PKP3-208ENST00000531857 TM4SF1P30408 202 aa23.62■■□□□ 1.37
PKP3-208ENST00000531857 DALRD3Q5D0E6 543 aaKnown RBP23.62■■□□□ 1.37
PKP3-208ENST00000531857 AKAP4Q5JQC9 854 aa23.62■■□□□ 1.37
PKP3-208ENST00000531857 POLRMTO00411 1230 aaKnown RBP23.61■■□□□ 1.37
PKP3-208ENST00000531857 SLC52A2Q9HAB3 445 aa23.61■■□□□ 1.37
PKP3-208ENST00000531857 MRC1P22897 1456 aa23.61■■□□□ 1.37
PKP3-208ENST00000531857 AMER1Q5JTC6 1135 aaPredicted RBP23.6■■□□□ 1.37
PKP3-208ENST00000531857 USPL1Q5W0Q7 1092 aa23.6■■□□□ 1.37
PKP3-208ENST00000531857 DNAJC5GQ8N7S2 189 aa23.6■■□□□ 1.37
PKP3-208ENST00000531857 SOS1Q07889 1333 aaPredicted RBP23.59■■□□□ 1.37
PKP3-208ENST00000531857 KCPQ6ZWJ8 1503 aa23.59■■□□□ 1.37
PKP3-208ENST00000531857 NRXN2Q9P2S2 1712 aa23.59■■□□□ 1.37
PKP3-208ENST00000531857 SLC39A6Q13433 755 aa23.59■■□□□ 1.37
PKP3-208ENST00000531857 DLEC1Q9Y238 1755 aa23.59■■□□□ 1.37
PKP3-208ENST00000531857 CCDC88AQ3V6T2 1871 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms