RNA–Protein interactions for RNA: ENST00000531607.5

CHEK1-212, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-212ENST00000531607 SSFA2P28290 1259 aa14.74□□□□□ -0.05
CHEK1-212ENST00000531607 MYH14Q7Z406 1995 aaKnown RBP14.74□□□□□ -0.05
CHEK1-212ENST00000531607 PIGBQ92521 554 aa14.73□□□□□ -0.05
CHEK1-212ENST00000531607 SBF1O95248 1867 aa14.72□□□□□ -0.05
CHEK1-212ENST00000531607 PXDNLA1KZ92 1463 aa14.72□□□□□ -0.05
CHEK1-212ENST00000531607 LOC102724428A0A0B4J2F2 783 aa14.72□□□□□ -0.05
CHEK1-212ENST00000531607 GNPATO15228 680 aa14.72□□□□□ -0.05
CHEK1-212ENST00000531607 PPM1GO15355 546 aaPredicted RBP14.72□□□□□ -0.05
CHEK1-212ENST00000531607 SIK1P57059 783 aa14.72□□□□□ -0.05
CHEK1-212ENST00000531607 LINC00116Q8NCU8 138 aa14.72□□□□□ -0.05
CHEK1-212ENST00000531607 TMOD3Q9NYL9 352 aa14.72□□□□□ -0.05
CHEK1-212ENST00000531607 SPG7Q9UQ90 795 aa14.72□□□□□ -0.05
CHEK1-212ENST00000531607 EMILIN1Q9Y6C2 1016 aa14.72□□□□□ -0.05
CHEK1-212ENST00000531607 TNRC6CQ9HCJ0 1690 aaKnown RBP14.71□□□□□ -0.05
CHEK1-212ENST00000531607 CCDC88AQ3V6T2 1871 aa14.7□□□□□ -0.06
CHEK1-212ENST00000531607 SCN11AQ9UI33 1791 aa14.7□□□□□ -0.06
CHEK1-212ENST00000531607 TJP1Q07157 1748 aa14.69□□□□□ -0.06
CHEK1-212ENST00000531607 NKX1-1Q15270 411 aaPredicted RBP14.69□□□□□ -0.06
CHEK1-212ENST00000531607 CDCA8Q53HL2 280 aa14.69□□□□□ -0.06
CHEK1-212ENST00000531607 C10orf71Q711Q0 1435 aa14.68□□□□□ -0.06
CHEK1-212ENST00000531607 KIF3CO14782 793 aa14.68□□□□□ -0.06
CHEK1-212ENST00000531607 MMP10P09238 476 aa14.68□□□□□ -0.06
CHEK1-212ENST00000531607 ATP6V1AP38606 617 aa14.68□□□□□ -0.06
CHEK1-212ENST00000531607 ITPK1Q13572 414 aa14.68□□□□□ -0.06
CHEK1-212ENST00000531607 ASAP1Q9ULH1 1129 aa14.68□□□□□ -0.06
CHEK1-212ENST00000531607 KDRP35968 1356 aa14.67□□□□□ -0.06
CHEK1-212ENST00000531607 DLEC1Q9Y238 1755 aa14.67□□□□□ -0.06
CHEK1-212ENST00000531607 AFDNP55196 1824 aaKnown RBP14.66□□□□□ -0.06
CHEK1-212ENST00000531607 PCNTO95613 3336 aa14.66□□□□□ -0.06
CHEK1-212ENST00000531607 TIAM2Q8IVF5 1701 aa14.66□□□□□ -0.06
CHEK1-212ENST00000531607 PHKG2P15735 406 aa14.65□□□□□ -0.06
CHEK1-212ENST00000531607 IFNL2Q8IZJ0 200 aa14.65□□□□□ -0.06
CHEK1-212ENST00000531607 EYA1Q99502 592 aa14.65□□□□□ -0.06
CHEK1-212ENST00000531607 CARD14Q9BXL6 1004 aa14.65□□□□□ -0.06
CHEK1-212ENST00000531607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.65□□□□□ -0.064e-6■■□□□ 11.5
CHEK1-212ENST00000531607 BCS1LQ9Y276 419 aa14.65□□□□□ -0.06
CHEK1-212ENST00000531607 WASHC2AQ641Q2 1341 aa14.65□□□□□ -0.06
CHEK1-212ENST00000531607 APLP1P51693 650 aa14.64□□□□□ -0.07
CHEK1-212ENST00000531607 ATG3Q9NT62 314 aa14.64□□□□□ -0.07
CHEK1-212ENST00000531607 RTCBQ9Y3I0 505 aaKnown RBP14.64□□□□□ -0.07
CHEK1-212ENST00000531607 ADAMTS7Q9UKP4 1686 aa14.63□□□□□ -0.07
CHEK1-212ENST00000531607 PLEKHG2Q9H7P9 1386 aa14.62□□□□□ -0.07
CHEK1-212ENST00000531607 A0A0G2JLW4 131 aa14.62□□□□□ -0.07
CHEK1-212ENST00000531607 TGFB2P61812 414 aa14.62□□□□□ -0.07
CHEK1-212ENST00000531607 CACNA1SQ13698 1873 aa14.62□□□□□ -0.07
CHEK1-212ENST00000531607 TRAPPC3LQ5T215 181 aa14.62□□□□□ -0.07
CHEK1-212ENST00000531607 TOMM70O94826 608 aa14.61□□□□□ -0.07
CHEK1-212ENST00000531607 ARHGAP27Q6ZUM4 889 aa14.61□□□□□ -0.07
CHEK1-212ENST00000531607 NLGN1Q8N2Q7 840 aa14.61□□□□□ -0.07
CHEK1-212ENST00000531607 RBM42Q9BTD8 480 aaKnown RBP14.61□□□□□ -0.07
CHEK1-212ENST00000531607 CCDC87Q9NVE4 849 aa14.61□□□□□ -0.07
CHEK1-212ENST00000531607 KDM6AO15550 1401 aaPredicted RBP14.6□□□□□ -0.07
CHEK1-212ENST00000531607 FCHSD2O94868 740 aa14.6□□□□□ -0.07
CHEK1-212ENST00000531607 NMRK2Q9NPI5 230 aa14.6□□□□□ -0.07
CHEK1-212ENST00000531607 CNTNAP4Q9C0A0 1308 aa14.6□□□□□ -0.07
CHEK1-212ENST00000531607 DPEP1P16444 411 aa14.59□□□□□ -0.07
CHEK1-212ENST00000531607 RFC4P35249 363 aa14.59□□□□□ -0.07
CHEK1-212ENST00000531607 TNNT2P45379 298 aaPredicted RBP14.59□□□□□ -0.07
CHEK1-212ENST00000531607 EIF4A2Q14240 407 aaKnown RBP14.59□□□□□ -0.07
CHEK1-212ENST00000531607 POLKQ9UBT6 870 aa14.59□□□□□ -0.07
CHEK1-212ENST00000531607 PARP3Q9Y6F1 533 aa14.59□□□□□ -0.07
CHEK1-212ENST00000531607 KCPQ6ZWJ8 1503 aa14.59□□□□□ -0.07
CHEK1-212ENST00000531607 GYS1P13807 737 aa14.58□□□□□ -0.08
CHEK1-212ENST00000531607 ARHGEF1Q92888 912 aaKnown RBP14.58□□□□□ -0.08
CHEK1-212ENST00000531607 SLC4A9Q96Q91 983 aa14.58□□□□□ -0.08
CHEK1-212ENST00000531607 DICER1Q9UPY3 1922 aaKnown RBP14.58□□□□□ -0.08
CHEK1-212ENST00000531607 NRXN2Q9P2S2 1712 aa14.58□□□□□ -0.08
CHEK1-212ENST00000531607 ERVV-2B6SEH9 535 aa14.57□□□□□ -0.08
CHEK1-212ENST00000531607 HSP90AB1P08238 724 aaKnown RBP14.57□□□□□ -0.08
CHEK1-212ENST00000531607 RC3H1Q5TC82 1133 aaKnown RBP14.57□□□□□ -0.08
CHEK1-212ENST00000531607 C16orf71Q8IYS4 520 aaPredicted RBP14.57□□□□□ -0.08
CHEK1-212ENST00000531607 DCAF5Q96JK2 942 aa14.56□□□□□ -0.08
CHEK1-212ENST00000531607 POLR3GLQ9BT43 218 aa14.56□□□□□ -0.08
CHEK1-212ENST00000531607 UBR2Q8IWV8 1755 aa14.55□□□□□ -0.08
CHEK1-212ENST00000531607 RPS6KA4O75676 772 aa14.55□□□□□ -0.08
CHEK1-212ENST00000531607 CABP4P57796 275 aa14.55□□□□□ -0.08
CHEK1-212ENST00000531607 C9orf131Q5VYM1 1079 aa14.55□□□□□ -0.08
CHEK1-212ENST00000531607 ZNF530Q6P9A1 599 aaPredicted RBP14.55□□□□□ -0.08
CHEK1-212ENST00000531607 PLEKHO1Q53GL0 409 aaPredicted RBP14.54□□□□□ -0.08
CHEK1-212ENST00000531607 DNAJC5GQ8N7S2 189 aa14.54□□□□□ -0.08
CHEK1-212ENST00000531607 RBM46Q8TBY0 533 aaKnown RBP14.54□□□□□ -0.08
CHEK1-212ENST00000531607 ANKRD31Q8N7Z5 1873 aa14.54□□□□□ -0.08
CHEK1-212ENST00000531607 KDM2BQ8NHM5 1336 aa14.53□□□□□ -0.08
CHEK1-212ENST00000531607 USP42Q9H9J4 1324 aaKnown RBP14.53□□□□□ -0.08
CHEK1-212ENST00000531607 PTCD1O75127 700 aaKnown RBP14.53□□□□□ -0.08
CHEK1-212ENST00000531607 PIM2Q9P1W9 311 aa14.53□□□□□ -0.08
CHEK1-212ENST00000531607 KCNA3P22001 575 aa14.52□□□□□ -0.09
CHEK1-212ENST00000531607 CRKLP46109 303 aaKnown RBP14.52□□□□□ -0.09
CHEK1-212ENST00000531607 DALRD3Q5D0E6 543 aaKnown RBP14.52□□□□□ -0.09
CHEK1-212ENST00000531607 C1orf141Q5JVX7 400 aa14.52□□□□□ -0.09
CHEK1-212ENST00000531607 RNF181Q9P0P0 153 aa14.52□□□□□ -0.09
CHEK1-212ENST00000531607 SRP68Q9UHB9 627 aaKnown RBP14.52□□□□□ -0.09
CHEK1-212ENST00000531607 COL11A2P13942 1736 aaPredicted RBP14.52□□□□□ -0.09
CHEK1-212ENST00000531607 SCN7AQ01118 1682 aa14.52□□□□□ -0.09
CHEK1-212ENST00000531607 MTHFSP49914 203 aa14.51□□□□□ -0.09
CHEK1-212ENST00000531607 HTRA3P83110 453 aa14.51□□□□□ -0.09
CHEK1-212ENST00000531607 DDR1Q08345 913 aa14.51□□□□□ -0.09
CHEK1-212ENST00000531607 FKBP8Q14318 412 aa14.51□□□□□ -0.09
CHEK1-212ENST00000531607 AMOTQ4VCS5 1084 aa14.51□□□□□ -0.09
CHEK1-212ENST00000531607 FER1L6Q2WGJ9 1857 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms