RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 SIPA1L3O60292 1781 aaPredicted RBP19.53■□□□□ 0.72
CCDC90B-213ENST00000529611 WDR17Q8IZU2 1322 aa19.52■□□□□ 0.72
CCDC90B-213ENST00000529611 KCNQ3O43525 872 aa19.52■□□□□ 0.72
CCDC90B-213ENST00000529611 SPG7Q9UQ90 795 aa19.52■□□□□ 0.72
CCDC90B-213ENST00000529611 CACNA1FO60840 1977 aa19.52■□□□□ 0.72
CCDC90B-213ENST00000529611 COL5A2P05997 1499 aaPredicted RBP19.52■□□□□ 0.72
CCDC90B-213ENST00000529611 PKD1L3Q7Z443 1732 aa19.51■□□□□ 0.71
CCDC90B-213ENST00000529611 PHKG2P15735 406 aa19.51■□□□□ 0.71
CCDC90B-213ENST00000529611 NECTIN2Q92692 538 aa19.51■□□□□ 0.71
CCDC90B-213ENST00000529611 C1orf115Q9H7X2 142 aa19.51■□□□□ 0.71
CCDC90B-213ENST00000529611 ROBO1Q9Y6N7 1651 aa19.51■□□□□ 0.71
CCDC90B-213ENST00000529611 KDM6AO15550 1401 aaPredicted RBP19.51■□□□□ 0.71
CCDC90B-213ENST00000529611 HOXB7P09629 217 aa19.5■□□□□ 0.71
CCDC90B-213ENST00000529611 SMC5Q8IY18 1101 aa19.5■□□□□ 0.71
CCDC90B-213ENST00000529611 FLIIQ13045 1269 aa19.5■□□□□ 0.71
CCDC90B-213ENST00000529611 HDGFL1Q5TGJ6 251 aa19.5■□□□□ 0.71
CCDC90B-213ENST00000529611 SCN11AQ9UI33 1791 aa19.49■□□□□ 0.71
CCDC90B-213ENST00000529611 IFNL2Q8IZJ0 200 aa19.48■□□□□ 0.71
CCDC90B-213ENST00000529611 F6X3S4 739 aa19.48■□□□□ 0.71
CCDC90B-213ENST00000529611 AHDC1Q5TGY3 1603 aaPredicted RBP19.48■□□□□ 0.71
CCDC90B-213ENST00000529611 CYP27B1O15528 508 aa19.47■□□□□ 0.71
CCDC90B-213ENST00000529611 TOM1L2Q6ZVM7 507 aa19.47■□□□□ 0.71
CCDC90B-213ENST00000529611 HEG1Q9ULI3 1381 aa19.47■□□□□ 0.71
CCDC90B-213ENST00000529611 FAM161AQ3B820 660 aa19.46■□□□□ 0.71
CCDC90B-213ENST00000529611 C8orf34Q49A92 452 aa19.46■□□□□ 0.71
CCDC90B-213ENST00000529611 SIRT2Q8IXJ6 389 aa19.46■□□□□ 0.71
CCDC90B-213ENST00000529611 FKBP5Q13451 457 aaPredicted RBP19.46■□□□□ 0.71
CCDC90B-213ENST00000529611 PARP4Q9UKK3 1724 aaKnown RBP19.45■□□□□ 0.7
CCDC90B-213ENST00000529611 EIF2S2P20042 333 aaKnown RBP19.45■□□□□ 0.7
CCDC90B-213ENST00000529611 SLC52A2Q9HAB3 445 aa19.45■□□□□ 0.7
CCDC90B-213ENST00000529611 CCT4P50991 539 aaKnown RBP19.44■□□□□ 0.7
CCDC90B-213ENST00000529611 SLC4A10Q6U841 1118 aa19.44■□□□□ 0.7
CCDC90B-213ENST00000529611 MRC1P22897 1456 aa19.44■□□□□ 0.7
CCDC90B-213ENST00000529611 DCAF5Q96JK2 942 aa19.44■□□□□ 0.7
CCDC90B-213ENST00000529611 CARD10Q9BWT7 1032 aa19.44■□□□□ 0.7
CCDC90B-213ENST00000529611 CHMP4AQ9BY43 222 aa19.44■□□□□ 0.7
CCDC90B-213ENST00000529611 GIGYF1O75420 1035 aaPredicted RBP19.43■□□□□ 0.7
CCDC90B-213ENST00000529611 MEIS3Q99687 375 aa19.43■□□□□ 0.7
CCDC90B-213ENST00000529611 ATP10DQ9P241 1426 aa19.43■□□□□ 0.7
CCDC90B-213ENST00000529611 LARP1Q6PKG0 1096 aaKnown RBP19.43■□□□□ 0.7
CCDC90B-213ENST00000529611 PHAXQ9H814 394 aaKnown RBP19.43■□□□□ 0.7
CCDC90B-213ENST00000529611 CHPF2Q9P2E5 772 aa19.43■□□□□ 0.7
CCDC90B-213ENST00000529611 STRN4Q9NRL3 753 aa19.42■□□□□ 0.7
CCDC90B-213ENST00000529611 HSP90AB1P08238 724 aaKnown RBP19.41■□□□□ 0.7
CCDC90B-213ENST00000529611 NUCB1Q02818 461 aa19.41■□□□□ 0.7
CCDC90B-213ENST00000529611 NFATC2IPQ8NCF5 419 aa19.41■□□□□ 0.7
CCDC90B-213ENST00000529611 GCC1Q96CN9 775 aa19.41■□□□□ 0.7
CCDC90B-213ENST00000529611 N4BP2Q86UW6 1770 aaPredicted RBP19.41■□□□□ 0.7
CCDC90B-213ENST00000529611 COL22A1Q8NFW1 1626 aaPredicted RBP19.41■□□□□ 0.7
CCDC90B-213ENST00000529611 PXDNLA1KZ92 1463 aa19.41■□□□□ 0.7
CCDC90B-213ENST00000529611 ZNF790Q6PG37 636 aa19.41■□□□□ 0.7
CCDC90B-213ENST00000529611 EVA1CP58658 441 aa19.4■□□□□ 0.7
CCDC90B-213ENST00000529611 ZCRB1Q8TBF4 217 aaKnown RBP19.4■□□□□ 0.7
CCDC90B-213ENST00000529611 PCDH11XQ9BZA7 1347 aa19.39■□□□□ 0.7
CCDC90B-213ENST00000529611 PCDH11YQ9BZA8 1340 aa19.39■□□□□ 0.7
CCDC90B-213ENST00000529611 IL2RBP14784 551 aa19.39■□□□□ 0.7
CCDC90B-213ENST00000529611 SLC39A6Q13433 755 aa19.39■□□□□ 0.7
CCDC90B-213ENST00000529611 ANKRD44Q8N8A2 993 aa19.39■□□□□ 0.7
CCDC90B-213ENST00000529611 PRAMEF22A3QJZ6 481 aa19.39■□□□□ 0.69
CCDC90B-213ENST00000529611 CEP85Q6P2H3 762 aa19.38■□□□□ 0.69
CCDC90B-213ENST00000529611 RPAP2Q8IXW5 612 aaPredicted RBP19.38■□□□□ 0.69
CCDC90B-213ENST00000529611 ANP32AP39687 249 aaKnown RBP19.37■□□□□ 0.69
CCDC90B-213ENST00000529611 CHD1LQ86WJ1 897 aa19.37■□□□□ 0.69
CCDC90B-213ENST00000529611 BTG4Q9NY30 223 aa19.37■□□□□ 0.69
CCDC90B-213ENST00000529611 DBF4Q9UBU7 674 aaPredicted RBP19.37■□□□□ 0.69
CCDC90B-213ENST00000529611 COL14A1Q05707 1796 aaKnown RBP19.37■□□□□ 0.69
CCDC90B-213ENST00000529611 ANXA1P04083 346 aa19.37■□□□□ 0.69
CCDC90B-213ENST00000529611 COL16A1Q07092 1604 aaPredicted RBP19.36■□□□□ 0.69
CCDC90B-213ENST00000529611 SHANK3Q9BYB0 1731 aa19.36■□□□□ 0.69
CCDC90B-213ENST00000529611 LNPKQ9C0E8 428 aa19.36■□□□□ 0.69
CCDC90B-213ENST00000529611 C5P01031 1676 aa19.35■□□□□ 0.69
CCDC90B-213ENST00000529611 MSH5O43196 834 aa19.35■□□□□ 0.69
CCDC90B-213ENST00000529611 CABP4P57796 275 aa19.34■□□□□ 0.69
CCDC90B-213ENST00000529611 PROSER3Q2NL68 480 aa19.34■□□□□ 0.69
CCDC90B-213ENST00000529611 ANKRD45Q5TZF3 282 aa19.34■□□□□ 0.69
CCDC90B-213ENST00000529611 NPM2Q86SE8 214 aaKnown RBP19.34■□□□□ 0.69
CCDC90B-213ENST00000529611 ZNF496Q96IT1 587 aaPredicted RBP19.34■□□□□ 0.69
CCDC90B-213ENST00000529611 DCTPP1Q9H773 170 aa19.34■□□□□ 0.69
CCDC90B-213ENST00000529611 NKX1-1Q15270 411 aaPredicted RBP19.33■□□□□ 0.69
CCDC90B-213ENST00000529611 PHLPP1O60346 1717 aa19.33■□□□□ 0.69
CCDC90B-213ENST00000529611 PI4KAP2A4QPH2 592 aa19.33■□□□□ 0.68
CCDC90B-213ENST00000529611 GNAI2P04899 355 aa19.33■□□□□ 0.68
CCDC90B-213ENST00000529611 GNAI3P08754 354 aa19.33■□□□□ 0.68
CCDC90B-213ENST00000529611 PI4KAP1Q8N8J0 262 aa19.33■□□□□ 0.68
CCDC90B-213ENST00000529611 ADCY9O60503 1353 aa19.32■□□□□ 0.68
CCDC90B-213ENST00000529611 TTC5Q8N0Z6 440 aa19.32■□□□□ 0.68
CCDC90B-213ENST00000529611 DNAAF4Q8WXU2 420 aa19.32■□□□□ 0.68
CCDC90B-213ENST00000529611 USP35Q9P2H5 1018 aa19.32■□□□□ 0.68
CCDC90B-213ENST00000529611 USP44Q9H0E7 712 aa19.32■□□□□ 0.68
CCDC90B-213ENST00000529611 DDX21Q9NR30 783 aaKnown RBP eCLIP19.32■□□□□ 0.68
CCDC90B-213ENST00000529611 PDIA6Q15084 440 aa19.31■□□□□ 0.68
CCDC90B-213ENST00000529611 SRCIN1Q9C0H9 1055 aa19.31■□□□□ 0.68
CCDC90B-213ENST00000529611 HYPKQ9NX55 129 aa19.31■□□□□ 0.68
CCDC90B-213ENST00000529611 GLI3P10071 1580 aa19.31■□□□□ 0.68
CCDC90B-213ENST00000529611 ERVV-2B6SEH9 535 aa19.3■□□□□ 0.68
CCDC90B-213ENST00000529611 BEND3Q5T5X7 828 aa19.3■□□□□ 0.68
CCDC90B-213ENST00000529611 DDX54Q8TDD1 881 aaKnown RBP19.3■□□□□ 0.68
CCDC90B-213ENST00000529611 FMNL2Q96PY5 1086 aa19.3■□□□□ 0.68
CCDC90B-213ENST00000529611 HMMRO75330 724 aa19.29■□□□□ 0.68
CCDC90B-213ENST00000529611 SNRPA1P09661 255 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms