RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 SIRT1Q96EB6 747 aa9.11□□□□□ -0.95
CTR9-204ENST00000529355 ATP13A2Q9NQ11 1180 aa9.11□□□□□ -0.95
CTR9-204ENST00000529355 SERTAD1Q9UHV2 236 aa9.11□□□□□ -0.95
CTR9-204ENST00000529355 MEN1O00255 615 aa9.1□□□□□ -0.95
CTR9-204ENST00000529355 BMP2P12643 396 aa9.1□□□□□ -0.95
CTR9-204ENST00000529355 GDF10P55107 478 aa9.1□□□□□ -0.95
CTR9-204ENST00000529355 CYP2U1Q7Z449 544 aa9.1□□□□□ -0.95
CTR9-204ENST00000529355 SOBPA7XYQ1 873 aa9.09□□□□□ -0.95
CTR9-204ENST00000529355 GNRH1P01148 92 aa9.09□□□□□ -0.95
CTR9-204ENST00000529355 LARP1Q6PKG0 1096 aaKnown RBP9.09□□□□□ -0.95
CTR9-204ENST00000529355 TRIM50Q86XT4 487 aa9.09□□□□□ -0.95
CTR9-204ENST00000529355 TSEN34Q9BSV6 310 aaKnown RBP9.09□□□□□ -0.95
CTR9-204ENST00000529355 ZNF358Q9NW07 568 aa9.09□□□□□ -0.95
CTR9-204ENST00000529355 HRH3Q9Y5N1 445 aa9.09□□□□□ -0.95
CTR9-204ENST00000529355 FAM196BA6NMK8 535 aa9.08□□□□□ -0.96
CTR9-204ENST00000529355 SPINT1O43278 529 aa9.08□□□□□ -0.96
CTR9-204ENST00000529355 INHAP05111 366 aa9.08□□□□□ -0.96
CTR9-204ENST00000529355 LARGE2Q8N3Y3 721 aa9.08□□□□□ -0.96
CTR9-204ENST00000529355 CNKSR1Q969H4 720 aa9.08□□□□□ -0.96
CTR9-204ENST00000529355 XAGE2Q96GT9 111 aa9.08□□□□□ -0.96
CTR9-204ENST00000529355 TRIM47Q96LD4 638 aa9.08□□□□□ -0.96
CTR9-204ENST00000529355 NOVA2Q9UNW9 492 aaKnown RBP9.08□□□□□ -0.96
CTR9-204ENST00000529355 USP3Q9Y6I4 520 aa9.08□□□□□ -0.96
CTR9-204ENST00000529355 FIGNL2A6NMB9 653 aa9.07□□□□□ -0.96
CTR9-204ENST00000529355 ATG7O95352 703 aa9.07□□□□□ -0.96
CTR9-204ENST00000529355 SNRPBP14678 240 aaKnown RBP9.07□□□□□ -0.96
CTR9-204ENST00000529355 ATP1A2P50993 1020 aa9.07□□□□□ -0.96
CTR9-204ENST00000529355 FOXD4L5Q5VV16 416 aaPredicted RBP9.07□□□□□ -0.96
CTR9-204ENST00000529355 ANKMY2Q8IV38 441 aa9.07□□□□□ -0.96
CTR9-204ENST00000529355 SIX5Q8N196 739 aa9.07□□□□□ -0.96
CTR9-204ENST00000529355 SLAIN2Q9P270 581 aa9.07□□□□□ -0.96
CTR9-204ENST00000529355 LORP23490 312 aaPredicted RBP9.06□□□□□ -0.96
CTR9-204ENST00000529355 CLN3Q13286 438 aa9.06□□□□□ -0.96
CTR9-204ENST00000529355 TMEM164Q5U3C3 297 aa9.06□□□□□ -0.96
CTR9-204ENST00000529355 TNS4Q8IZW8 715 aa9.06□□□□□ -0.96
CTR9-204ENST00000529355 TSEN2Q8NCE0 465 aaKnown RBP9.06□□□□□ -0.96
CTR9-204ENST00000529355 CENPCQ03188 943 aa9.05□□□□□ -0.96
CTR9-204ENST00000529355 TBCELQ5QJ74 424 aa9.05□□□□□ -0.96
CTR9-204ENST00000529355 KIFC2Q96AC6 838 aa9.05□□□□□ -0.96
CTR9-204ENST00000529355 ESYT1Q9BSJ8 1104 aa9.05□□□□□ -0.96
CTR9-204ENST00000529355 POLMQ9NP87 494 aaPredicted RBP9.05□□□□□ -0.96
CTR9-204ENST00000529355 FAM69CQ0P6D2 419 aa9.04□□□□□ -0.96
CTR9-204ENST00000529355 FHDC1Q9C0D6 1143 aaPredicted RBP9.04□□□□□ -0.96
CTR9-204ENST00000529355 SOS2Q07890 1332 aaPredicted RBP9.04□□□□□ -0.96
CTR9-204ENST00000529355 PPP1R15AO75807 674 aaPredicted RBP9.03□□□□□ -0.96
CTR9-204ENST00000529355 UPP2O95045 317 aa9.03□□□□□ -0.96
CTR9-204ENST00000529355 GMPRP36959 345 aa9.03□□□□□ -0.96
CTR9-204ENST00000529355 SCARF1Q14162 830 aa9.03□□□□□ -0.96
CTR9-204ENST00000529355 RETREG2Q8NC44 543 aa9.03□□□□□ -0.96
CTR9-204ENST00000529355 FAM200AQ8TCP9 573 aa9.03□□□□□ -0.96
CTR9-204ENST00000529355 IRF7Q92985 503 aa9.03□□□□□ -0.96
CTR9-204ENST00000529355 DNMT3LQ9UJW3 386 aa9.03□□□□□ -0.96
CTR9-204ENST00000529355 TTLL8A6PVC2 850 aa9.02□□□□□ -0.97
CTR9-204ENST00000529355 EPHA4P54764 986 aa9.02□□□□□ -0.97
CTR9-204ENST00000529355 SEC13P55735 322 aa9.02□□□□□ -0.97
CTR9-204ENST00000529355 ELOAQ14241 798 aaKnown RBP9.02□□□□□ -0.97
CTR9-204ENST00000529355 PRICKLE2Q7Z3G6 844 aa9.02□□□□□ -0.97
CTR9-204ENST00000529355 RNF217Q8TC41 542 aa9.02□□□□□ -0.97
CTR9-204ENST00000529355 NLRP3Q96P20 1036 aa9.02□□□□□ -0.97
CTR9-204ENST00000529355 SLC4A9Q96Q91 983 aa9.02□□□□□ -0.97
CTR9-204ENST00000529355 TMEM88BA6NKF7 163 aa9.01□□□□□ -0.97
CTR9-204ENST00000529355 WASLO00401 505 aaPredicted RBP9.01□□□□□ -0.97
CTR9-204ENST00000529355 RHOQP17081 205 aa9.01□□□□□ -0.97
CTR9-204ENST00000529355 SMTNP53814 917 aa9.01□□□□□ -0.97
CTR9-204ENST00000529355 TLR1Q15399 786 aa9.01□□□□□ -0.97
CTR9-204ENST00000529355 GRIP2Q9C0E4 1043 aa9.01□□□□□ -0.97
CTR9-204ENST00000529355 A6NJY4 79 aa9□□□□□ -0.97
CTR9-204ENST00000529355 RNF144AP50876 292 aaPredicted RBP9□□□□□ -0.97
CTR9-204ENST00000529355 POU4F2Q12837 409 aa9□□□□□ -0.97
CTR9-204ENST00000529355 ESCO1Q5FWF5 840 aa9□□□□□ -0.97
CTR9-204ENST00000529355 HINFPQ9BQA5 517 aa9□□□□□ -0.97
CTR9-204ENST00000529355 TSPAN10Q9H1Z9 355 aaPredicted RBP9□□□□□ -0.97
CTR9-204ENST00000529355 ACIN1Q9UKV3 1341 aaKnown RBP9□□□□□ -0.97
CTR9-204ENST00000529355 SCNN1AP37088 669 aa8.99□□□□□ -0.97
CTR9-204ENST00000529355 NPAS3Q8IXF0 933 aa8.99□□□□□ -0.97
CTR9-204ENST00000529355 TRIM52Q96A61 297 aa8.99□□□□□ -0.97
CTR9-204ENST00000529355 PRIMPOLQ96LW4 560 aa8.99□□□□□ -0.97
CTR9-204ENST00000529355 NXF1Q9UBU9 619 aaKnown RBP8.99□□□□□ -0.97
CTR9-204ENST00000529355 IQSEC3Q9UPP2 1182 aaPredicted RBP8.99□□□□□ -0.97
CTR9-204ENST00000529355 PARP3Q9Y6F1 533 aa8.99□□□□□ -0.97
CTR9-204ENST00000529355 C21orf2O43822 256 aa8.98□□□□□ -0.97
CTR9-204ENST00000529355 PHKA2P46019 1235 aa8.98□□□□□ -0.97
CTR9-204ENST00000529355 FOXK2Q01167 660 aa8.98□□□□□ -0.97
CTR9-204ENST00000529355 MTFR1Q15390 333 aa8.98□□□□□ -0.97
CTR9-204ENST00000529355 SLC27A3Q5K4L6 730 aa8.98□□□□□ -0.97
CTR9-204ENST00000529355 SH3PXD2AQ5TCZ1 1133 aa8.98□□□□□ -0.97
CTR9-204ENST00000529355 ZNF295-AS1Q8N0V1 137 aa8.98□□□□□ -0.97
CTR9-204ENST00000529355 KCTD17Q8N5Z5 321 aa8.98□□□□□ -0.97
CTR9-204ENST00000529355 ZSCAN10Q96SZ4 725 aaPredicted RBP8.98□□□□□ -0.97
CTR9-204ENST00000529355 PRMT3O60678 531 aa8.97□□□□□ -0.97
CTR9-204ENST00000529355 KCNMA1Q12791 1236 aa8.97□□□□□ -0.97
CTR9-204ENST00000529355 SLC9A9Q8IVB4 645 aa8.97□□□□□ -0.97
CTR9-204ENST00000529355 SCHIP1Q9P0W5 487 aaPredicted RBP8.97□□□□□ -0.97
CTR9-204ENST00000529355 BACH1O14867 736 aa8.96□□□□□ -0.98
CTR9-204ENST00000529355 ZDHHC1Q8WTX9 485 aa8.96□□□□□ -0.98
CTR9-204ENST00000529355 RBM19Q9Y4C8 960 aaKnown RBP8.96□□□□□ -0.98
CTR9-204ENST00000529355 M0R2N6 131 aa8.95□□□□□ -0.98
CTR9-204ENST00000529355 MAN1A2O60476 641 aa8.95□□□□□ -0.98
CTR9-204ENST00000529355 CSB-PGBD3P0DP91 1061 aa8.95□□□□□ -0.98
CTR9-204ENST00000529355 C4orf17Q53FE4 359 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms