RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 PLEKHO1Q53GL0 409 aaPredicted RBP18.8■□□□□ 0.6
CTSB-217ENST00000530296 PALLDQ8WX93 1383 aa18.79■□□□□ 0.6
CTSB-217ENST00000530296 PKD1L3Q7Z443 1732 aa18.77■□□□□ 0.6
CTSB-217ENST00000530296 TAF1LQ8IZX4 1826 aa18.77■□□□□ 0.6
CTSB-217ENST00000530296 YBX3P16989 372 aaKnown RBP eCLIP18.77■□□□□ 0.6
CTSB-217ENST00000530296 AK7Q96M32 723 aa18.77■□□□□ 0.6
CTSB-217ENST00000530296 U2AF1L5P0DN76 240 aaPredicted RBP18.76■□□□□ 0.59
CTSB-217ENST00000530296 U2AF1Q01081 240 aaKnown RBP eCLIP18.76■□□□□ 0.59
CTSB-217ENST00000530296 MPRIPQ6WCQ1 1025 aa18.76■□□□□ 0.59
CTSB-217ENST00000530296 AEBP1Q8IUX7 1158 aa18.76■□□□□ 0.59
CTSB-217ENST00000530296 HSP90AB1P08238 724 aaKnown RBP18.75■□□□□ 0.59
CTSB-217ENST00000530296 HMOX1P09601 288 aa18.75■□□□□ 0.59
CTSB-217ENST00000530296 IFNL2Q8IZJ0 200 aa18.75■□□□□ 0.59
CTSB-217ENST00000530296 PNNQ9H307 717 aaKnown RBP18.75■□□□□ 0.59
CTSB-217ENST00000530296 FCHSD2O94868 740 aa18.74■□□□□ 0.59
CTSB-217ENST00000530296 NEFMP07197 916 aa18.74■□□□□ 0.59
CTSB-217ENST00000530296 MSL1Q68DK7 614 aa18.74■□□□□ 0.59
CTSB-217ENST00000530296 CYP27B1O15528 508 aa18.73■□□□□ 0.59
CTSB-217ENST00000530296 SSFA2P28290 1259 aa18.73■□□□□ 0.59
CTSB-217ENST00000530296 NKX1-1Q15270 411 aaPredicted RBP18.73■□□□□ 0.59
CTSB-217ENST00000530296 C1orf141Q5JVX7 400 aa18.73■□□□□ 0.59
CTSB-217ENST00000530296 GPBP1L1Q9HC44 474 aaPredicted RBP18.73■□□□□ 0.59
CTSB-217ENST00000530296 C4BP0C0L5 1744 aa18.73■□□□□ 0.59
CTSB-217ENST00000530296 ITGB4P16144 1822 aa18.72■□□□□ 0.59
CTSB-217ENST00000530296 CEP350Q5VT06 3117 aa18.71■□□□□ 0.59
CTSB-217ENST00000530296 PHKG2P15735 406 aa18.71■□□□□ 0.59
CTSB-217ENST00000530296 ZNF530Q6P9A1 599 aaPredicted RBP18.71■□□□□ 0.59
CTSB-217ENST00000530296 ATP10DQ9P241 1426 aa18.71■□□□□ 0.59
CTSB-217ENST00000530296 WDR43Q15061 677 aaKnown RBP eCLIP18.69■□□□□ 0.58
CTSB-217ENST00000530296 GAS2L2Q8NHY3 880 aa18.69■□□□□ 0.58
CTSB-217ENST00000530296 PIGBQ92521 554 aa18.69■□□□□ 0.58
CTSB-217ENST00000530296 DCAF5Q96JK2 942 aa18.69■□□□□ 0.58
CTSB-217ENST00000530296 RSPH6AQ9H0K4 717 aa18.69■□□□□ 0.58
CTSB-217ENST00000530296 UBR3Q6ZT12 1888 aa18.69■□□□□ 0.58
CTSB-217ENST00000530296 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.68■□□□□ 0.58
CTSB-217ENST00000530296 LOC102724428A0A0B4J2F2 783 aa18.68■□□□□ 0.58
CTSB-217ENST00000530296 PRKAR2BP31323 418 aa18.68■□□□□ 0.58
CTSB-217ENST00000530296 SIK1P57059 783 aa18.68■□□□□ 0.58
CTSB-217ENST00000530296 AKAP4Q5JQC9 854 aa18.68■□□□□ 0.58
CTSB-217ENST00000530296 TMOD3Q9NYL9 352 aa18.68■□□□□ 0.58
CTSB-217ENST00000530296 ADCY9O60503 1353 aa18.68■□□□□ 0.58
CTSB-217ENST00000530296 IFFO2Q5TF58 517 aa18.67■□□□□ 0.58
CTSB-217ENST00000530296 TOGARAM1Q9Y4F4 1720 aa18.66■□□□□ 0.58
CTSB-217ENST00000530296 PHF14O94880 888 aa18.65■□□□□ 0.58
CTSB-217ENST00000530296 MTHFSDQ2M296 383 aaKnown RBP18.65■□□□□ 0.58
CTSB-217ENST00000530296 ERVV-2B6SEH9 535 aa18.64■□□□□ 0.57
CTSB-217ENST00000530296 MAPK8IP3Q9UPT6 1336 aa18.64■□□□□ 0.57
CTSB-217ENST00000530296 HSPA6P17066 643 aa18.63■□□□□ 0.57
CTSB-217ENST00000530296 ATP6V1AP38606 617 aa18.62■□□□□ 0.57
CTSB-217ENST00000530296 GNAT3A8MTJ3 354 aa18.61■□□□□ 0.57
CTSB-217ENST00000530296 GNPATO15228 680 aa18.61■□□□□ 0.57
CTSB-217ENST00000530296 TGFB2P61812 414 aa18.61■□□□□ 0.57
CTSB-217ENST00000530296 NLGN1Q8N2Q7 840 aa18.61■□□□□ 0.57
CTSB-217ENST00000530296 LINC00116Q8NCU8 138 aa18.61■□□□□ 0.57
CTSB-217ENST00000530296 ADRA2BP18089 450 aa18.6■□□□□ 0.57
CTSB-217ENST00000530296 CABP4P57796 275 aa18.6■□□□□ 0.57
CTSB-217ENST00000530296 PHACTR3Q96KR7 559 aa18.6■□□□□ 0.57
CTSB-217ENST00000530296 MRS2Q9HD23 443 aa18.6■□□□□ 0.57
CTSB-217ENST00000530296 RTCBQ9Y3I0 505 aaKnown RBP18.6■□□□□ 0.57
CTSB-217ENST00000530296 ZNF831Q5JPB2 1677 aa18.6■□□□□ 0.57
CTSB-217ENST00000530296 RTF1Q92541 710 aaKnown RBP18.59■□□□□ 0.57
CTSB-217ENST00000530296 PLEKHF1Q96S99 279 aa18.59■□□□□ 0.57
CTSB-217ENST00000530296 ASAP1Q9ULH1 1129 aa18.59■□□□□ 0.57
CTSB-217ENST00000530296 HTATSF1O43719 755 aaKnown RBP18.58■□□□□ 0.56
CTSB-217ENST00000530296 TRAPPC3LQ5T215 181 aa18.58■□□□□ 0.56
CTSB-217ENST00000530296 RC3H1Q5TC82 1133 aaKnown RBP18.58■□□□□ 0.56
CTSB-217ENST00000530296 AMIGO3Q86WK7 504 aa18.58■□□□□ 0.56
CTSB-217ENST00000530296 CICQ96RK0 1608 aaPredicted RBP18.58■□□□□ 0.56
CTSB-217ENST00000530296 KDM6AO15550 1401 aaPredicted RBP18.57■□□□□ 0.56
CTSB-217ENST00000530296 MMP10P09238 476 aa18.57■□□□□ 0.56
CTSB-217ENST00000530296 RUNDC1Q96C34 613 aa18.57■□□□□ 0.56
CTSB-217ENST00000530296 ADAMTS8Q9UP79 889 aa18.57■□□□□ 0.56
CTSB-217ENST00000530296 KIF13BQ9NQT8 1826 aa18.57■□□□□ 0.56
CTSB-217ENST00000530296 RNMTO43148 476 aaKnown RBP18.56■□□□□ 0.56
CTSB-217ENST00000530296 ITPK1Q13572 414 aa18.56■□□□□ 0.56
CTSB-217ENST00000530296 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
CTSB-217ENST00000530296 ZNF526Q8TF50 670 aaPredicted RBP18.56■□□□□ 0.56
CTSB-217ENST00000530296 ATG3Q9NT62 314 aa18.56■□□□□ 0.56
CTSB-217ENST00000530296 SCN11AQ9UI33 1791 aa18.55■□□□□ 0.56
CTSB-217ENST00000530296 TEFQ10587 303 aa18.55■□□□□ 0.56
CTSB-217ENST00000530296 NFE2L2Q16236 605 aa18.55■□□□□ 0.56
CTSB-217ENST00000530296 SLC52A2Q9HAB3 445 aa18.55■□□□□ 0.56
CTSB-217ENST00000530296 CCDC87Q9NVE4 849 aa18.55■□□□□ 0.56
CTSB-217ENST00000530296 LMOD3Q0VAK6 560 aa18.54■□□□□ 0.56
CTSB-217ENST00000530296 ADAMTS7Q9UKP4 1686 aa18.54■□□□□ 0.56
CTSB-217ENST00000530296 CNTNAP4Q9C0A0 1308 aa18.53■□□□□ 0.56
CTSB-217ENST00000530296 RFC4P35249 363 aa18.53■□□□□ 0.56
CTSB-217ENST00000530296 NFATC2IPQ8NCF5 419 aa18.53■□□□□ 0.56
CTSB-217ENST00000530296 PNISRQ8TF01 805 aaKnown RBP18.53■□□□□ 0.56
CTSB-217ENST00000530296 LGR6Q9HBX8 967 aa18.53■□□□□ 0.56
CTSB-217ENST00000530296 PXDNLA1KZ92 1463 aa18.52■□□□□ 0.56
CTSB-217ENST00000530296 MRC1P22897 1456 aa18.52■□□□□ 0.56
CTSB-217ENST00000530296 KIF3CO14782 793 aa18.52■□□□□ 0.56
CTSB-217ENST00000530296 RPS6KA4O75676 772 aa18.52■□□□□ 0.56
CTSB-217ENST00000530296 APLP1P51693 650 aa18.52■□□□□ 0.56
CTSB-217ENST00000530296 TOMM70O94826 608 aa18.51■□□□□ 0.55
CTSB-217ENST00000530296 CCDC184Q52MB2 194 aa18.51■□□□□ 0.55
CTSB-217ENST00000530296 SMIM5Q71RC9 77 aa18.51■□□□□ 0.55
CTSB-217ENST00000530296 IL17REQ8NFR9 667 aa18.51■□□□□ 0.55
CTSB-217ENST00000530296 RBM42Q9BTD8 480 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms