RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 CARD14Q9BXL6 1004 aa8.64□□□□□ -1.03
CHRNA6-202ENST00000529467 FLT4P35916 1363 aa8.63□□□□□ -1.03
CHRNA6-202ENST00000529467 SMIM5Q71RC9 77 aa8.63□□□□□ -1.03
CHRNA6-202ENST00000529467 SP7Q8TDD2 431 aaPredicted RBP8.63□□□□□ -1.03
CHRNA6-202ENST00000529467 EMILIN1Q9Y6C2 1016 aa8.63□□□□□ -1.03
CHRNA6-202ENST00000529467 UBR3Q6ZT12 1888 aa8.63□□□□□ -1.03
CHRNA6-202ENST00000529467 MAP2P11137 1827 aaKnown RBP8.63□□□□□ -1.03
CHRNA6-202ENST00000529467 KIF20BQ96Q89 1820 aa8.63□□□□□ -1.03
CHRNA6-202ENST00000529467 C4BP0C0L5 1744 aa8.63□□□□□ -1.03
CHRNA6-202ENST00000529467 TOGARAM1Q9Y4F4 1720 aa8.63□□□□□ -1.03
CHRNA6-202ENST00000529467 CDCA8Q53HL2 280 aa8.62□□□□□ -1.03
CHRNA6-202ENST00000529467 SSUH2Q9Y2M2 353 aa8.62□□□□□ -1.03
CHRNA6-202ENST00000529467 NCAPD2Q15021 1401 aa8.62□□□□□ -1.03
CHRNA6-202ENST00000529467 ATP10DQ9P241 1426 aa8.62□□□□□ -1.03
CHRNA6-202ENST00000529467 WASHC2AQ641Q2 1341 aa8.61□□□□□ -1.03
CHRNA6-202ENST00000529467 PKD1L3Q7Z443 1732 aa8.61□□□□□ -1.03
CHRNA6-202ENST00000529467 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.61□□□□□ -1.03
CHRNA6-202ENST00000529467 LOC102724428A0A0B4J2F2 783 aa8.61□□□□□ -1.03
CHRNA6-202ENST00000529467 SIK1P57059 783 aa8.61□□□□□ -1.03
CHRNA6-202ENST00000529467 LINC00116Q8NCU8 138 aa8.61□□□□□ -1.03
CHRNA6-202ENST00000529467 AK7Q96M32 723 aa8.61□□□□□ -1.03
CHRNA6-202ENST00000529467 EYA1Q99502 592 aa8.61□□□□□ -1.03
CHRNA6-202ENST00000529467 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.61□□□□□ -1.03
CHRNA6-202ENST00000529467 SPG7Q9UQ90 795 aa8.61□□□□□ -1.03
CHRNA6-202ENST00000529467 ADCY9O60503 1353 aa8.61□□□□□ -1.03
CHRNA6-202ENST00000529467 IGSF1Q8N6C5 1336 aa8.6□□□□□ -1.03
CHRNA6-202ENST00000529467 PHF14O94880 888 aa8.6□□□□□ -1.03
CHRNA6-202ENST00000529467 SSFA2P28290 1259 aa8.6□□□□□ -1.03
CHRNA6-202ENST00000529467 ITPK1Q13572 414 aa8.6□□□□□ -1.03
CHRNA6-202ENST00000529467 GPBP1L1Q9HC44 474 aaPredicted RBP8.6□□□□□ -1.03
CHRNA6-202ENST00000529467 ASAP1Q9ULH1 1129 aa8.6□□□□□ -1.03
CHRNA6-202ENST00000529467 GOLGB1Q14789 3259 aaKnown RBP8.6□□□□□ -1.03
CHRNA6-202ENST00000529467 PPM1GO15355 546 aaPredicted RBP8.59□□□□□ -1.03
CHRNA6-202ENST00000529467 PHKG2P15735 406 aa8.59□□□□□ -1.03
CHRNA6-202ENST00000529467 ATP6V1AP38606 617 aa8.59□□□□□ -1.03
CHRNA6-202ENST00000529467 IFFO2Q5TF58 517 aa8.59□□□□□ -1.03
CHRNA6-202ENST00000529467 ATG3Q9NT62 314 aa8.59□□□□□ -1.03
CHRNA6-202ENST00000529467 POLKQ9UBT6 870 aa8.59□□□□□ -1.03
CHRNA6-202ENST00000529467 NSD3Q9BZ95 1437 aa8.58□□□□□ -1.04
CHRNA6-202ENST00000529467 IFNL2Q8IZJ0 200 aa8.58□□□□□ -1.04
CHRNA6-202ENST00000529467 TMOD3Q9NYL9 352 aa8.58□□□□□ -1.04
CHRNA6-202ENST00000529467 WWC3Q9ULE0 1092 aa8.58□□□□□ -1.04
CHRNA6-202ENST00000529467 ANKRD26Q9UPS8 1709 aa8.57□□□□□ -1.04
CHRNA6-202ENST00000529467 GNPATO15228 680 aa8.57□□□□□ -1.04
CHRNA6-202ENST00000529467 HSPA6P17066 643 aa8.57□□□□□ -1.04
CHRNA6-202ENST00000529467 ZNF526Q8TF50 670 aaPredicted RBP8.57□□□□□ -1.04
CHRNA6-202ENST00000529467 SLC4A9Q96Q91 983 aa8.57□□□□□ -1.04
CHRNA6-202ENST00000529467 KIF3CO14782 793 aa8.56□□□□□ -1.04
CHRNA6-202ENST00000529467 MMP10P09238 476 aa8.56□□□□□ -1.04
CHRNA6-202ENST00000529467 EIF4A2Q14240 407 aaKnown RBP8.56□□□□□ -1.04
CHRNA6-202ENST00000529467 TRAPPC3LQ5T215 181 aa8.56□□□□□ -1.04
CHRNA6-202ENST00000529467 KIF13BQ9NQT8 1826 aa8.56□□□□□ -1.04
CHRNA6-202ENST00000529467 ERVV-2B6SEH9 535 aa8.55□□□□□ -1.04
CHRNA6-202ENST00000529467 TGFB2P61812 414 aa8.55□□□□□ -1.04
CHRNA6-202ENST00000529467 RC3H1Q5TC82 1133 aaKnown RBP8.55□□□□□ -1.04
CHRNA6-202ENST00000529467 NLGN1Q8N2Q7 840 aa8.55□□□□□ -1.04
CHRNA6-202ENST00000529467 SPDYE1Q8NFV5 336 aaPredicted RBP8.55□□□□□ -1.04
CHRNA6-202ENST00000529467 ARHGEF1Q92888 912 aaKnown RBP8.55□□□□□ -1.04
CHRNA6-202ENST00000529467 RTCBQ9Y3I0 505 aaKnown RBP8.55□□□□□ -1.04
CHRNA6-202ENST00000529467 N4BP2Q86UW6 1770 aaPredicted RBP8.55□□□□□ -1.04
CHRNA6-202ENST00000529467 MYH14Q7Z406 1995 aaKnown RBP8.55□□□□□ -1.04
CHRNA6-202ENST00000529467 KIAA1551Q9HCM1 1747 aa8.54□□□□□ -1.04
CHRNA6-202ENST00000529467 KDRP35968 1356 aa8.54□□□□□ -1.04
CHRNA6-202ENST00000529467 PLEKHG2Q9H7P9 1386 aa8.54□□□□□ -1.04
CHRNA6-202ENST00000529467 A0A0G2JLW4 131 aa8.54□□□□□ -1.04
CHRNA6-202ENST00000529467 RPS6KA4O75676 772 aa8.54□□□□□ -1.04
CHRNA6-202ENST00000529467 ZNF831Q5JPB2 1677 aa8.53□□□□□ -1.04
CHRNA6-202ENST00000529467 PXDNLA1KZ92 1463 aa8.53□□□□□ -1.04
CHRNA6-202ENST00000529467 GYS1P13807 737 aa8.53□□□□□ -1.04
CHRNA6-202ENST00000529467 KCNA3P22001 575 aa8.53□□□□□ -1.04
CHRNA6-202ENST00000529467 TNNT2P45379 298 aaPredicted RBP8.53□□□□□ -1.04
CHRNA6-202ENST00000529467 PLEKHO1Q53GL0 409 aaPredicted RBP8.53□□□□□ -1.04
CHRNA6-202ENST00000529467 DCAF5Q96JK2 942 aa8.53□□□□□ -1.04
CHRNA6-202ENST00000529467 CICQ96RK0 1608 aaPredicted RBP8.53□□□□□ -1.04
CHRNA6-202ENST00000529467 CNTNAP4Q9C0A0 1308 aa8.53□□□□□ -1.04
CHRNA6-202ENST00000529467 COL5A3P25940 1745 aaPredicted RBP8.52□□□□□ -1.05
CHRNA6-202ENST00000529467 HSP90AB1P08238 724 aaKnown RBP8.52□□□□□ -1.05
CHRNA6-202ENST00000529467 DPEP1P16444 411 aa8.52□□□□□ -1.05
CHRNA6-202ENST00000529467 BCS1LQ9Y276 419 aa8.52□□□□□ -1.05
CHRNA6-202ENST00000529467 CEP350Q5VT06 3117 aa8.51□□□□□ -1.05
CHRNA6-202ENST00000529467 BRCA1P38398 1863 aaKnown RBP8.51□□□□□ -1.05
CHRNA6-202ENST00000529467 TOMM70O94826 608 aa8.51□□□□□ -1.05
CHRNA6-202ENST00000529467 RFC4P35249 363 aa8.51□□□□□ -1.05
CHRNA6-202ENST00000529467 CABP4P57796 275 aa8.51□□□□□ -1.05
CHRNA6-202ENST00000529467 AMOTQ4VCS5 1084 aa8.51□□□□□ -1.05
CHRNA6-202ENST00000529467 ARHGAP27Q6ZUM4 889 aa8.51□□□□□ -1.05
CHRNA6-202ENST00000529467 DNAJC5GQ8N7S2 189 aa8.51□□□□□ -1.05
CHRNA6-202ENST00000529467 POLR3GLQ9BT43 218 aa8.51□□□□□ -1.05
CHRNA6-202ENST00000529467 CCDC87Q9NVE4 849 aa8.51□□□□□ -1.05
CHRNA6-202ENST00000529467 PARP3Q9Y6F1 533 aa8.51□□□□□ -1.05
CHRNA6-202ENST00000529467 KDM6AO15550 1401 aaPredicted RBP8.51□□□□□ -1.05
CHRNA6-202ENST00000529467 C10orf71Q711Q0 1435 aa8.51□□□□□ -1.05
CHRNA6-202ENST00000529467 FCHSD2O94868 740 aa8.5□□□□□ -1.05
CHRNA6-202ENST00000529467 C4AP0C0L4 1744 aa8.5□□□□□ -1.05
CHRNA6-202ENST00000529467 MTHFSP49914 203 aa8.5□□□□□ -1.05
CHRNA6-202ENST00000529467 ZNF530Q6P9A1 599 aaPredicted RBP8.5□□□□□ -1.05
CHRNA6-202ENST00000529467 NFATC2IPQ8NCF5 419 aa8.5□□□□□ -1.05
CHRNA6-202ENST00000529467 PANK3Q9H999 370 aa8.5□□□□□ -1.05
CHRNA6-202ENST00000529467 ARFGEF1Q9Y6D6 1849 aa8.5□□□□□ -1.05
CHRNA6-202ENST00000529467 HAX1O00165 279 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms