RNA–Protein interactions for RNA: ENST00000531339.5

SIPA1-207, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 5

Gene SIPA1, Length 799 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-207ENST00000531339 PHKG2P15735 406 aa23.72■■□□□ 1.39
SIPA1-207ENST00000531339 IL17REQ8NFR9 667 aa23.72■■□□□ 1.39
SIPA1-207ENST00000531339 PCDH11XQ9BZA7 1347 aa23.72■■□□□ 1.39
SIPA1-207ENST00000531339 PCDH11YQ9BZA8 1340 aa23.72■■□□□ 1.39
SIPA1-207ENST00000531339 WNK3Q9BYP7 1800 aa23.72■■□□□ 1.39
SIPA1-207ENST00000531339 CFAP44Q96MT7 982 aa23.71■■□□□ 1.39
SIPA1-207ENST00000531339 CEP350Q5VT06 3117 aa23.71■■□□□ 1.39
SIPA1-207ENST00000531339 CYP27B1O15528 508 aa23.7■■□□□ 1.38
SIPA1-207ENST00000531339 RNMTO43148 476 aaKnown RBP23.7■■□□□ 1.38
SIPA1-207ENST00000531339 ZNF853P0CG23 659 aa23.7■■□□□ 1.38
SIPA1-207ENST00000531339 FAM196AQ6ZSG2 479 aa23.7■■□□□ 1.38
SIPA1-207ENST00000531339 LAS1LQ9Y4W2 734 aaKnown RBP23.7■■□□□ 1.38
SIPA1-207ENST00000531339 CEMIPQ8WUJ3 1361 aa23.69■■□□□ 1.38
SIPA1-207ENST00000531339 MPRIPQ6WCQ1 1025 aa23.69■■□□□ 1.38
SIPA1-207ENST00000531339 LRRC37A3O60309 1634 aa23.69■■□□□ 1.38
SIPA1-207ENST00000531339 FANCIQ9NVI1 1328 aa23.68■■□□□ 1.38
SIPA1-207ENST00000531339 EXOC5O00471 708 aa23.68■■□□□ 1.38
SIPA1-207ENST00000531339 NBPF14Q5TI25 921 aa23.68■■□□□ 1.38
SIPA1-207ENST00000531339 LGR6Q9HBX8 967 aa23.68■■□□□ 1.38
SIPA1-207ENST00000531339 TSR2Q969E8 191 aaKnown RBP23.67■■□□□ 1.38
SIPA1-207ENST00000531339 DCAF5Q96JK2 942 aa23.67■■□□□ 1.38
SIPA1-207ENST00000531339 CHL1O00533 1208 aa23.66■■□□□ 1.38
SIPA1-207ENST00000531339 DDX54Q8TDD1 881 aaKnown RBP23.66■■□□□ 1.38
SIPA1-207ENST00000531339 ADAMTS7Q9UKP4 1686 aa23.66■■□□□ 1.38
SIPA1-207ENST00000531339 SHANK3Q9BYB0 1731 aa23.65■■□□□ 1.38
SIPA1-207ENST00000531339 TEFQ10587 303 aa23.65■■□□□ 1.38
SIPA1-207ENST00000531339 NKX1-1Q15270 411 aaPredicted RBP23.65■■□□□ 1.38
SIPA1-207ENST00000531339 TAF7Q15545 349 aaPredicted RBP23.65■■□□□ 1.38
SIPA1-207ENST00000531339 BABAM1Q9NWV8 329 aa23.65■■□□□ 1.38
SIPA1-207ENST00000531339 MBIPQ9NS73 344 aa23.64■■□□□ 1.37
SIPA1-207ENST00000531339 CASZ1Q86V15 1759 aa23.64■■□□□ 1.37
SIPA1-207ENST00000531339 TNS2Q63HR2 1409 aa23.64■■□□□ 1.37
SIPA1-207ENST00000531339 VIRMAQ69YN4 1812 aaKnown RBP23.63■■□□□ 1.37
SIPA1-207ENST00000531339 SCN11AQ9UI33 1791 aa23.63■■□□□ 1.37
SIPA1-207ENST00000531339 DDB1Q16531 1140 aa23.63■■□□□ 1.37
SIPA1-207ENST00000531339 CHD4Q14839 1912 aa23.63■■□□□ 1.37
SIPA1-207ENST00000531339 KDM6AO15550 1401 aaPredicted RBP23.62■■□□□ 1.37
SIPA1-207ENST00000531339 PDGFDQ9GZP0 370 aaPredicted RBP23.61■■□□□ 1.37
SIPA1-207ENST00000531339 TSPYL4Q9UJ04 414 aa23.61■■□□□ 1.37
SIPA1-207ENST00000531339 RCAN3Q9UKA8 241 aa23.61■■□□□ 1.37
SIPA1-207ENST00000531339 CT47B1P0C2W7 299 aaPredicted RBP23.6■■□□□ 1.37
SIPA1-207ENST00000531339 EXOSC9Q06265 439 aaKnown RBP23.6■■□□□ 1.37
SIPA1-207ENST00000531339 SLC52A2Q9HAB3 445 aa23.59■■□□□ 1.37
SIPA1-207ENST00000531339 MIS18AQ9NYP9 233 aa23.58■■□□□ 1.37
SIPA1-207ENST00000531339 MRC1P22897 1456 aa23.57■■□□□ 1.36
SIPA1-207ENST00000531339 ERVV-2B6SEH9 535 aa23.57■■□□□ 1.36
SIPA1-207ENST00000531339 CABP4P57796 275 aa23.56■■□□□ 1.36
SIPA1-207ENST00000531339 SIPA1L3O60292 1781 aaPredicted RBP23.55■■□□□ 1.36
SIPA1-207ENST00000531339 BTBD11A6QL63 1104 aa23.55■■□□□ 1.36
SIPA1-207ENST00000531339 ANO8Q9HCE9 1232 aaPredicted RBP23.55■■□□□ 1.36
SIPA1-207ENST00000531339 NFATC2IPQ8NCF5 419 aa23.54■■□□□ 1.36
SIPA1-207ENST00000531339 SUPT16HQ9Y5B9 1047 aaKnown RBP23.54■■□□□ 1.36
SIPA1-207ENST00000531339 PTGER2P43116 358 aa23.53■■□□□ 1.36
SIPA1-207ENST00000531339 C8orf58Q8NAV2 365 aa23.52■■□□□ 1.36
SIPA1-207ENST00000531339 ZNF428Q96B54 188 aa23.52■■□□□ 1.36
SIPA1-207ENST00000531339 KDM3BQ7LBC6 1761 aa23.52■■□□□ 1.36
SIPA1-207ENST00000531339 ZBTB7AO95365 584 aa23.51■■□□□ 1.35
SIPA1-207ENST00000531339 MARCH10Q8NA82 808 aaPredicted RBP23.51■■□□□ 1.35
SIPA1-207ENST00000531339 TWISTNBQ3B726 338 aaPredicted RBP23.5■■□□□ 1.35
SIPA1-207ENST00000531339 TSPYL6Q8N831 410 aa23.5■■□□□ 1.35
SIPA1-207ENST00000531339 VAMP4O75379 141 aa23.49■■□□□ 1.35
SIPA1-207ENST00000531339 RARSP54136 660 aaKnown RBP23.49■■□□□ 1.35
SIPA1-207ENST00000531339 SYT17Q9BSW7 474 aa23.49■■□□□ 1.35
SIPA1-207ENST00000531339 SOS1Q07889 1333 aaPredicted RBP23.49■■□□□ 1.35
SIPA1-207ENST00000531339 TOGARAM1Q9Y4F4 1720 aa23.48■■□□□ 1.35
SIPA1-207ENST00000531339 ELL2O00472 640 aaPredicted RBP23.48■■□□□ 1.35
SIPA1-207ENST00000531339 EIF4A1P60842 406 aaKnown RBP23.48■■□□□ 1.35
SIPA1-207ENST00000531339 FHDC1Q9C0D6 1143 aaPredicted RBP23.48■■□□□ 1.35
SIPA1-207ENST00000531339 TMOD3Q9NYL9 352 aa23.48■■□□□ 1.35
SIPA1-207ENST00000531339 RGPD3A6NKT7 1758 aaPredicted RBP23.47■■□□□ 1.35
SIPA1-207ENST00000531339 RGPD4Q7Z3J3 1758 aa23.47■■□□□ 1.35
SIPA1-207ENST00000531339 KCNQ3O43525 872 aa23.47■■□□□ 1.35
SIPA1-207ENST00000531339 ZNF790Q6PG37 636 aa23.47■■□□□ 1.35
SIPA1-207ENST00000531339 ATF5Q9Y2D1 282 aaPredicted RBP23.47■■□□□ 1.35
SIPA1-207ENST00000531339 RNF123Q5XPI4 1314 aa23.47■■□□□ 1.35
SIPA1-207ENST00000531339 KRT24Q2M2I5 525 aa23.46■■□□□ 1.35
SIPA1-207ENST00000531339 ALDH1L2Q3SY69 923 aa23.45■■□□□ 1.34
SIPA1-207ENST00000531339 TTC5Q8N0Z6 440 aa23.45■■□□□ 1.34
SIPA1-207ENST00000531339 SLC39A6Q13433 755 aa23.44■■□□□ 1.34
SIPA1-207ENST00000531339 SBF2Q86WG5 1849 aa23.44■■□□□ 1.34
SIPA1-207ENST00000531339 KAT6BQ8WYB5 2073 aa23.44■■□□□ 1.34
SIPA1-207ENST00000531339 ITGB4P16144 1822 aa23.43■■□□□ 1.34
SIPA1-207ENST00000531339 DOT1LQ8TEK3 1739 aa23.43■■□□□ 1.34
SIPA1-207ENST00000531339 BCAR3O75815 825 aa23.43■■□□□ 1.34
SIPA1-207ENST00000531339 HOXB7P09629 217 aa23.43■■□□□ 1.34
SIPA1-207ENST00000531339 RRP1P56182 461 aaKnown RBP23.43■■□□□ 1.34
SIPA1-207ENST00000531339 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.43■■□□□ 1.34
SIPA1-207ENST00000531339 CHMP4AQ9BY43 222 aa23.43■■□□□ 1.34
SIPA1-207ENST00000531339 NEFLP07196 543 aa23.42■■□□□ 1.34
SIPA1-207ENST00000531339 PRIM1P49642 420 aaKnown RBP23.42■■□□□ 1.34
SIPA1-207ENST00000531339 PTF1AQ7RTS3 328 aa23.42■■□□□ 1.34
SIPA1-207ENST00000531339 SSH1Q8WYL5 1049 aa23.42■■□□□ 1.34
SIPA1-207ENST00000531339 PIGBQ92521 554 aa23.42■■□□□ 1.34
SIPA1-207ENST00000531339 SMC4Q9NTJ3 1288 aa23.42■■□□□ 1.34
SIPA1-207ENST00000531339 BCL9O00512 1426 aa23.42■■□□□ 1.34
SIPA1-207ENST00000531339 HEG1Q9ULI3 1381 aa23.41■■□□□ 1.34
SIPA1-207ENST00000531339 GIGYF1O75420 1035 aaPredicted RBP23.41■■□□□ 1.34
SIPA1-207ENST00000531339 SYTL4Q96C24 671 aaPredicted RBP23.41■■□□□ 1.34
SIPA1-207ENST00000531339 GOLGB1Q14789 3259 aaKnown RBP23.41■■□□□ 1.34
SIPA1-207ENST00000531339 PROM2Q8N271 834 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms