RNA–Protein interactions for RNA: ENST00000529251.1

TCN1-202, Transcript of transcobalamin 1, humanhuman

TSL 3

Gene TCN1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-202ENST00000529251 DBN1Q16643 649 aa7.55□□□□□ -1.2
TCN1-202ENST00000529251 TAS1R3Q7RTX0 852 aa7.55□□□□□ -1.2
TCN1-202ENST00000529251 TRIM22Q8IYM9 498 aa7.55□□□□□ -1.2
TCN1-202ENST00000529251 GMCL1Q96IK5 515 aa7.55□□□□□ -1.2
TCN1-202ENST00000529251 WASLO00401 505 aaPredicted RBP7.54□□□□□ -1.2
TCN1-202ENST00000529251 SLURP2P0DP57 97 aa7.54□□□□□ -1.2
TCN1-202ENST00000529251 SCNN1DP51172 638 aa7.54□□□□□ -1.2
TCN1-202ENST00000529251 ESCO1Q5FWF5 840 aa7.54□□□□□ -1.2
TCN1-202ENST00000529251 WWC1Q8IX03 1113 aa7.54□□□□□ -1.2
TCN1-202ENST00000529251 SIRT1Q96EB6 747 aa7.54□□□□□ -1.2
TCN1-202ENST00000529251 CDCA8Q53HL2 280 aa7.53□□□□□ -1.2
TCN1-202ENST00000529251 ZSCAN10Q96SZ4 725 aaPredicted RBP7.53□□□□□ -1.2
TCN1-202ENST00000529251 TIMMDC1Q9NPL8 285 aa7.53□□□□□ -1.2
TCN1-202ENST00000529251 THBS1P07996 1170 aa7.52□□□□□ -1.21
TCN1-202ENST00000529251 RIPOR1Q6ZS17 1223 aa7.52□□□□□ -1.21
TCN1-202ENST00000529251 TBC1D9Q6ZT07 1266 aa7.52□□□□□ -1.21
TCN1-202ENST00000529251 NFATC2IPQ8NCF5 419 aa7.52□□□□□ -1.21
TCN1-202ENST00000529251 GAS2L1Q99501 681 aaPredicted RBP7.52□□□□□ -1.21
TCN1-202ENST00000529251 INHAP05111 366 aa7.51□□□□□ -1.21
TCN1-202ENST00000529251 GDF10P55107 478 aa7.51□□□□□ -1.21
TCN1-202ENST00000529251 C4orf17Q53FE4 359 aa7.51□□□□□ -1.21
TCN1-202ENST00000529251 PPARGC1BQ86YN6 1023 aaKnown RBP7.51□□□□□ -1.21
TCN1-202ENST00000529251 PCDHGA11Q9Y5H2 935 aa7.51□□□□□ -1.21
TCN1-202ENST00000529251 F11P03951 625 aa7.5□□□□□ -1.21
TCN1-202ENST00000529251 PHKA2P46019 1235 aa7.5□□□□□ -1.21
TCN1-202ENST00000529251 TLR1Q15399 786 aa7.5□□□□□ -1.21
TCN1-202ENST00000529251 ZNF385CQ66K41 422 aaPredicted RBP7.5□□□□□ -1.21
TCN1-202ENST00000529251 TMEM214Q6NUQ4 689 aaKnown RBP7.5□□□□□ -1.21
TCN1-202ENST00000529251 DEPDC4Q8N2C3 294 aa7.5□□□□□ -1.21
TCN1-202ENST00000529251 WHAMMQ8TF30 809 aa7.5□□□□□ -1.21
TCN1-202ENST00000529251 CCDC97Q96F63 343 aaPredicted RBP7.5□□□□□ -1.21
TCN1-202ENST00000529251 TFIP11Q9UBB9 837 aaKnown RBP7.5□□□□□ -1.21
TCN1-202ENST00000529251 A0A1B0GTH6 734 aa7.49□□□□□ -1.21
TCN1-202ENST00000529251 TMEM229AB2RXF0 380 aa7.49□□□□□ -1.21
TCN1-202ENST00000529251 H7C1W4 665 aa7.49□□□□□ -1.21
TCN1-202ENST00000529251 GPR25O00155 361 aa7.49□□□□□ -1.21
TCN1-202ENST00000529251 SKIP12755 728 aa7.49□□□□□ -1.21
TCN1-202ENST00000529251 GNASQ5JWF2 1037 aa7.49□□□□□ -1.21
TCN1-202ENST00000529251 CFAP70Q5T0N1 1121 aa7.49□□□□□ -1.21
TCN1-202ENST00000529251 ZNF295-AS1Q8N0V1 137 aa7.49□□□□□ -1.21
TCN1-202ENST00000529251 RHBDD1Q8TEB9 315 aa7.49□□□□□ -1.21
TCN1-202ENST00000529251 GTPBP3Q969Y2 492 aaKnown RBP7.49□□□□□ -1.21
TCN1-202ENST00000529251 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.48□□□□□ -1.21
TCN1-202ENST00000529251 PALM3A6NDB9 673 aaPredicted RBP7.48□□□□□ -1.21
TCN1-202ENST00000529251 ADAMTS2O95450 1211 aa7.48□□□□□ -1.21
TCN1-202ENST00000529251 LMOD1P29536 600 aaPredicted RBP7.48□□□□□ -1.21
TCN1-202ENST00000529251 SRSF11Q05519 484 aaKnown RBP7.48□□□□□ -1.21
TCN1-202ENST00000529251 NCOA4Q13772 614 aa7.48□□□□□ -1.21
TCN1-202ENST00000529251 SLC4A9Q96Q91 983 aa7.48□□□□□ -1.21
TCN1-202ENST00000529251 PPP1R12CQ9BZL4 782 aa7.48□□□□□ -1.21
TCN1-202ENST00000529251 GPAMQ9HCL2 828 aa7.48□□□□□ -1.21
TCN1-202ENST00000529251 CARNS1A5YM72 827 aa7.47□□□□□ -1.21
TCN1-202ENST00000529251 USP17L5A8MUK1 530 aa7.47□□□□□ -1.21
TCN1-202ENST00000529251 LZTS3O60299 673 aaPredicted RBP7.47□□□□□ -1.21
TCN1-202ENST00000529251 SMTNP53814 917 aa7.47□□□□□ -1.21
TCN1-202ENST00000529251 UBAP2LQ14157 1087 aaKnown RBP7.47□□□□□ -1.21
TCN1-202ENST00000529251 EML3Q32P44 896 aa7.47□□□□□ -1.21
TCN1-202ENST00000529251 NUCKS1Q9H1E3 243 aaKnown RBP7.47□□□□□ -1.21
TCN1-202ENST00000529251 MBIPQ9NS73 344 aa7.47□□□□□ -1.21
TCN1-202ENST00000529251 IQSEC3Q9UPP2 1182 aaPredicted RBP7.47□□□□□ -1.21
TCN1-202ENST00000529251 ARHGEF15O94989 841 aa7.46□□□□□ -1.22
TCN1-202ENST00000529251 MSX1P28360 303 aa7.46□□□□□ -1.22
TCN1-202ENST00000529251 GTF2E1P29083 439 aaPredicted RBP7.46□□□□□ -1.22
TCN1-202ENST00000529251 MTFR1Q15390 333 aa7.46□□□□□ -1.22
TCN1-202ENST00000529251 FOXR1Q6PIV2 292 aa7.46□□□□□ -1.22
TCN1-202ENST00000529251 SERPINA10Q9UK55 444 aa7.46□□□□□ -1.22
TCN1-202ENST00000529251 NOD1Q9Y239 953 aa7.46□□□□□ -1.22
TCN1-202ENST00000529251 GTF2IP78347 998 aa7.45□□□□□ -1.22
TCN1-202ENST00000529251 LYPD4Q6UWN0 246 aa7.45□□□□□ -1.22
TCN1-202ENST00000529251 SVOPQ8N4V2 548 aa7.45□□□□□ -1.22
TCN1-202ENST00000529251 SERTAD1Q9UHV2 236 aa7.45□□□□□ -1.22
TCN1-202ENST00000529251 ADAMTS8Q9UP79 889 aa7.45□□□□□ -1.22
TCN1-202ENST00000529251 A6NJY4 79 aa7.44□□□□□ -1.22
TCN1-202ENST00000529251 ATP4AP20648 1035 aa7.44□□□□□ -1.22
TCN1-202ENST00000529251 PLA2G4AP47712 749 aa7.44□□□□□ -1.22
TCN1-202ENST00000529251 GSK3AP49840 483 aa7.44□□□□□ -1.22
TCN1-202ENST00000529251 PLEKHM2Q8IWE5 1019 aa7.44□□□□□ -1.22
TCN1-202ENST00000529251 RUBCNLQ9H714 662 aa7.44□□□□□ -1.22
TCN1-202ENST00000529251 MAFBQ9Y5Q3 323 aaPredicted RBP7.44□□□□□ -1.22
TCN1-202ENST00000529251 USP3Q9Y6I4 520 aa7.44□□□□□ -1.22
TCN1-202ENST00000529251 IGF1RP08069 1367 aa7.44□□□□□ -1.22
TCN1-202ENST00000529251 USP17L3A6NCW0 530 aa7.43□□□□□ -1.22
TCN1-202ENST00000529251 USP17L4A6NCW7 530 aa7.43□□□□□ -1.22
TCN1-202ENST00000529251 CDK2AP1O14519 115 aa7.43□□□□□ -1.22
TCN1-202ENST00000529251 LBRQ14739 615 aaKnown RBP7.43□□□□□ -1.22
TCN1-202ENST00000529251 USP17L2Q6R6M4 530 aa7.43□□□□□ -1.22
TCN1-202ENST00000529251 USP17L1Q7RTZ2 530 aa7.43□□□□□ -1.22
TCN1-202ENST00000529251 TRERF1Q96PN7 1200 aa7.43□□□□□ -1.22
TCN1-202ENST00000529251 CRISPLD1Q9H336 500 aa7.43□□□□□ -1.22
TCN1-202ENST00000529251 ATP9BO43861 1147 aa7.42□□□□□ -1.22
TCN1-202ENST00000529251 CELA2BP08218 269 aaPredicted RBP7.42□□□□□ -1.22
TCN1-202ENST00000529251 EPHA4P54764 986 aa7.42□□□□□ -1.22
TCN1-202ENST00000529251 CFHR5Q9BXR6 569 aa7.42□□□□□ -1.22
TCN1-202ENST00000529251 NIFKQ9BYG3 293 aaKnown RBP7.42□□□□□ -1.22
TCN1-202ENST00000529251 ZNF358Q9NW07 568 aa7.42□□□□□ -1.22
TCN1-202ENST00000529251 MX2P20592 715 aa7.41□□□□□ -1.22
TCN1-202ENST00000529251 SRPK2P78362 688 aaKnown RBP7.41□□□□□ -1.22
TCN1-202ENST00000529251 KCNMA1Q12791 1236 aa7.41□□□□□ -1.22
TCN1-202ENST00000529251 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.41□□□□□ -1.22
TCN1-202ENST00000529251 C1orf216Q8TAB5 229 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms