RNA–Protein interactions for RNA: ENST00000531523.1

SNHG9-201, Transcript of small nucleolar RNA host gene 9, humanhuman

TSL 1 (best) BASIC

Gene SNHG9, Length 275 nt, Biotype lincRNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG9-201ENST00000531523 SLC4A9Q96Q91 983 aa20.4■□□□□ 0.86
SNHG9-201ENST00000531523 ADAMTS7Q9UKP4 1686 aa20.4■□□□□ 0.86
SNHG9-201ENST00000531523 C4AP0C0L4 1744 aa20.39■□□□□ 0.86
SNHG9-201ENST00000531523 MYH14Q7Z406 1995 aaKnown RBP20.39■□□□□ 0.85
SNHG9-201ENST00000531523 COL3A1P02461 1466 aaPredicted RBP20.38■□□□□ 0.85
SNHG9-201ENST00000531523 MSH5O43196 834 aa20.38■□□□□ 0.85
SNHG9-201ENST00000531523 ZNF530Q6P9A1 599 aaPredicted RBP20.38■□□□□ 0.85
SNHG9-201ENST00000531523 FLAD1Q8NFF5 587 aa20.38■□□□□ 0.85
SNHG9-201ENST00000531523 DCAF5Q96JK2 942 aa20.38■□□□□ 0.85
SNHG9-201ENST00000531523 AK7Q96M32 723 aa20.38■□□□□ 0.85
SNHG9-201ENST00000531523 ERVV-2B6SEH9 535 aa20.37■□□□□ 0.85
SNHG9-201ENST00000531523 PLEKHO1Q53GL0 409 aaPredicted RBP20.37■□□□□ 0.85
SNHG9-201ENST00000531523 KLHL34Q8N239 644 aa20.37■□□□□ 0.85
SNHG9-201ENST00000531523 MRC1P22897 1456 aa20.37■□□□□ 0.85
SNHG9-201ENST00000531523 KIAA1551Q9HCM1 1747 aa20.36■□□□□ 0.85
SNHG9-201ENST00000531523 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.36■□□□□ 0.85
SNHG9-201ENST00000531523 HMGB2P26583 209 aaKnown RBP20.36■□□□□ 0.85
SNHG9-201ENST00000531523 SSFA2P28290 1259 aa20.36■□□□□ 0.85
SNHG9-201ENST00000531523 AMOTQ4VCS5 1084 aa20.36■□□□□ 0.85
SNHG9-201ENST00000531523 SULT6B1Q6IMI4 303 aa20.36■□□□□ 0.85
SNHG9-201ENST00000531523 KIF13BQ9NQT8 1826 aa20.35■□□□□ 0.85
SNHG9-201ENST00000531523 PHF14O94880 888 aa20.35■□□□□ 0.85
SNHG9-201ENST00000531523 HSP90AB1P08238 724 aaKnown RBP20.35■□□□□ 0.85
SNHG9-201ENST00000531523 NPC1L1Q9UHC9 1359 aa20.34■□□□□ 0.85
SNHG9-201ENST00000531523 ATP6V1AP38606 617 aa20.34■□□□□ 0.85
SNHG9-201ENST00000531523 MTHFSP49914 203 aa20.34■□□□□ 0.85
SNHG9-201ENST00000531523 ZNF784Q8NCA9 323 aaPredicted RBP20.33■□□□□ 0.85
SNHG9-201ENST00000531523 GNPATO15228 680 aa20.32■□□□□ 0.84
SNHG9-201ENST00000531523 YBX3P16989 372 aaKnown RBP eCLIP20.32■□□□□ 0.84
SNHG9-201ENST00000531523 GPR162Q16538 588 aa20.31■□□□□ 0.84
SNHG9-201ENST00000531523 CC2D1BQ5T0F9 858 aaKnown RBP20.3■□□□□ 0.84
SNHG9-201ENST00000531523 CD2APQ9Y5K6 639 aa20.3■□□□□ 0.84
SNHG9-201ENST00000531523 CNTNAP4Q9C0A0 1308 aa20.29■□□□□ 0.84
SNHG9-201ENST00000531523 UBR2Q8IWV8 1755 aa20.29■□□□□ 0.84
SNHG9-201ENST00000531523 CABP4P57796 275 aa20.29■□□□□ 0.84
SNHG9-201ENST00000531523 C1orf141Q5JVX7 400 aa20.28■□□□□ 0.84
SNHG9-201ENST00000531523 SIPA1L3O60292 1781 aaPredicted RBP20.28■□□□□ 0.84
SNHG9-201ENST00000531523 KCPQ6ZWJ8 1503 aa20.27■□□□□ 0.84
SNHG9-201ENST00000531523 RC3H1Q5TC82 1133 aaKnown RBP20.27■□□□□ 0.84
SNHG9-201ENST00000531523 RBM42Q9BTD8 480 aaKnown RBP20.27■□□□□ 0.84
SNHG9-201ENST00000531523 HMOX1P09601 288 aa20.26■□□□□ 0.83
SNHG9-201ENST00000531523 AKAP4Q5JQC9 854 aa20.26■□□□□ 0.83
SNHG9-201ENST00000531523 PELP1Q8IZL8 1130 aaKnown RBP20.26■□□□□ 0.83
SNHG9-201ENST00000531523 NFATC2IPQ8NCF5 419 aa20.26■□□□□ 0.83
SNHG9-201ENST00000531523 BRCA1P38398 1863 aaKnown RBP20.26■□□□□ 0.83
SNHG9-201ENST00000531523 N4BP2Q86UW6 1770 aaPredicted RBP20.26■□□□□ 0.83
SNHG9-201ENST00000531523 LGR6Q9HBX8 967 aa20.24■□□□□ 0.83
SNHG9-201ENST00000531523 DIAPH1O60610 1272 aaKnown RBP20.23■□□□□ 0.83
SNHG9-201ENST00000531523 RTCBQ9Y3I0 505 aaKnown RBP20.23■□□□□ 0.83
SNHG9-201ENST00000531523 C10orf71Q711Q0 1435 aa20.22■□□□□ 0.83
SNHG9-201ENST00000531523 RNMTO43148 476 aaKnown RBP20.22■□□□□ 0.83
SNHG9-201ENST00000531523 PTCD1O75127 700 aaKnown RBP20.22■□□□□ 0.83
SNHG9-201ENST00000531523 RPS6KA4O75676 772 aa20.22■□□□□ 0.83
SNHG9-201ENST00000531523 ADRA2BP18089 450 aa20.22■□□□□ 0.83
SNHG9-201ENST00000531523 MTHFSDQ2M296 383 aaKnown RBP20.22■□□□□ 0.83
SNHG9-201ENST00000531523 ARHGEF1Q92888 912 aaKnown RBP20.22■□□□□ 0.83
SNHG9-201ENST00000531523 SLC52A2Q9HAB3 445 aa20.22■□□□□ 0.83
SNHG9-201ENST00000531523 PXDNLA1KZ92 1463 aa20.22■□□□□ 0.83
SNHG9-201ENST00000531523 MMP10P09238 476 aa20.21■□□□□ 0.83
SNHG9-201ENST00000531523 GYS1P13807 737 aa20.2■□□□□ 0.82
SNHG9-201ENST00000531523 CRKLP46109 303 aaKnown RBP20.2■□□□□ 0.82
SNHG9-201ENST00000531523 TRAPPC3LQ5T215 181 aa20.2■□□□□ 0.82
SNHG9-201ENST00000531523 GRIN3BO60391 1043 aa20.19■□□□□ 0.82
SNHG9-201ENST00000531523 ADCY9O60503 1353 aa20.18■□□□□ 0.82
SNHG9-201ENST00000531523 SLC39A6Q13433 755 aa20.17■□□□□ 0.82
SNHG9-201ENST00000531523 INTS5Q6P9B9 1019 aaKnown RBP20.17■□□□□ 0.82
SNHG9-201ENST00000531523 CNGB1Q14028 1251 aaPredicted RBP20.16■□□□□ 0.82
SNHG9-201ENST00000531523 DNAJC10Q8IXB1 793 aa20.16■□□□□ 0.82
SNHG9-201ENST00000531523 USP42Q9H9J4 1324 aaKnown RBP20.16■□□□□ 0.82
SNHG9-201ENST00000531523 NLGN1Q8N2Q7 840 aa20.15■□□□□ 0.82
SNHG9-201ENST00000531523 SRP68Q9UHB9 627 aaKnown RBP20.15■□□□□ 0.82
SNHG9-201ENST00000531523 NRXN2Q9P2S2 1712 aa20.15■□□□□ 0.82
SNHG9-201ENST00000531523 AFDNP55196 1824 aaKnown RBP20.14■□□□□ 0.81
SNHG9-201ENST00000531523 ARFGEF1Q9Y6D6 1849 aa20.14■□□□□ 0.81
SNHG9-201ENST00000531523 RFC4P35249 363 aa20.14■□□□□ 0.81
SNHG9-201ENST00000531523 WWC3Q9ULE0 1092 aa20.14■□□□□ 0.81
SNHG9-201ENST00000531523 SOS1Q07889 1333 aaPredicted RBP20.13■□□□□ 0.81
SNHG9-201ENST00000531523 ATP10DQ9P241 1426 aa20.12■□□□□ 0.81
SNHG9-201ENST00000531523 CYP19A1P11511 503 aaPredicted RBP20.12■□□□□ 0.81
SNHG9-201ENST00000531523 CEMIPQ8WUJ3 1361 aa20.11■□□□□ 0.81
SNHG9-201ENST00000531523 SCN7AQ01118 1682 aa20.11■□□□□ 0.81
SNHG9-201ENST00000531523 U2SURPO15042 1029 aaKnown RBP20.11■□□□□ 0.81
SNHG9-201ENST00000531523 DDR1Q08345 913 aa20.11■□□□□ 0.81
SNHG9-201ENST00000531523 FKBP8Q14318 412 aa20.11■□□□□ 0.81
SNHG9-201ENST00000531523 IL17REQ8NFR9 667 aa20.11■□□□□ 0.81
SNHG9-201ENST00000531523 RSPH6AQ9H0K4 717 aa20.11■□□□□ 0.81
SNHG9-201ENST00000531523 CCDC87Q9NVE4 849 aa20.11■□□□□ 0.81
SNHG9-201ENST00000531523 DLEC1Q9Y238 1755 aa20.09■□□□□ 0.81
SNHG9-201ENST00000531523 PPP2R1AP30153 589 aa20.09■□□□□ 0.81
SNHG9-201ENST00000531523 TGFB2P61812 414 aa20.09■□□□□ 0.81
SNHG9-201ENST00000531523 ZBTB1Q9Y2K1 713 aa20.09■□□□□ 0.81
SNHG9-201ENST00000531523 COL15A1P39059 1388 aa20.08■□□□□ 0.81
SNHG9-201ENST00000531523 C1QTNF8P60827 252 aa20.08■□□□□ 0.81
SNHG9-201ENST00000531523 VSIG10Q8N0Z9 540 aa20.08■□□□□ 0.81
SNHG9-201ENST00000531523 GAS2L2Q8NHY3 880 aa20.08■□□□□ 0.81
SNHG9-201ENST00000531523 PHACTR3Q96KR7 559 aa20.08■□□□□ 0.81
SNHG9-201ENST00000531523 GNAT3A8MTJ3 354 aa20.07■□□□□ 0.8
SNHG9-201ENST00000531523 KCNA3P22001 575 aa20.07■□□□□ 0.8
SNHG9-201ENST00000531523 PARP3Q9Y6F1 533 aa20.07■□□□□ 0.8
SNHG9-201ENST00000531523 BCORQ6W2J9 1755 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms