RNA–Protein interactions for RNA: ENST00000528021.5

SDHD-204, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3 BASIC

Gene SDHD, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-204ENST00000528021 USHBP1Q8N6Y0 703 aa16.46■□□□□ 0.23
SDHD-204ENST00000528021 ZCRB1Q8TBF4 217 aaKnown RBP16.46■□□□□ 0.23
SDHD-204ENST00000528021 OVOS2A0A0G2JMS6 1433 aa16.45■□□□□ 0.22
SDHD-204ENST00000528021 BCL11BQ9C0K0 894 aaPredicted RBP16.45■□□□□ 0.22
SDHD-204ENST00000528021 COL18A1P39060 1754 aa16.45■□□□□ 0.22
SDHD-204ENST00000528021 THSD7AQ9UPZ6 1657 aa16.44■□□□□ 0.22
SDHD-204ENST00000528021 DISP2A7MBM2 1401 aa16.44■□□□□ 0.22
SDHD-204ENST00000528021 USP54Q70EL1 1684 aa16.43■□□□□ 0.22
SDHD-204ENST00000528021 EIF4A2Q14240 407 aaKnown RBP16.41■□□□□ 0.22
SDHD-204ENST00000528021 EZH2Q15910 746 aaKnown RBP16.41■□□□□ 0.22
SDHD-204ENST00000528021 ACSBG1Q96GR2 724 aa16.41■□□□□ 0.22
SDHD-204ENST00000528021 EYA1Q99502 592 aa16.41■□□□□ 0.22
SDHD-204ENST00000528021 MYOM1P52179 1685 aa16.4■□□□□ 0.22
SDHD-204ENST00000528021 MARVELD3Q96A59 401 aa16.4■□□□□ 0.22
SDHD-204ENST00000528021 CAMKK2Q96RR4 588 aa16.4■□□□□ 0.22
SDHD-204ENST00000528021 TNS2Q63HR2 1409 aa16.39■□□□□ 0.21
SDHD-204ENST00000528021 MTHFSP49914 203 aa16.39■□□□□ 0.21
SDHD-204ENST00000528021 MMRN1Q13201 1228 aa16.39■□□□□ 0.21
SDHD-204ENST00000528021 NBPF14Q5TI25 921 aa16.39■□□□□ 0.21
SDHD-204ENST00000528021 SPNS2Q8IVW8 549 aa16.39■□□□□ 0.21
SDHD-204ENST00000528021 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.39■□□□□ 0.21
SDHD-204ENST00000528021 SPG7Q9UQ90 795 aa16.39■□□□□ 0.21
SDHD-204ENST00000528021 PLSCR1O15162 318 aa16.38■□□□□ 0.21
SDHD-204ENST00000528021 PSEN1P49768 467 aa16.38■□□□□ 0.21
SDHD-204ENST00000528021 BCL9O00512 1426 aa16.37■□□□□ 0.21
SDHD-204ENST00000528021 KCNQ2O43526 872 aa16.37■□□□□ 0.21
SDHD-204ENST00000528021 SYTL4Q96C24 671 aaPredicted RBP16.37■□□□□ 0.21
SDHD-204ENST00000528021 PARD3Q8TEW0 1356 aa16.37■□□□□ 0.21
SDHD-204ENST00000528021 NPC1L1Q9UHC9 1359 aa16.37■□□□□ 0.21
SDHD-204ENST00000528021 PTF1AQ7RTS3 328 aa16.35■□□□□ 0.21
SDHD-204ENST00000528021 PCDH11XQ9BZA7 1347 aa16.35■□□□□ 0.21
SDHD-204ENST00000528021 PCDH11YQ9BZA8 1340 aa16.35■□□□□ 0.21
SDHD-204ENST00000528021 BRWD3Q6RI45 1802 aa16.35■□□□□ 0.21
SDHD-204ENST00000528021 PRIM1P49642 420 aaKnown RBP16.34■□□□□ 0.21
SDHD-204ENST00000528021 DIAPH1O60610 1272 aaKnown RBP16.33■□□□□ 0.2
SDHD-204ENST00000528021 PLEKHO1Q53GL0 409 aaPredicted RBP16.33■□□□□ 0.2
SDHD-204ENST00000528021 CFAP53Q96M91 514 aa16.33■□□□□ 0.2
SDHD-204ENST00000528021 LTN1O94822 1766 aa16.33■□□□□ 0.2
SDHD-204ENST00000528021 IL13P35225 146 aa16.32■□□□□ 0.2
SDHD-204ENST00000528021 SULT6B1Q6IMI4 303 aa16.32■□□□□ 0.2
SDHD-204ENST00000528021 KIF20BQ96Q89 1820 aa16.32■□□□□ 0.2
SDHD-204ENST00000528021 PARP4Q9UKK3 1724 aaKnown RBP16.32■□□□□ 0.2
SDHD-204ENST00000528021 MEGF6O75095 1541 aa16.31■□□□□ 0.2
SDHD-204ENST00000528021 IGSF1Q8N6C5 1336 aa16.31■□□□□ 0.2
SDHD-204ENST00000528021 PSDA5PKW4 1024 aaPredicted RBP16.31■□□□□ 0.2
SDHD-204ENST00000528021 EMP3P54852 163 aa16.31■□□□□ 0.2
SDHD-204ENST00000528021 AMOTQ4VCS5 1084 aa16.31■□□□□ 0.2
SDHD-204ENST00000528021 IFNL2Q8IZJ0 200 aa16.31■□□□□ 0.2
SDHD-204ENST00000528021 CYP27B1O15528 508 aa16.3■□□□□ 0.2
SDHD-204ENST00000528021 PDAP1Q13442 181 aaKnown RBP16.3■□□□□ 0.2
SDHD-204ENST00000528021 R3HDM1Q15032 1099 aaKnown RBP16.3■□□□□ 0.2
SDHD-204ENST00000528021 TXNRD1Q16881 649 aa16.3■□□□□ 0.2
SDHD-204ENST00000528021 RGPD5Q99666 1765 aa16.29■□□□□ 0.2
SDHD-204ENST00000528021 DDX10Q13206 875 aaKnown RBP16.29■□□□□ 0.2
SDHD-204ENST00000528021 LRRC37A3O60309 1634 aa16.29■□□□□ 0.2
SDHD-204ENST00000528021 U2SURPO15042 1029 aaKnown RBP16.28■□□□□ 0.2
SDHD-204ENST00000528021 HSP90AB1P08238 724 aaKnown RBP16.28■□□□□ 0.2
SDHD-204ENST00000528021 MPRIPQ6WCQ1 1025 aa16.28■□□□□ 0.2
SDHD-204ENST00000528021 NUDCQ9Y266 331 aa16.28■□□□□ 0.2
SDHD-204ENST00000528021 C1orf141Q5JVX7 400 aa16.27■□□□□ 0.2
SDHD-204ENST00000528021 AEBP1Q8IUX7 1158 aa16.27■□□□□ 0.2
SDHD-204ENST00000528021 STK32BQ9NY57 414 aa16.27■□□□□ 0.2
SDHD-204ENST00000528021 PEAK1Q9H792 1746 aa16.27■□□□□ 0.19
SDHD-204ENST00000528021 EP400Q96L91 3159 aa16.27■□□□□ 0.19
SDHD-204ENST00000528021 PHKG2P15735 406 aa16.26■□□□□ 0.19
SDHD-204ENST00000528021 HMGB2P26583 209 aaKnown RBP16.26■□□□□ 0.19
SDHD-204ENST00000528021 PPP2R1AP30153 589 aa16.26■□□□□ 0.19
SDHD-204ENST00000528021 NKX1-1Q15270 411 aaPredicted RBP16.26■□□□□ 0.19
SDHD-204ENST00000528021 ZNF530Q6P9A1 599 aaPredicted RBP16.26■□□□□ 0.19
SDHD-204ENST00000528021 HMOX1P09601 288 aa16.25■□□□□ 0.19
SDHD-204ENST00000528021 SLC27A3Q5K4L6 730 aa16.25■□□□□ 0.19
SDHD-204ENST00000528021 NCAPD2Q15021 1401 aa16.25■□□□□ 0.19
SDHD-204ENST00000528021 RGPD1P0DJD0 1748 aa16.25■□□□□ 0.19
SDHD-204ENST00000528021 FAM208AQ9UK61 1670 aaKnown RBP16.24■□□□□ 0.19
SDHD-204ENST00000528021 SMARCC1Q92922 1105 aaPredicted RBP16.24■□□□□ 0.19
SDHD-204ENST00000528021 TMOD3Q9NYL9 352 aa16.24■□□□□ 0.19
SDHD-204ENST00000528021 PLEKHG2Q9H7P9 1386 aa16.24■□□□□ 0.19
SDHD-204ENST00000528021 DCAF5Q96JK2 942 aa16.23■□□□□ 0.19
SDHD-204ENST00000528021 RALBP1Q15311 655 aa16.22■□□□□ 0.19
SDHD-204ENST00000528021 ERVV-2B6SEH9 535 aa16.21■□□□□ 0.19
SDHD-204ENST00000528021 CABP4P57796 275 aa16.21■□□□□ 0.19
SDHD-204ENST00000528021 SLC15A2Q16348 729 aa16.21■□□□□ 0.19
SDHD-204ENST00000528021 PIGBQ92521 554 aa16.21■□□□□ 0.19
SDHD-204ENST00000528021 CCNL1Q9UK58 526 aaPredicted RBP16.21■□□□□ 0.19
SDHD-204ENST00000528021 G3V3G9 751 aa16.2■□□□□ 0.18
SDHD-204ENST00000528021 U2AF1L5P0DN76 240 aaPredicted RBP16.2■□□□□ 0.18
SDHD-204ENST00000528021 U2AF1Q01081 240 aaKnown RBP eCLIP16.2■□□□□ 0.18
SDHD-204ENST00000528021 KDRP35968 1356 aa16.19■□□□□ 0.18
SDHD-204ENST00000528021 AKAP4Q5JQC9 854 aa16.19■□□□□ 0.18
SDHD-204ENST00000528021 HS3ST6Q96QI5 342 aa16.19■□□□□ 0.18
SDHD-204ENST00000528021 SPOCK2Q92563 424 aa16.18■□□□□ 0.18
SDHD-204ENST00000528021 ANO8Q9HCE9 1232 aaPredicted RBP16.18■□□□□ 0.18
SDHD-204ENST00000528021 LRRC4BQ9NT99 713 aa16.18■□□□□ 0.18
SDHD-204ENST00000528021 ANKRD26Q9UPS8 1709 aa16.18■□□□□ 0.18
SDHD-204ENST00000528021 FAM205CA6NFA0 338 aa16.17■□□□□ 0.18
SDHD-204ENST00000528021 NEFMP07197 916 aa16.17■□□□□ 0.18
SDHD-204ENST00000528021 GAS2L2Q8NHY3 880 aa16.17■□□□□ 0.18
SDHD-204ENST00000528021 KCNQ4P56696 695 aa16.16■□□□□ 0.18
SDHD-204ENST00000528021 MTHFSDQ2M296 383 aaKnown RBP16.16■□□□□ 0.18
SDHD-204ENST00000528021 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms