RNA–Protein interactions for RNA: ENST00000530721.5

RPS3-216, Transcript of ribosomal protein S3, humanhuman

TSL 3

Gene RPS3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-216ENST00000530721 KDM6AO15550 1401 aaPredicted RBP17.42■□□□□ 0.38
RPS3-216ENST00000530721 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.42■□□□□ 0.38
RPS3-216ENST00000530721 SSFA2P28290 1259 aa17.42■□□□□ 0.38
RPS3-216ENST00000530721 GPR162Q16538 588 aa17.42■□□□□ 0.38
RPS3-216ENST00000530721 C1orf141Q5JVX7 400 aa17.42■□□□□ 0.38
RPS3-216ENST00000530721 AMIGO3Q86WK7 504 aa17.42■□□□□ 0.38
RPS3-216ENST00000530721 PHF14O94880 888 aa17.41■□□□□ 0.38
RPS3-216ENST00000530721 MTHFSP49914 203 aa17.41■□□□□ 0.38
RPS3-216ENST00000530721 ITPK1Q13572 414 aa17.41■□□□□ 0.38
RPS3-216ENST00000530721 NLGN2Q8NFZ4 835 aa17.41■□□□□ 0.38
RPS3-216ENST00000530721 CABP4P57796 275 aa17.4■□□□□ 0.38
RPS3-216ENST00000530721 CHD4Q14839 1912 aa17.4■□□□□ 0.38
RPS3-216ENST00000530721 GNPATO15228 680 aa17.39■□□□□ 0.37
RPS3-216ENST00000530721 CC2D1BQ5T0F9 858 aaKnown RBP17.39■□□□□ 0.37
RPS3-216ENST00000530721 GOLGB1Q14789 3259 aaKnown RBP17.39■□□□□ 0.37
RPS3-216ENST00000530721 SMIM5Q71RC9 77 aa17.38■□□□□ 0.37
RPS3-216ENST00000530721 PELP1Q8IZL8 1130 aaKnown RBP17.38■□□□□ 0.37
RPS3-216ENST00000530721 RBM42Q9BTD8 480 aaKnown RBP17.38■□□□□ 0.37
RPS3-216ENST00000530721 ZNF831Q5JPB2 1677 aa17.38■□□□□ 0.37
RPS3-216ENST00000530721 NPC1L1Q9UHC9 1359 aa17.38■□□□□ 0.37
RPS3-216ENST00000530721 CD2APQ9Y5K6 639 aa17.37■□□□□ 0.37
RPS3-216ENST00000530721 SLC4A9Q96Q91 983 aa17.36■□□□□ 0.37
RPS3-216ENST00000530721 DIAPH1O60610 1272 aaKnown RBP17.35■□□□□ 0.37
RPS3-216ENST00000530721 AKAP4Q5JQC9 854 aa17.35■□□□□ 0.37
RPS3-216ENST00000530721 ZNF784Q8NCA9 323 aaPredicted RBP17.35■□□□□ 0.37
RPS3-216ENST00000530721 NFATC2IPQ8NCF5 419 aa17.35■□□□□ 0.37
RPS3-216ENST00000530721 RTCBQ9Y3I0 505 aaKnown RBP17.35■□□□□ 0.37
RPS3-216ENST00000530721 HMOX1P09601 288 aa17.34■□□□□ 0.37
RPS3-216ENST00000530721 RC3H1Q5TC82 1133 aaKnown RBP17.34■□□□□ 0.37
RPS3-216ENST00000530721 CNTNAP4Q9C0A0 1308 aa17.34■□□□□ 0.37
RPS3-216ENST00000530721 SCN11AQ9UI33 1791 aa17.33■□□□□ 0.37
RPS3-216ENST00000530721 COL5A3P25940 1745 aaPredicted RBP17.33■□□□□ 0.37
RPS3-216ENST00000530721 TRAPPC3LQ5T215 181 aa17.33■□□□□ 0.36
RPS3-216ENST00000530721 GRIN3BO60391 1043 aa17.32■□□□□ 0.36
RPS3-216ENST00000530721 PTCD1O75127 700 aaKnown RBP17.32■□□□□ 0.36
RPS3-216ENST00000530721 YBX3P16989 372 aaKnown RBP eCLIP17.32■□□□□ 0.366e-77■□□□□ 9.7
RPS3-216ENST00000530721 ADRA2BP18089 450 aa17.32■□□□□ 0.36
RPS3-216ENST00000530721 RPS6KA4O75676 772 aa17.3■□□□□ 0.36
RPS3-216ENST00000530721 CNGB1Q14028 1251 aaPredicted RBP17.3■□□□□ 0.36
RPS3-216ENST00000530721 SLC52A2Q9HAB3 445 aa17.3■□□□□ 0.36
RPS3-216ENST00000530721 COL3A1P02461 1466 aaPredicted RBP17.3■□□□□ 0.36
RPS3-216ENST00000530721 RNMTO43148 476 aaKnown RBP17.29■□□□□ 0.36
RPS3-216ENST00000530721 MTHFSDQ2M296 383 aaKnown RBP17.29■□□□□ 0.36
RPS3-216ENST00000530721 ARHGEF1Q92888 912 aaKnown RBP17.29■□□□□ 0.36
RPS3-216ENST00000530721 LGR6Q9HBX8 967 aa17.29■□□□□ 0.36
RPS3-216ENST00000530721 MRC1P22897 1456 aa17.29■□□□□ 0.36
RPS3-216ENST00000530721 MYH14Q7Z406 1995 aaKnown RBP17.28■□□□□ 0.36
RPS3-216ENST00000530721 MMP10P09238 476 aa17.28■□□□□ 0.36
RPS3-216ENST00000530721 RFC4P35249 363 aa17.28■□□□□ 0.36
RPS3-216ENST00000530721 NLGN1Q8N2Q7 840 aa17.28■□□□□ 0.36
RPS3-216ENST00000530721 CICQ96RK0 1608 aaPredicted RBP17.28■□□□□ 0.36
RPS3-216ENST00000530721 CRKLP46109 303 aaKnown RBP17.27■□□□□ 0.36
RPS3-216ENST00000530721 U2SURPO15042 1029 aaKnown RBP17.26■□□□□ 0.35
RPS3-216ENST00000530721 TJP1Q07157 1748 aa17.26■□□□□ 0.35
RPS3-216ENST00000530721 ADAMTS7Q9UKP4 1686 aa17.26■□□□□ 0.35
RPS3-216ENST00000530721 VIRMAQ69YN4 1812 aaKnown RBP17.26■□□□□ 0.35
RPS3-216ENST00000530721 GYS1P13807 737 aa17.25■□□□□ 0.35
RPS3-216ENST00000530721 C4AP0C0L4 1744 aa17.24■□□□□ 0.35
RPS3-216ENST00000530721 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
RPS3-216ENST00000530721 SLC39A6Q13433 755 aa17.23■□□□□ 0.35
RPS3-216ENST00000530721 GAS2L2Q8NHY3 880 aa17.23■□□□□ 0.35
RPS3-216ENST00000530721 KIF13BQ9NQT8 1826 aa17.22■□□□□ 0.35
RPS3-216ENST00000530721 INTS5Q6P9B9 1019 aaKnown RBP17.22■□□□□ 0.35
RPS3-216ENST00000530721 DNAJC10Q8IXB1 793 aa17.22■□□□□ 0.35
RPS3-216ENST00000530721 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.35
RPS3-216ENST00000530721 KCPQ6ZWJ8 1503 aa17.21■□□□□ 0.35
RPS3-216ENST00000530721 TGFB2P61812 414 aa17.21■□□□□ 0.35
RPS3-216ENST00000530721 CCDC87Q9NVE4 849 aa17.21■□□□□ 0.35
RPS3-216ENST00000530721 WWC3Q9ULE0 1092 aa17.21■□□□□ 0.35
RPS3-216ENST00000530721 PARP3Q9Y6F1 533 aa17.21■□□□□ 0.35
RPS3-216ENST00000530721 C10orf71Q711Q0 1435 aa17.21■□□□□ 0.34
RPS3-216ENST00000530721 PXDNLA1KZ92 1463 aa17.2■□□□□ 0.34
RPS3-216ENST00000530721 GNAT3A8MTJ3 354 aa17.2■□□□□ 0.34
RPS3-216ENST00000530721 CYP19A1P11511 503 aaPredicted RBP17.2■□□□□ 0.34
RPS3-216ENST00000530721 VSIG10Q8N0Z9 540 aa17.2■□□□□ 0.34
RPS3-216ENST00000530721 SRP68Q9UHB9 627 aaKnown RBP17.2■□□□□ 0.34
RPS3-216ENST00000530721 PPP2R1AP30153 589 aa17.19■□□□□ 0.34
RPS3-216ENST00000530721 NUDCQ9Y266 331 aa17.19■□□□□ 0.34
RPS3-216ENST00000530721 TEFQ10587 303 aa17.18■□□□□ 0.34
RPS3-216ENST00000530721 FKBP8Q14318 412 aa17.18■□□□□ 0.34
RPS3-216ENST00000530721 TTC5Q8N0Z6 440 aa17.18■□□□□ 0.34
RPS3-216ENST00000530721 IL17REQ8NFR9 667 aa17.18■□□□□ 0.34
RPS3-216ENST00000530721 SOS1Q07889 1333 aaPredicted RBP17.18■□□□□ 0.34
RPS3-216ENST00000530721 UBR2Q8IWV8 1755 aa17.17■□□□□ 0.34
RPS3-216ENST00000530721 ZPR1O75312 459 aa17.17■□□□□ 0.34
RPS3-216ENST00000530721 PRKAR2BP31323 418 aa17.17■□□□□ 0.34
RPS3-216ENST00000530721 RSPH6AQ9H0K4 717 aa17.17■□□□□ 0.34
RPS3-216ENST00000530721 KIAA1551Q9HCM1 1747 aa17.17■□□□□ 0.34
RPS3-216ENST00000530721 N4BP2Q86UW6 1770 aaPredicted RBP17.16■□□□□ 0.34
RPS3-216ENST00000530721 A0A0G2JLW4 131 aa17.16■□□□□ 0.34
RPS3-216ENST00000530721 GIGYF1O75420 1035 aaPredicted RBP17.16■□□□□ 0.34
RPS3-216ENST00000530721 PHACTR3Q96KR7 559 aa17.16■□□□□ 0.34
RPS3-216ENST00000530721 ZBTB1Q9Y2K1 713 aa17.16■□□□□ 0.34
RPS3-216ENST00000530721 COL15A1P39059 1388 aa17.15■□□□□ 0.34
RPS3-216ENST00000530721 ATP10DQ9P241 1426 aa17.15■□□□□ 0.34
RPS3-216ENST00000530721 U2AF1L5P0DN76 240 aaPredicted RBP17.15■□□□□ 0.34
RPS3-216ENST00000530721 C1QTNF8P60827 252 aa17.15■□□□□ 0.34
RPS3-216ENST00000530721 U2AF1Q01081 240 aaKnown RBP eCLIP17.15■□□□□ 0.34
RPS3-216ENST00000530721 USPL1Q5W0Q7 1092 aa17.15■□□□□ 0.34
RPS3-216ENST00000530721 ZNF790Q6PG37 636 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms