RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 ZNF831Q5JPB2 1677 aa28.24■■■□□ 2.11
SF3B2-207ENST00000529577 AEBP1Q8IUX7 1158 aa28.24■■■□□ 2.11
SF3B2-207ENST00000529577 SSFA2P28290 1259 aa28.23■■■□□ 2.11
SF3B2-207ENST00000529577 ATP6V1AP38606 617 aa28.22■■■□□ 2.11
SF3B2-207ENST00000529577 PLEKHG2Q9H7P9 1386 aa28.21■■■□□ 2.11
SF3B2-207ENST00000529577 WWC3Q9ULE0 1092 aa28.2■■■□□ 2.1
SF3B2-207ENST00000529577 MYH14Q7Z406 1995 aaKnown RBP28.2■■■□□ 2.1
SF3B2-207ENST00000529577 GNPATO15228 680 aa28.19■■■□□ 2.1
SF3B2-207ENST00000529577 GRIN3BO60391 1043 aa28.18■■■□□ 2.1
SF3B2-207ENST00000529577 KIF13BQ9NQT8 1826 aa28.18■■■□□ 2.1
SF3B2-207ENST00000529577 ADCY9O60503 1353 aa28.16■■■□□ 2.1
SF3B2-207ENST00000529577 ERVV-2B6SEH9 535 aa28.15■■■□□ 2.1
SF3B2-207ENST00000529577 ATP10DQ9P241 1426 aa28.15■■■□□ 2.1
SF3B2-207ENST00000529577 C4AP0C0L4 1744 aa28.15■■■□□ 2.1
SF3B2-207ENST00000529577 DCAF5Q96JK2 942 aa28.14■■■□□ 2.1
SF3B2-207ENST00000529577 TJP1Q07157 1748 aa28.14■■■□□ 2.1
SF3B2-207ENST00000529577 SENP3-EIF4A1A0A087X0R7 540 aa28.13■■■□□ 2.09
SF3B2-207ENST00000529577 IL13P35225 146 aa28.13■■■□□ 2.09
SF3B2-207ENST00000529577 ZNF530Q6P9A1 599 aaPredicted RBP28.13■■■□□ 2.09
SF3B2-207ENST00000529577 N4BP2Q86UW6 1770 aaPredicted RBP28.13■■■□□ 2.09
SF3B2-207ENST00000529577 CEP350Q5VT06 3117 aa28.12■■■□□ 2.09
SF3B2-207ENST00000529577 AMER1Q5JTC6 1135 aaPredicted RBP28.12■■■□□ 2.09
SF3B2-207ENST00000529577 MORC1Q86VD1 984 aa28.12■■■□□ 2.09
SF3B2-207ENST00000529577 CICQ96RK0 1608 aaPredicted RBP28.11■■■□□ 2.09
SF3B2-207ENST00000529577 PXDNLA1KZ92 1463 aa28.11■■■□□ 2.09
SF3B2-207ENST00000529577 GIGYF1O75420 1035 aaPredicted RBP28.11■■■□□ 2.09
SF3B2-207ENST00000529577 HMGB2P26583 209 aaKnown RBP28.11■■■□□ 2.09
SF3B2-207ENST00000529577 PLEKHO1Q53GL0 409 aaPredicted RBP28.11■■■□□ 2.09
SF3B2-207ENST00000529577 SCN11AQ9UI33 1791 aa28.11■■■□□ 2.09
SF3B2-207ENST00000529577 MMP10P09238 476 aa28.1■■■□□ 2.09
SF3B2-207ENST00000529577 RBM42Q9BTD8 480 aaKnown RBP28.1■■■□□ 2.09
SF3B2-207ENST00000529577 ADAMTS7Q9UKP4 1686 aa28.1■■■□□ 2.09
SF3B2-207ENST00000529577 SULT6B1Q6IMI4 303 aa28.09■■■□□ 2.09
SF3B2-207ENST00000529577 ARHGEF1Q92888 912 aaKnown RBP28.09■■■□□ 2.09
SF3B2-207ENST00000529577 RC3H1Q5TC82 1133 aaKnown RBP28.07■■■□□ 2.08
SF3B2-207ENST00000529577 CCER1Q8TC90 406 aaPredicted RBP28.07■■■□□ 2.08
SF3B2-207ENST00000529577 KIF7Q2M1P5 1343 aa28.07■■■□□ 2.08
SF3B2-207ENST00000529577 CNTNAP4Q9C0A0 1308 aa28.07■■■□□ 2.08
SF3B2-207ENST00000529577 GYS1P13807 737 aa28.06■■■□□ 2.08
SF3B2-207ENST00000529577 AMOTQ4VCS5 1084 aa28.06■■■□□ 2.08
SF3B2-207ENST00000529577 HSP90AB1P08238 724 aaKnown RBP28.05■■■□□ 2.08
SF3B2-207ENST00000529577 CABP4P57796 275 aa28.05■■■□□ 2.08
SF3B2-207ENST00000529577 C10orf71Q711Q0 1435 aa28.05■■■□□ 2.08
SF3B2-207ENST00000529577 NFATC2IPQ8NCF5 419 aa28.05■■■□□ 2.08
SF3B2-207ENST00000529577 RTCBQ9Y3I0 505 aaKnown RBP28.05■■■□□ 2.08
SF3B2-207ENST00000529577 BRCA1P38398 1863 aaKnown RBP28.04■■■□□ 2.08
SF3B2-207ENST00000529577 VIRMAQ69YN4 1812 aaKnown RBP28.04■■■□□ 2.08
SF3B2-207ENST00000529577 RPS6KA4O75676 772 aa28.04■■■□□ 2.08
SF3B2-207ENST00000529577 MTHFSP49914 203 aa28.04■■■□□ 2.08
SF3B2-207ENST00000529577 TRAPPC3LQ5T215 181 aa28.04■■■□□ 2.08
SF3B2-207ENST00000529577 PER1O15534 1290 aaPredicted RBP28.02■■■□□ 2.08
SF3B2-207ENST00000529577 PTCD1O75127 700 aaKnown RBP28.02■■■□□ 2.08
SF3B2-207ENST00000529577 LGR6Q9HBX8 967 aa28.01■■■□□ 2.07
SF3B2-207ENST00000529577 KNSTRNQ9Y448 316 aa28.01■■■□□ 2.07
SF3B2-207ENST00000529577 A0A0G2JLW4 131 aa28■■■□□ 2.07
SF3B2-207ENST00000529577 SRP68Q9UHB9 627 aaKnown RBP28■■■□□ 2.07
SF3B2-207ENST00000529577 ZNF526Q8TF50 670 aaPredicted RBP27.99■■■□□ 2.07
SF3B2-207ENST00000529577 MRC1P22897 1456 aa27.99■■■□□ 2.07
SF3B2-207ENST00000529577 KCNA3P22001 575 aa27.98■■■□□ 2.07
SF3B2-207ENST00000529577 CRKLP46109 303 aaKnown RBP27.98■■■□□ 2.07
SF3B2-207ENST00000529577 INTS5Q6P9B9 1019 aaKnown RBP27.98■■■□□ 2.07
SF3B2-207ENST00000529577 ADRA2BP18089 450 aa27.97■■■□□ 2.07
SF3B2-207ENST00000529577 C1orf141Q5JVX7 400 aa27.97■■■□□ 2.07
SF3B2-207ENST00000529577 NLGN1Q8N2Q7 840 aa27.97■■■□□ 2.07
SF3B2-207ENST00000529577 KCPQ6ZWJ8 1503 aa27.96■■■□□ 2.07
SF3B2-207ENST00000529577 HMOX1P09601 288 aa27.95■■■□□ 2.06
SF3B2-207ENST00000529577 DPEP1P16444 411 aa27.95■■■□□ 2.06
SF3B2-207ENST00000529577 DDR1Q08345 913 aa27.95■■■□□ 2.06
SF3B2-207ENST00000529577 FKBP8Q14318 412 aa27.95■■■□□ 2.06
SF3B2-207ENST00000529577 COL3A1P02461 1466 aaPredicted RBP27.95■■■□□ 2.06
SF3B2-207ENST00000529577 RFC4P35249 363 aa27.93■■■□□ 2.06
SF3B2-207ENST00000529577 TGFB2P61812 414 aa27.93■■■□□ 2.06
SF3B2-207ENST00000529577 AKAP4Q5JQC9 854 aa27.93■■■□□ 2.06
SF3B2-207ENST00000529577 DNAJC10Q8IXB1 793 aa27.93■■■□□ 2.06
SF3B2-207ENST00000529577 GPBP1L1Q9HC44 474 aaPredicted RBP27.93■■■□□ 2.06
SF3B2-207ENST00000529577 USP42Q9H9J4 1324 aaKnown RBP27.92■■■□□ 2.06
SF3B2-207ENST00000529577 SLC39A6Q13433 755 aa27.92■■■□□ 2.06
SF3B2-207ENST00000529577 SLC52A2Q9HAB3 445 aa27.92■■■□□ 2.06
SF3B2-207ENST00000529577 KIF3CO14782 793 aa27.91■■■□□ 2.06
SF3B2-207ENST00000529577 RNMTO43148 476 aaKnown RBP27.91■■■□□ 2.06
SF3B2-207ENST00000529577 MTHFSDQ2M296 383 aaKnown RBP27.91■■■□□ 2.06
SF3B2-207ENST00000529577 UBR2Q8IWV8 1755 aa27.9■■■□□ 2.06
SF3B2-207ENST00000529577 CC2D1BQ5T0F9 858 aaKnown RBP27.89■■■□□ 2.06
SF3B2-207ENST00000529577 BCS1LQ9Y276 419 aa27.89■■■□□ 2.06
SF3B2-207ENST00000529577 ARFGEF1Q9Y6D6 1849 aa27.89■■■□□ 2.06
SF3B2-207ENST00000529577 TM4SF1P30408 202 aa27.87■■■□□ 2.05
SF3B2-207ENST00000529577 CCDC87Q9NVE4 849 aa27.87■■■□□ 2.05
SF3B2-207ENST00000529577 CYP19A1P11511 503 aaPredicted RBP27.86■■■□□ 2.05
SF3B2-207ENST00000529577 PARP3Q9Y6F1 533 aa27.86■■■□□ 2.05
SF3B2-207ENST00000529577 SOS1Q07889 1333 aaPredicted RBP27.86■■■□□ 2.05
SF3B2-207ENST00000529577 AFDNP55196 1824 aaKnown RBP27.85■■■□□ 2.05
SF3B2-207ENST00000529577 POLRMTO00411 1230 aaKnown RBP27.84■■■□□ 2.05
SF3B2-207ENST00000529577 NRXN2Q9P2S2 1712 aa27.84■■■□□ 2.05
SF3B2-207ENST00000529577 BCL2L12Q9HB09 334 aa27.83■■■□□ 2.05
SF3B2-207ENST00000529577 SIPA1L3O60292 1781 aaPredicted RBP27.83■■■□□ 2.05
SF3B2-207ENST00000529577 CHRNA5P30532 468 aa27.82■■■□□ 2.04
SF3B2-207ENST00000529577 USPL1Q5W0Q7 1092 aa27.82■■■□□ 2.04
SF3B2-207ENST00000529577 DIAPH1O60610 1272 aaKnown RBP27.81■■■□□ 2.04
SF3B2-207ENST00000529577 FCHSD2O94868 740 aa27.81■■■□□ 2.04
SF3B2-207ENST00000529577 ZBTB1Q9Y2K1 713 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms