RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 RTL1A6NKG5 1358 aa8.52□□□□□ -1.05
NUP98-215ENST00000529063 C1QTNF8P60827 252 aa8.52□□□□□ -1.05
NUP98-215ENST00000529063 SLC16A10Q8TF71 515 aa8.52□□□□□ -1.05
NUP98-215ENST00000529063 LTV1Q96GA3 475 aaPredicted RBP8.52□□□□□ -1.05
NUP98-215ENST00000529063 PUS7Q96PZ0 661 aaKnown RBP8.52□□□□□ -1.05
NUP98-215ENST00000529063 TERF2IPQ9NYB0 399 aa8.52□□□□□ -1.05
NUP98-215ENST00000529063 CEP350Q5VT06 3117 aa8.52□□□□□ -1.05
NUP98-215ENST00000529063 UBR3Q6ZT12 1888 aa8.51□□□□□ -1.05
NUP98-215ENST00000529063 SENP3-EIF4A1A0A087X0R7 540 aa8.51□□□□□ -1.05
NUP98-215ENST00000529063 PRIM1P49642 420 aaKnown RBP8.51□□□□□ -1.05
NUP98-215ENST00000529063 PDAP1Q13442 181 aaKnown RBP8.51□□□□□ -1.05
NUP98-215ENST00000529063 TSPYL2Q9H2G4 693 aaPredicted RBP8.51□□□□□ -1.05
NUP98-215ENST00000529063 MAP2P11137 1827 aaKnown RBP8.51□□□□□ -1.05
NUP98-215ENST00000529063 C4BP0C0L5 1744 aa8.51□□□□□ -1.05
NUP98-215ENST00000529063 PITPNM1O00562 1244 aa8.5□□□□□ -1.05
NUP98-215ENST00000529063 YBX3P16989 372 aaKnown RBP eCLIP8.5□□□□□ -1.054e-6■□□□□ 9.7
NUP98-215ENST00000529063 GPR162Q16538 588 aa8.5□□□□□ -1.05
NUP98-215ENST00000529063 SYTL4Q96C24 671 aaPredicted RBP8.5□□□□□ -1.05
NUP98-215ENST00000529063 NCAPD2Q15021 1401 aa8.49□□□□□ -1.05
NUP98-215ENST00000529063 RRS1Q15050 365 aaKnown RBP8.49□□□□□ -1.05
NUP98-215ENST00000529063 NBPF6Q5VWK0 638 aa8.49□□□□□ -1.05
NUP98-215ENST00000529063 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.49□□□□□ -1.05
NUP98-215ENST00000529063 COL23A1Q86Y22 540 aaPredicted RBP8.49□□□□□ -1.05
NUP98-215ENST00000529063 USHBP1Q8N6Y0 703 aa8.49□□□□□ -1.05
NUP98-215ENST00000529063 ZCRB1Q8TBF4 217 aaKnown RBP8.49□□□□□ -1.05
NUP98-215ENST00000529063 COG3Q96JB2 828 aa8.49□□□□□ -1.05
NUP98-215ENST00000529063 NBPF4Q96M43 638 aa8.49□□□□□ -1.05
NUP98-215ENST00000529063 TFCP2L1Q9NZI6 479 aa8.49□□□□□ -1.05
NUP98-215ENST00000529063 CCNL1Q9UK58 526 aaPredicted RBP8.49□□□□□ -1.05
NUP98-215ENST00000529063 KIAA1551Q9HCM1 1747 aa8.49□□□□□ -1.05
NUP98-215ENST00000529063 TONSLQ96HA7 1378 aa8.48□□□□□ -1.05
NUP98-215ENST00000529063 ST20-MTHFSA0A0A6YYL1 179 aa8.48□□□□□ -1.05
NUP98-215ENST00000529063 POLD1P28340 1107 aa8.48□□□□□ -1.05
NUP98-215ENST00000529063 ADCY9O60503 1353 aa8.48□□□□□ -1.05
NUP98-215ENST00000529063 FYB1O15117 783 aa8.47□□□□□ -1.05
NUP98-215ENST00000529063 AMPHP49418 695 aa8.47□□□□□ -1.05
NUP98-215ENST00000529063 MSL1Q68DK7 614 aa8.47□□□□□ -1.05
NUP98-215ENST00000529063 AMIGO3Q86WK7 504 aa8.47□□□□□ -1.05
NUP98-215ENST00000529063 PELP1Q8IZL8 1130 aaKnown RBP8.47□□□□□ -1.05
NUP98-215ENST00000529063 INSRP06213 1382 aa8.47□□□□□ -1.05
NUP98-215ENST00000529063 PALLDQ8WX93 1383 aa8.47□□□□□ -1.05
NUP98-215ENST00000529063 USP47Q96K76 1375 aa8.47□□□□□ -1.05
NUP98-215ENST00000529063 ATP10DQ9P241 1426 aa8.46□□□□□ -1.05
NUP98-215ENST00000529063 GIGYF1O75420 1035 aaPredicted RBP8.46□□□□□ -1.06
NUP98-215ENST00000529063 GGNBP2Q9H3C7 697 aa8.46□□□□□ -1.06
NUP98-215ENST00000529063 PCDHB8Q9UN66 801 aa8.46□□□□□ -1.06
NUP98-215ENST00000529063 PCDHB13Q9Y5F0 798 aa8.46□□□□□ -1.06
NUP98-215ENST00000529063 CICQ96RK0 1608 aaPredicted RBP8.46□□□□□ -1.06
NUP98-215ENST00000529063 SMG6Q86US8 1419 aaKnown RBP8.46□□□□□ -1.06
NUP98-215ENST00000529063 KIF13BQ9NQT8 1826 aa8.45□□□□□ -1.06
NUP98-215ENST00000529063 CYP27B1O15528 508 aa8.45□□□□□ -1.06
NUP98-215ENST00000529063 HSP90AB2PQ58FF8 381 aa8.45□□□□□ -1.06
NUP98-215ENST00000529063 CGNL1Q0VF96 1302 aa8.45□□□□□ -1.06
NUP98-215ENST00000529063 PCDH11XQ9BZA7 1347 aa8.45□□□□□ -1.06
NUP98-215ENST00000529063 PCDH11YQ9BZA8 1340 aa8.45□□□□□ -1.06
NUP98-215ENST00000529063 FLT4P35916 1363 aa8.45□□□□□ -1.06
NUP98-215ENST00000529063 PSEN1P49768 467 aa8.44□□□□□ -1.06
NUP98-215ENST00000529063 CHADLQ6NUI6 762 aa8.44□□□□□ -1.06
NUP98-215ENST00000529063 SMIM5Q71RC9 77 aa8.44□□□□□ -1.06
NUP98-215ENST00000529063 MFRPQ9BY79 579 aa8.44□□□□□ -1.06
NUP98-215ENST00000529063 KIF24Q5T7B8 1368 aa8.44□□□□□ -1.06
NUP98-215ENST00000529063 COL5A3P25940 1745 aaPredicted RBP8.43□□□□□ -1.06
NUP98-215ENST00000529063 TATP17735 454 aaPredicted RBP8.43□□□□□ -1.06
NUP98-215ENST00000529063 RAPGEF4Q8WZA2 1011 aa8.43□□□□□ -1.06
NUP98-215ENST00000529063 EMILIN1Q9Y6C2 1016 aa8.43□□□□□ -1.06
NUP98-215ENST00000529063 BRCA1P38398 1863 aaKnown RBP8.43□□□□□ -1.06
NUP98-215ENST00000529063 GRIN3BO60391 1043 aa8.42□□□□□ -1.06
NUP98-215ENST00000529063 MPRIPQ6WCQ1 1025 aa8.42□□□□□ -1.06
NUP98-215ENST00000529063 CARD14Q9BXL6 1004 aa8.42□□□□□ -1.06
NUP98-215ENST00000529063 CD2APQ9Y5K6 639 aa8.42□□□□□ -1.06
NUP98-215ENST00000529063 NSD3Q9BZ95 1437 aa8.42□□□□□ -1.06
NUP98-215ENST00000529063 ZNF831Q5JPB2 1677 aa8.42□□□□□ -1.06
NUP98-215ENST00000529063 C4AP0C0L4 1744 aa8.42□□□□□ -1.06
NUP98-215ENST00000529063 N4BP2Q86UW6 1770 aaPredicted RBP8.42□□□□□ -1.06
NUP98-215ENST00000529063 ZNF579Q8NAF0 562 aaKnown RBP8.41□□□□□ -1.06
NUP98-215ENST00000529063 LINC00116Q8NCU8 138 aa8.41□□□□□ -1.06
NUP98-215ENST00000529063 PIGBQ92521 554 aa8.41□□□□□ -1.06
NUP98-215ENST00000529063 ARHGEF1Q92888 912 aaKnown RBP8.41□□□□□ -1.06
NUP98-215ENST00000529063 FARP1Q9Y4F1 1045 aaPredicted RBP8.41□□□□□ -1.06
NUP98-215ENST00000529063 PXDNLA1KZ92 1463 aa8.4□□□□□ -1.06
NUP98-215ENST00000529063 KDRP35968 1356 aa8.4□□□□□ -1.06
NUP98-215ENST00000529063 IGSF1Q8N6C5 1336 aa8.4□□□□□ -1.06
NUP98-215ENST00000529063 TMF1P82094 1093 aa8.4□□□□□ -1.06
NUP98-215ENST00000529063 MYH14Q7Z406 1995 aaKnown RBP8.39□□□□□ -1.07
NUP98-215ENST00000529063 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.39□□□□□ -1.07
NUP98-215ENST00000529063 PHF14O94880 888 aa8.39□□□□□ -1.07
NUP98-215ENST00000529063 ITPK1Q13572 414 aa8.39□□□□□ -1.07
NUP98-215ENST00000529063 E2F4Q16254 413 aa8.39□□□□□ -1.07
NUP98-215ENST00000529063 FLAD1Q8NFF5 587 aa8.39□□□□□ -1.07
NUP98-215ENST00000529063 AK7Q96M32 723 aa8.39□□□□□ -1.07
NUP98-215ENST00000529063 WWC3Q9ULE0 1092 aa8.39□□□□□ -1.07
NUP98-215ENST00000529063 TJP1Q07157 1748 aa8.38□□□□□ -1.07
NUP98-215ENST00000529063 ADAMTS7Q9UKP4 1686 aa8.38□□□□□ -1.07
NUP98-215ENST00000529063 LOC102724428A0A0B4J2F2 783 aa8.38□□□□□ -1.07
NUP98-215ENST00000529063 PPP1R37O75864 691 aa8.38□□□□□ -1.07
NUP98-215ENST00000529063 SSFA2P28290 1259 aa8.38□□□□□ -1.07
NUP98-215ENST00000529063 BRPF1P55201 1214 aaPredicted RBP8.38□□□□□ -1.07
NUP98-215ENST00000529063 SIK1P57059 783 aa8.38□□□□□ -1.07
NUP98-215ENST00000529063 IFFO2Q5TF58 517 aa8.38□□□□□ -1.07
NUP98-215ENST00000529063 ZC3H15Q8WU90 426 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms