RNA–Protein interactions for RNA: ENST00000528253.3

PTP4A2-210, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 806 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-210ENST00000528253 RGPD2P0DJD1 1756 aa9.85□□□□□ -0.83
PTP4A2-210ENST00000528253 CCDC7Q96M83 1385 aa9.85□□□□□ -0.83
PTP4A2-210ENST00000528253 ERBB3P21860 1342 aa9.84□□□□□ -0.83
PTP4A2-210ENST00000528253 MAP3K19Q56UN5 1328 aa9.84□□□□□ -0.83
PTP4A2-210ENST00000528253 EXOC5O00471 708 aa9.84□□□□□ -0.83
PTP4A2-210ENST00000528253 PPP1R37O75864 691 aa9.84□□□□□ -0.83
PTP4A2-210ENST00000528253 HOXC9P31274 260 aa9.84□□□□□ -0.83
PTP4A2-210ENST00000528253 RRS1Q15050 365 aaKnown RBP9.84□□□□□ -0.83
PTP4A2-210ENST00000528253 ANKRD26Q9UPS8 1709 aa9.84□□□□□ -0.83
PTP4A2-210ENST00000528253 SBF2Q86WG5 1849 aa9.84□□□□□ -0.83
PTP4A2-210ENST00000528253 TIE1P35590 1138 aa9.83□□□□□ -0.84
PTP4A2-210ENST00000528253 BAG6P46379 1132 aa9.83□□□□□ -0.84
PTP4A2-210ENST00000528253 SEC24BO95487 1268 aa9.82□□□□□ -0.84
PTP4A2-210ENST00000528253 IL2RBP14784 551 aa9.82□□□□□ -0.84
PTP4A2-210ENST00000528253 KNSTRNQ9Y448 316 aa9.82□□□□□ -0.84
PTP4A2-210ENST00000528253 RTL1A6NKG5 1358 aa9.82□□□□□ -0.84
PTP4A2-210ENST00000528253 KIF7Q2M1P5 1343 aa9.82□□□□□ -0.84
PTP4A2-210ENST00000528253 KIF24Q5T7B8 1368 aa9.81□□□□□ -0.84
PTP4A2-210ENST00000528253 PPM1GO15355 546 aaPredicted RBP9.81□□□□□ -0.84
PTP4A2-210ENST00000528253 TRIM37O94972 964 aa9.81□□□□□ -0.84
PTP4A2-210ENST00000528253 KCNV2Q8TDN2 545 aa9.81□□□□□ -0.84
PTP4A2-210ENST00000528253 LRRC37A3O60309 1634 aa9.81□□□□□ -0.84
PTP4A2-210ENST00000528253 SMG6Q86US8 1419 aaKnown RBP9.81□□□□□ -0.84
PTP4A2-210ENST00000528253 TNNT2P45379 298 aaPredicted RBP9.8□□□□□ -0.84
PTP4A2-210ENST00000528253 DEFB132Q7Z7B7 95 aa9.8□□□□□ -0.84
PTP4A2-210ENST00000528253 TRPC6Q9Y210 931 aa9.8□□□□□ -0.84
PTP4A2-210ENST00000528253 OVOS2A0A0G2JMS6 1433 aa9.8□□□□□ -0.84
PTP4A2-210ENST00000528253 TNS1Q9HBL0 1735 aaKnown RBP9.79□□□□□ -0.84
PTP4A2-210ENST00000528253 NSD2O96028 1365 aa9.79□□□□□ -0.84
PTP4A2-210ENST00000528253 INSRP06213 1382 aa9.79□□□□□ -0.84
PTP4A2-210ENST00000528253 FLT4P35916 1363 aa9.79□□□□□ -0.84
PTP4A2-210ENST00000528253 APBA3O96018 575 aa9.79□□□□□ -0.84
PTP4A2-210ENST00000528253 HSP90AB2PQ58FF8 381 aa9.79□□□□□ -0.84
PTP4A2-210ENST00000528253 MORC1Q86VD1 984 aa9.79□□□□□ -0.84
PTP4A2-210ENST00000528253 MARCH10Q8NA82 808 aaPredicted RBP9.79□□□□□ -0.84
PTP4A2-210ENST00000528253 EN1Q05925 392 aaPredicted RBP9.78□□□□□ -0.84
PTP4A2-210ENST00000528253 MARVELD3Q96A59 401 aa9.78□□□□□ -0.84
PTP4A2-210ENST00000528253 MS4A4AQ96JQ5 239 aa9.78□□□□□ -0.84
PTP4A2-210ENST00000528253 EMILIN1Q9Y6C2 1016 aa9.78□□□□□ -0.84
PTP4A2-210ENST00000528253 DISP2A7MBM2 1401 aa9.78□□□□□ -0.84
PTP4A2-210ENST00000528253 PEAK1Q9H792 1746 aa9.78□□□□□ -0.84
PTP4A2-210ENST00000528253 TTLL13PA6NNM8 815 aa9.77□□□□□ -0.85
PTP4A2-210ENST00000528253 NBPF6Q5VWK0 638 aa9.77□□□□□ -0.85
PTP4A2-210ENST00000528253 RAPGEF4Q8WZA2 1011 aa9.77□□□□□ -0.85
PTP4A2-210ENST00000528253 NBPF4Q96M43 638 aa9.77□□□□□ -0.85
PTP4A2-210ENST00000528253 TMEM121BQ9BXQ6 578 aaPredicted RBP9.77□□□□□ -0.85
PTP4A2-210ENST00000528253 POLKQ9UBT6 870 aa9.77□□□□□ -0.85
PTP4A2-210ENST00000528253 WASHC2AQ641Q2 1341 aa9.77□□□□□ -0.85
PTP4A2-210ENST00000528253 TNS2Q63HR2 1409 aa9.76□□□□□ -0.85
PTP4A2-210ENST00000528253 TULP1O00294 542 aaPredicted RBP9.76□□□□□ -0.85
PTP4A2-210ENST00000528253 TATP17735 454 aaPredicted RBP9.76□□□□□ -0.85
PTP4A2-210ENST00000528253 PDE4AP27815 886 aa9.76□□□□□ -0.85
PTP4A2-210ENST00000528253 EZH2Q15910 746 aaKnown RBP9.76□□□□□ -0.85
PTP4A2-210ENST00000528253 E2F4Q16254 413 aa9.76□□□□□ -0.85
PTP4A2-210ENST00000528253 DDX54Q8TDD1 881 aaKnown RBP9.76□□□□□ -0.85
PTP4A2-210ENST00000528253 PER1O15534 1290 aaPredicted RBP9.75□□□□□ -0.85
PTP4A2-210ENST00000528253 USHBP1Q8N6Y0 703 aa9.75□□□□□ -0.85
PTP4A2-210ENST00000528253 ZCRB1Q8TBF4 217 aaKnown RBP9.75□□□□□ -0.85
PTP4A2-210ENST00000528253 ARHGEF1Q92888 912 aaKnown RBP9.75□□□□□ -0.85
PTP4A2-210ENST00000528253 CAMKK2Q96RR4 588 aa9.75□□□□□ -0.85
PTP4A2-210ENST00000528253 PARD3Q8TEW0 1356 aa9.75□□□□□ -0.85
PTP4A2-210ENST00000528253 BCL9O00512 1426 aa9.74□□□□□ -0.85
PTP4A2-210ENST00000528253 PLSCR1O15162 318 aa9.74□□□□□ -0.85
PTP4A2-210ENST00000528253 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.74□□□□□ -0.85
PTP4A2-210ENST00000528253 CC2D1BQ5T0F9 858 aaKnown RBP9.73□□□□□ -0.85
PTP4A2-210ENST00000528253 ACSBG1Q96GR2 724 aa9.73□□□□□ -0.85
PTP4A2-210ENST00000528253 NHSQ6T4R5 1651 aa9.72□□□□□ -0.85
PTP4A2-210ENST00000528253 CNGB1Q14028 1251 aaPredicted RBP9.72□□□□□ -0.85
PTP4A2-210ENST00000528253 EIF4A2Q14240 407 aaKnown RBP9.72□□□□□ -0.85
PTP4A2-210ENST00000528253 NBPF14Q5TI25 921 aa9.72□□□□□ -0.85
PTP4A2-210ENST00000528253 EYA1Q99502 592 aa9.72□□□□□ -0.85
PTP4A2-210ENST00000528253 LARP6Q9BRS8 491 aaKnown RBP9.72□□□□□ -0.85
PTP4A2-210ENST00000528253 SHANK3Q9BYB0 1731 aa9.72□□□□□ -0.85
PTP4A2-210ENST00000528253 RGPD3A6NKT7 1758 aaPredicted RBP9.72□□□□□ -0.85
PTP4A2-210ENST00000528253 RGPD4Q7Z3J3 1758 aa9.72□□□□□ -0.85
PTP4A2-210ENST00000528253 BTAF1O14981 1849 aa9.72□□□□□ -0.85
PTP4A2-210ENST00000528253 RREB1Q92766 1687 aa9.71□□□□□ -0.85
PTP4A2-210ENST00000528253 KCNQ2O43526 872 aa9.71□□□□□ -0.86
PTP4A2-210ENST00000528253 DDX27Q96GQ7 796 aaKnown RBP9.71□□□□□ -0.86
PTP4A2-210ENST00000528253 TRIM35Q9UPQ4 493 aa9.71□□□□□ -0.86
PTP4A2-210ENST00000528253 SPG7Q9UQ90 795 aa9.71□□□□□ -0.86
PTP4A2-210ENST00000528253 MEGF6O75095 1541 aa9.71□□□□□ -0.86
PTP4A2-210ENST00000528253 NUP188Q5SRE5 1749 aa9.7□□□□□ -0.86
PTP4A2-210ENST00000528253 ZEB1P37275 1124 aaPredicted RBP9.7□□□□□ -0.86
PTP4A2-210ENST00000528253 MTHFSP49914 203 aa9.7□□□□□ -0.86
PTP4A2-210ENST00000528253 PTF1AQ7RTS3 328 aa9.7□□□□□ -0.86
PTP4A2-210ENST00000528253 SYTL4Q96C24 671 aaPredicted RBP9.7□□□□□ -0.86
PTP4A2-210ENST00000528253 CRISPLD2Q9H0B8 497 aa9.7□□□□□ -0.86
PTP4A2-210ENST00000528253 PCDH11XQ9BZA7 1347 aa9.7□□□□□ -0.86
PTP4A2-210ENST00000528253 PCDH11YQ9BZA8 1340 aa9.7□□□□□ -0.86
PTP4A2-210ENST00000528253 NPC1L1Q9UHC9 1359 aa9.7□□□□□ -0.86
PTP4A2-210ENST00000528253 ITGB4P16144 1822 aa9.7□□□□□ -0.86
PTP4A2-210ENST00000528253 PSDA5PKW4 1024 aaPredicted RBP9.69□□□□□ -0.86
PTP4A2-210ENST00000528253 MFSD10Q14728 455 aa9.69□□□□□ -0.86
PTP4A2-210ENST00000528253 PKD1L3Q7Z443 1732 aa9.69□□□□□ -0.86
PTP4A2-210ENST00000528253 DOT1LQ8TEK3 1739 aa9.69□□□□□ -0.86
PTP4A2-210ENST00000528253 PRIM1P49642 420 aaKnown RBP9.68□□□□□ -0.86
PTP4A2-210ENST00000528253 R3HDM1Q15032 1099 aaKnown RBP9.68□□□□□ -0.86
PTP4A2-210ENST00000528253 KRTAP3-3Q9BYR6 98 aa9.68□□□□□ -0.86
PTP4A2-210ENST00000528253 KRTAP3-2Q9BYR7 98 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms