RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 LTBP4Q8N2S1 1624 aa21.09■□□□□ 0.97
CAPRIN1-207ENST00000529307 RNMTO43148 476 aaKnown RBP21.08■□□□□ 0.96
CAPRIN1-207ENST00000529307 PDE4AP27815 886 aa21.08■□□□□ 0.96
CAPRIN1-207ENST00000529307 PRDM11Q9NQV5 511 aa21.08■□□□□ 0.96
CAPRIN1-207ENST00000529307 C1orf141Q5JVX7 400 aa21.07■□□□□ 0.96
CAPRIN1-207ENST00000529307 ABCA3Q99758 1704 aa21.07■□□□□ 0.96
CAPRIN1-207ENST00000529307 RAPGEF4Q8WZA2 1011 aa21.07■□□□□ 0.96
CAPRIN1-207ENST00000529307 BACH2Q9BYV9 841 aa21.07■□□□□ 0.96
CAPRIN1-207ENST00000529307 API5Q9BZZ5 524 aaKnown RBP21.07■□□□□ 0.96
CAPRIN1-207ENST00000529307 SLC4A2P04920 1241 aa21.06■□□□□ 0.96
CAPRIN1-207ENST00000529307 ZBTB7BO15156 539 aaPredicted RBP21.06■□□□□ 0.96
CAPRIN1-207ENST00000529307 KCNQ3O43525 872 aa21.06■□□□□ 0.96
CAPRIN1-207ENST00000529307 G2E3Q7L622 706 aa21.05■□□□□ 0.96
CAPRIN1-207ENST00000529307 TATP17735 454 aaPredicted RBP21.04■□□□□ 0.96
CAPRIN1-207ENST00000529307 TEFQ10587 303 aa21.03■□□□□ 0.96
CAPRIN1-207ENST00000529307 EIF4A1P60842 406 aaKnown RBP21.03■□□□□ 0.96
CAPRIN1-207ENST00000529307 RWDD1Q9H446 243 aaPredicted RBP21.03■□□□□ 0.96
CAPRIN1-207ENST00000529307 KDM3BQ7LBC6 1761 aa21.02■□□□□ 0.96
CAPRIN1-207ENST00000529307 NECTIN2Q92692 538 aa21.02■□□□□ 0.96
CAPRIN1-207ENST00000529307 OVOS2A0A0G2JMS6 1433 aa21.02■□□□□ 0.96
CAPRIN1-207ENST00000529307 ROBO1Q9Y6N7 1651 aa21.02■□□□□ 0.96
CAPRIN1-207ENST00000529307 PTPRCP08575 1304 aa21.02■□□□□ 0.95
CAPRIN1-207ENST00000529307 COL5A2P05997 1499 aaPredicted RBP21.02■□□□□ 0.95
CAPRIN1-207ENST00000529307 ADAMTS7Q9UKP4 1686 aa21.01■□□□□ 0.95
CAPRIN1-207ENST00000529307 BTBD11A6QL63 1104 aa21.01■□□□□ 0.95
CAPRIN1-207ENST00000529307 RGS3P49796 1198 aa21.01■□□□□ 0.95
CAPRIN1-207ENST00000529307 WDR17Q8IZU2 1322 aa21.01■□□□□ 0.95
CAPRIN1-207ENST00000529307 VIRMAQ69YN4 1812 aaKnown RBP21.01■□□□□ 0.95
CAPRIN1-207ENST00000529307 RRP9O43818 475 aaKnown RBP21.01■□□□□ 0.95
CAPRIN1-207ENST00000529307 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.01■□□□□ 0.952e-7■■□□□ 13.8
CAPRIN1-207ENST00000529307 KDM6AO15550 1401 aaPredicted RBP21■□□□□ 0.95
CAPRIN1-207ENST00000529307 PHKG2P15735 406 aa21■□□□□ 0.95
CAPRIN1-207ENST00000529307 HDAC1Q13547 482 aaPredicted RBP21■□□□□ 0.95
CAPRIN1-207ENST00000529307 INTS3Q68E01 1043 aaKnown RBP21■□□□□ 0.95
CAPRIN1-207ENST00000529307 SOS1Q07889 1333 aaPredicted RBP20.99■□□□□ 0.95
CAPRIN1-207ENST00000529307 CCDC30Q5VVM6 783 aa20.99■□□□□ 0.95
CAPRIN1-207ENST00000529307 C1orf115Q9H7X2 142 aa20.99■□□□□ 0.95
CAPRIN1-207ENST00000529307 SPG7Q9UQ90 795 aa20.99■□□□□ 0.95
CAPRIN1-207ENST00000529307 CYP27B1O15528 508 aa20.98■□□□□ 0.95
CAPRIN1-207ENST00000529307 TOM1L2Q6ZVM7 507 aa20.98■□□□□ 0.95
CAPRIN1-207ENST00000529307 STK31Q9BXU1 1019 aa20.98■□□□□ 0.95
CAPRIN1-207ENST00000529307 SIPA1L3O60292 1781 aaPredicted RBP20.97■□□□□ 0.95
CAPRIN1-207ENST00000529307 F6X3S4 739 aa20.97■□□□□ 0.95
CAPRIN1-207ENST00000529307 HSP90AA2PQ14568 343 aaPredicted RBP20.97■□□□□ 0.95
CAPRIN1-207ENST00000529307 PDZRN3Q9UPQ7 1066 aa20.97■□□□□ 0.95
CAPRIN1-207ENST00000529307 AHDC1Q5TGY3 1603 aaPredicted RBP20.96■□□□□ 0.95
CAPRIN1-207ENST00000529307 HDGFL1Q5TGJ6 251 aa20.96■□□□□ 0.95
CAPRIN1-207ENST00000529307 PKD1L3Q7Z443 1732 aa20.96■□□□□ 0.95
CAPRIN1-207ENST00000529307 PLEKHG2Q9H7P9 1386 aa20.96■□□□□ 0.95
CAPRIN1-207ENST00000529307 IFNL2Q8IZJ0 200 aa20.95■□□□□ 0.95
CAPRIN1-207ENST00000529307 FLIIQ13045 1269 aa20.95■□□□□ 0.94
CAPRIN1-207ENST00000529307 LARP1Q6PKG0 1096 aaKnown RBP20.95■□□□□ 0.94
CAPRIN1-207ENST00000529307 STRN4Q9NRL3 753 aa20.95■□□□□ 0.94
CAPRIN1-207ENST00000529307 HEG1Q9ULI3 1381 aa20.94■□□□□ 0.94
CAPRIN1-207ENST00000529307 SCN11AQ9UI33 1791 aa20.93■□□□□ 0.94
CAPRIN1-207ENST00000529307 EIF2S2P20042 333 aaKnown RBP20.93■□□□□ 0.94
CAPRIN1-207ENST00000529307 SIRT2Q8IXJ6 389 aa20.93■□□□□ 0.94
CAPRIN1-207ENST00000529307 CHMP4BQ9H444 224 aaKnown RBP20.93■□□□□ 0.94
CAPRIN1-207ENST00000529307 SLC52A2Q9HAB3 445 aa20.93■□□□□ 0.94
CAPRIN1-207ENST00000529307 HOXB7P09629 217 aa20.93■□□□□ 0.94
CAPRIN1-207ENST00000529307 SMC5Q8IY18 1101 aa20.93■□□□□ 0.94
CAPRIN1-207ENST00000529307 CARD10Q9BWT7 1032 aa20.93■□□□□ 0.94
CAPRIN1-207ENST00000529307 PRAMEF22A3QJZ6 481 aa20.92■□□□□ 0.94
CAPRIN1-207ENST00000529307 NFATC2IPQ8NCF5 419 aa20.92■□□□□ 0.94
CAPRIN1-207ENST00000529307 PHAXQ9H814 394 aaKnown RBP20.92■□□□□ 0.94
CAPRIN1-207ENST00000529307 GIGYF1O75420 1035 aaPredicted RBP20.9■□□□□ 0.94
CAPRIN1-207ENST00000529307 SLC39A6Q13433 755 aa20.9■□□□□ 0.94
CAPRIN1-207ENST00000529307 FKBP5Q13451 457 aaPredicted RBP20.9■□□□□ 0.94
CAPRIN1-207ENST00000529307 SLC4A10Q6U841 1118 aa20.9■□□□□ 0.94
CAPRIN1-207ENST00000529307 DCAF5Q96JK2 942 aa20.9■□□□□ 0.94
CAPRIN1-207ENST00000529307 EVA1CP58658 441 aa20.9■□□□□ 0.94
CAPRIN1-207ENST00000529307 MEIS3Q99687 375 aa20.9■□□□□ 0.94
CAPRIN1-207ENST00000529307 CHPF2Q9P2E5 772 aa20.9■□□□□ 0.94
CAPRIN1-207ENST00000529307 RRAGDQ9NQL2 400 aaPredicted RBP20.89■□□□□ 0.94
CAPRIN1-207ENST00000529307 BTG4Q9NY30 223 aa20.89■□□□□ 0.94
CAPRIN1-207ENST00000529307 MRC1P22897 1456 aa20.88■□□□□ 0.93
CAPRIN1-207ENST00000529307 C8orf34Q49A92 452 aa20.88■□□□□ 0.93
CAPRIN1-207ENST00000529307 ZNF790Q6PG37 636 aa20.88■□□□□ 0.93
CAPRIN1-207ENST00000529307 ZCRB1Q8TBF4 217 aaKnown RBP20.88■□□□□ 0.93
CAPRIN1-207ENST00000529307 PARP4Q9UKK3 1724 aaKnown RBP20.88■□□□□ 0.93
CAPRIN1-207ENST00000529307 CACNA1FO60840 1977 aa20.88■□□□□ 0.93
CAPRIN1-207ENST00000529307 COL22A1Q8NFW1 1626 aaPredicted RBP20.88■□□□□ 0.93
CAPRIN1-207ENST00000529307 ANXA1P04083 346 aa20.88■□□□□ 0.93
CAPRIN1-207ENST00000529307 HSP90AA1P07900 732 aaKnown RBP20.88■□□□□ 0.93
CAPRIN1-207ENST00000529307 IL2RBP14784 551 aa20.88■□□□□ 0.93
CAPRIN1-207ENST00000529307 CCT4P50991 539 aaKnown RBP20.87■□□□□ 0.93
CAPRIN1-207ENST00000529307 ATP10DQ9P241 1426 aa20.87■□□□□ 0.93
CAPRIN1-207ENST00000529307 COL16A1Q07092 1604 aaPredicted RBP20.86■□□□□ 0.93
CAPRIN1-207ENST00000529307 PCDH11XQ9BZA7 1347 aa20.85■□□□□ 0.93
CAPRIN1-207ENST00000529307 PCDH11YQ9BZA8 1340 aa20.85■□□□□ 0.93
CAPRIN1-207ENST00000529307 HSP90AB1P08238 724 aaKnown RBP20.85■□□□□ 0.93
CAPRIN1-207ENST00000529307 FAM161AQ3B820 660 aa20.85■□□□□ 0.93
CAPRIN1-207ENST00000529307 PROSER3Q2NL68 480 aa20.84■□□□□ 0.93
CAPRIN1-207ENST00000529307 NUCB1Q02818 461 aa20.83■□□□□ 0.93
CAPRIN1-207ENST00000529307 COL14A1Q05707 1796 aaKnown RBP20.83■□□□□ 0.92
CAPRIN1-207ENST00000529307 SHANK3Q9BYB0 1731 aa20.83■□□□□ 0.92
CAPRIN1-207ENST00000529307 PIP4K2BP78356 416 aa20.83■□□□□ 0.92
CAPRIN1-207ENST00000529307 CEP85Q6P2H3 762 aa20.83■□□□□ 0.92
CAPRIN1-207ENST00000529307 ZNF496Q96IT1 587 aaPredicted RBP20.83■□□□□ 0.92
CAPRIN1-207ENST00000529307 PHLPP1O60346 1717 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms