RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 GNPATO15228 680 aa26.29■■□□□ 1.8
UBXN1-212ENST00000531625 ATG3Q9NT62 314 aa26.29■■□□□ 1.8
UBXN1-212ENST00000531625 EIF4A2Q14240 407 aaKnown RBP26.28■■□□□ 1.8
UBXN1-212ENST00000531625 KDRP35968 1356 aa26.24■■□□□ 1.79
UBXN1-212ENST00000531625 ERVV-2B6SEH9 535 aa26.24■■□□□ 1.79
UBXN1-212ENST00000531625 MMP10P09238 476 aa26.23■■□□□ 1.79
UBXN1-212ENST00000531625 WWC3Q9ULE0 1092 aa26.22■■□□□ 1.79
UBXN1-212ENST00000531625 HSP90AB1P08238 724 aaKnown RBP26.21■■□□□ 1.79
UBXN1-212ENST00000531625 TNNT2P45379 298 aaPredicted RBP26.21■■□□□ 1.79
UBXN1-212ENST00000531625 TRAPPC3LQ5T215 181 aa26.21■■□□□ 1.79
UBXN1-212ENST00000531625 RC3H1Q5TC82 1133 aaKnown RBP26.21■■□□□ 1.79
UBXN1-212ENST00000531625 DCAF5Q96JK2 942 aa26.21■■□□□ 1.79
UBXN1-212ENST00000531625 RTCBQ9Y3I0 505 aaKnown RBP26.21■■□□□ 1.79
UBXN1-212ENST00000531625 ZNF831Q5JPB2 1677 aa26.21■■□□□ 1.79
UBXN1-212ENST00000531625 NLGN1Q8N2Q7 840 aa26.2■■□□□ 1.78
UBXN1-212ENST00000531625 ZNF526Q8TF50 670 aaPredicted RBP26.2■■□□□ 1.78
UBXN1-212ENST00000531625 SLC4A9Q96Q91 983 aa26.2■■□□□ 1.78
UBXN1-212ENST00000531625 CICQ96RK0 1608 aaPredicted RBP26.19■■□□□ 1.78
UBXN1-212ENST00000531625 HSPA6P17066 643 aa26.19■■□□□ 1.78
UBXN1-212ENST00000531625 ADRA2BP18089 450 aa26.19■■□□□ 1.78
UBXN1-212ENST00000531625 KIF13BQ9NQT8 1826 aa26.18■■□□□ 1.78
UBXN1-212ENST00000531625 TGFB2P61812 414 aa26.18■■□□□ 1.78
UBXN1-212ENST00000531625 PXDNLA1KZ92 1463 aa26.17■■□□□ 1.78
UBXN1-212ENST00000531625 PLEKHO1Q53GL0 409 aaPredicted RBP26.17■■□□□ 1.78
UBXN1-212ENST00000531625 CNTNAP4Q9C0A0 1308 aa26.16■■□□□ 1.78
UBXN1-212ENST00000531625 POLR3GLQ9BT43 218 aa26.16■■□□□ 1.78
UBXN1-212ENST00000531625 RBM42Q9BTD8 480 aaKnown RBP26.16■■□□□ 1.78
UBXN1-212ENST00000531625 AMOTQ4VCS5 1084 aa26.15■■□□□ 1.78
UBXN1-212ENST00000531625 ARHGEF1Q92888 912 aaKnown RBP26.15■■□□□ 1.78
UBXN1-212ENST00000531625 C10orf71Q711Q0 1435 aa26.14■■□□□ 1.78
UBXN1-212ENST00000531625 RPS6KA4O75676 772 aa26.14■■□□□ 1.78
UBXN1-212ENST00000531625 IFFO2Q5TF58 517 aa26.14■■□□□ 1.78
UBXN1-212ENST00000531625 KIAA1551Q9HCM1 1747 aa26.14■■□□□ 1.77
UBXN1-212ENST00000531625 KIF3CO14782 793 aa26.13■■□□□ 1.77
UBXN1-212ENST00000531625 ZNF530Q6P9A1 599 aaPredicted RBP26.13■■□□□ 1.77
UBXN1-212ENST00000531625 COL5A3P25940 1745 aaPredicted RBP26.13■■□□□ 1.77
UBXN1-212ENST00000531625 KDM6AO15550 1401 aaPredicted RBP26.13■■□□□ 1.77
UBXN1-212ENST00000531625 GYS1P13807 737 aa26.12■■□□□ 1.77
UBXN1-212ENST00000531625 CABP4P57796 275 aa26.12■■□□□ 1.77
UBXN1-212ENST00000531625 PANK3Q9H999 370 aa26.12■■□□□ 1.77
UBXN1-212ENST00000531625 A0A0G2JLW4 131 aa26.11■■□□□ 1.77
UBXN1-212ENST00000531625 RFC4P35249 363 aa26.11■■□□□ 1.77
UBXN1-212ENST00000531625 CCDC87Q9NVE4 849 aa26.11■■□□□ 1.77
UBXN1-212ENST00000531625 MYH14Q7Z406 1995 aaKnown RBP26.1■■□□□ 1.77
UBXN1-212ENST00000531625 BCS1LQ9Y276 419 aa26.1■■□□□ 1.77
UBXN1-212ENST00000531625 EIF4G2P78344 907 aaKnown RBP eCLIP26.09■■□□□ 1.77
UBXN1-212ENST00000531625 N4BP2Q86UW6 1770 aaPredicted RBP26.09■■□□□ 1.77
UBXN1-212ENST00000531625 C4AP0C0L4 1744 aa26.08■■□□□ 1.77
UBXN1-212ENST00000531625 MTHFSP49914 203 aa26.08■■□□□ 1.77
UBXN1-212ENST00000531625 PARP3Q9Y6F1 533 aa26.08■■□□□ 1.77
UBXN1-212ENST00000531625 DPEP1P16444 411 aa26.07■■□□□ 1.76
UBXN1-212ENST00000531625 C1orf141Q5JVX7 400 aa26.06■■□□□ 1.76
UBXN1-212ENST00000531625 AEBP1Q8IUX7 1158 aa26.06■■□□□ 1.76
UBXN1-212ENST00000531625 PTCD1O75127 700 aaKnown RBP26.05■■□□□ 1.76
UBXN1-212ENST00000531625 HSPA5P11021 654 aaKnown RBP26.05■■□□□ 1.76
UBXN1-212ENST00000531625 ARHGAP27Q6ZUM4 889 aa26.04■■□□□ 1.76
UBXN1-212ENST00000531625 MORC1Q86VD1 984 aa26.04■■□□□ 1.76
UBXN1-212ENST00000531625 NFATC2IPQ8NCF5 419 aa26.04■■□□□ 1.76
UBXN1-212ENST00000531625 BRCA1P38398 1863 aaKnown RBP26.03■■□□□ 1.76
UBXN1-212ENST00000531625 FCHSD2O94868 740 aa26.03■■□□□ 1.76
UBXN1-212ENST00000531625 CRKLP46109 303 aaKnown RBP26.03■■□□□ 1.76
UBXN1-212ENST00000531625 KCNA3P22001 575 aa26.02■■□□□ 1.76
UBXN1-212ENST00000531625 TOMM70O94826 608 aa26.01■■□□□ 1.75
UBXN1-212ENST00000531625 SULT6B1Q6IMI4 303 aa26.01■■□□□ 1.75
UBXN1-212ENST00000531625 USP42Q9H9J4 1324 aaKnown RBP26■■□□□ 1.75
UBXN1-212ENST00000531625 IL13P35225 146 aa25.99■■□□□ 1.75
UBXN1-212ENST00000531625 APLP1P51693 650 aa25.99■■□□□ 1.75
UBXN1-212ENST00000531625 PIM2Q9P1W9 311 aa25.99■■□□□ 1.75
UBXN1-212ENST00000531625 ARFGEF1Q9Y6D6 1849 aa25.98■■□□□ 1.75
UBXN1-212ENST00000531625 FKBP8Q14318 412 aa25.98■■□□□ 1.75
UBXN1-212ENST00000531625 SRP68Q9UHB9 627 aaKnown RBP25.98■■□□□ 1.75
UBXN1-212ENST00000531625 KNSTRNQ9Y448 316 aa25.97■■□□□ 1.75
UBXN1-212ENST00000531625 DDR1Q08345 913 aa25.96■■□□□ 1.75
UBXN1-212ENST00000531625 INTS5Q6P9B9 1019 aaKnown RBP25.96■■□□□ 1.75
UBXN1-212ENST00000531625 SCN11AQ9UI33 1791 aa25.96■■□□□ 1.75
UBXN1-212ENST00000531625 TJP1Q07157 1748 aa25.96■■□□□ 1.75
UBXN1-212ENST00000531625 DALRD3Q5D0E6 543 aaKnown RBP25.95■■□□□ 1.74
UBXN1-212ENST00000531625 AKAP4Q5JQC9 854 aa25.95■■□□□ 1.74
UBXN1-212ENST00000531625 C9orf131Q5VYM1 1079 aa25.95■■□□□ 1.74
UBXN1-212ENST00000531625 NMRK2Q9NPI5 230 aa25.95■■□□□ 1.74
UBXN1-212ENST00000531625 TM4SF1P30408 202 aa25.93■■□□□ 1.74
UBXN1-212ENST00000531625 SLC52A2Q9HAB3 445 aa25.93■■□□□ 1.74
UBXN1-212ENST00000531625 ADAMTS7Q9UKP4 1686 aa25.92■■□□□ 1.74
UBXN1-212ENST00000531625 POLRMTO00411 1230 aaKnown RBP25.91■■□□□ 1.74
UBXN1-212ENST00000531625 DNAJC5GQ8N7S2 189 aa25.91■■□□□ 1.74
UBXN1-212ENST00000531625 ZPR1O75312 459 aa25.9■■□□□ 1.74
UBXN1-212ENST00000531625 AMER1Q5JTC6 1135 aaPredicted RBP25.9■■□□□ 1.74
UBXN1-212ENST00000531625 DNAJC10Q8IXB1 793 aa25.9■■□□□ 1.74
UBXN1-212ENST00000531625 RBM46Q8TBY0 533 aaKnown RBP25.9■■□□□ 1.74
UBXN1-212ENST00000531625 SOS1Q07889 1333 aaPredicted RBP25.89■■□□□ 1.74
UBXN1-212ENST00000531625 LGR6Q9HBX8 967 aa25.89■■□□□ 1.74
UBXN1-212ENST00000531625 MRC1P22897 1456 aa25.88■■□□□ 1.73
UBXN1-212ENST00000531625 CHRNA5P30532 468 aa25.88■■□□□ 1.73
UBXN1-212ENST00000531625 RNMTO43148 476 aaKnown RBP25.87■■□□□ 1.73
UBXN1-212ENST00000531625 CYP19A1P11511 503 aaPredicted RBP25.87■■□□□ 1.73
UBXN1-212ENST00000531625 USPL1Q5W0Q7 1092 aa25.87■■□□□ 1.73
UBXN1-212ENST00000531625 RNF181Q9P0P0 153 aa25.86■■□□□ 1.73
UBXN1-212ENST00000531625 KDM2BQ8NHM5 1336 aa25.86■■□□□ 1.73
UBXN1-212ENST00000531625 ZEB1P37275 1124 aaPredicted RBP25.85■■□□□ 1.73
UBXN1-212ENST00000531625 NARFQ9UHQ1 456 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms