RNA–Protein interactions for RNA: ENST00000527656.1

LRP4-202, Transcript of LDL receptor related protein 4, humanhuman

TSL 2

Gene LRP4, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4-202ENST00000527656 LINC00116Q8NCU8 138 aa21.08■□□□□ 0.97
LRP4-202ENST00000527656 UBR2Q8IWV8 1755 aa21.08■□□□□ 0.96
LRP4-202ENST00000527656 LOC102724428A0A0B4J2F2 783 aa21.07■□□□□ 0.96
LRP4-202ENST00000527656 DIAPH1O60610 1272 aaKnown RBP21.07■□□□□ 0.96
LRP4-202ENST00000527656 SIK1P57059 783 aa21.07■□□□□ 0.96
LRP4-202ENST00000527656 SMARCC1Q92922 1105 aaPredicted RBP21.07■□□□□ 0.96
LRP4-202ENST00000527656 DCAF5Q96JK2 942 aa21.07■□□□□ 0.96
LRP4-202ENST00000527656 SLC4A9Q96Q91 983 aa21.07■□□□□ 0.96
LRP4-202ENST00000527656 ERVV-2B6SEH9 535 aa21.05■□□□□ 0.96
LRP4-202ENST00000527656 FHDC1Q9C0D6 1143 aaPredicted RBP21.04■□□□□ 0.96
LRP4-202ENST00000527656 HSP90AB1P08238 724 aaKnown RBP21.03■□□□□ 0.96
LRP4-202ENST00000527656 PPP2R1AP30153 589 aa21.02■□□□□ 0.96
LRP4-202ENST00000527656 MTHFSDQ2M296 383 aaKnown RBP21.02■□□□□ 0.96
LRP4-202ENST00000527656 C1orf141Q5JVX7 400 aa21.02■□□□□ 0.96
LRP4-202ENST00000527656 SLC16A10Q8TF71 515 aa21.02■□□□□ 0.96
LRP4-202ENST00000527656 DLG5Q8TDM6 1919 aa21.02■□□□□ 0.95
LRP4-202ENST00000527656 KCPQ6ZWJ8 1503 aa21.01■□□□□ 0.95
LRP4-202ENST00000527656 ARXQ96QS3 562 aa21.01■□□□□ 0.95
LRP4-202ENST00000527656 MAP3K5Q99683 1374 aa21■□□□□ 0.95
LRP4-202ENST00000527656 ATP6V1AP38606 617 aa21■□□□□ 0.95
LRP4-202ENST00000527656 AKAP4Q5JQC9 854 aa21■□□□□ 0.95
LRP4-202ENST00000527656 MSL1Q68DK7 614 aa21■□□□□ 0.95
LRP4-202ENST00000527656 SYT17Q9BSW7 474 aa21■□□□□ 0.95
LRP4-202ENST00000527656 LGR6Q9HBX8 967 aa21■□□□□ 0.95
LRP4-202ENST00000527656 CABP4P57796 275 aa20.99■□□□□ 0.95
LRP4-202ENST00000527656 NFATC2IPQ8NCF5 419 aa20.99■□□□□ 0.95
LRP4-202ENST00000527656 CHD4Q14839 1912 aa20.99■□□□□ 0.95
LRP4-202ENST00000527656 U2SURPO15042 1029 aaKnown RBP20.98■□□□□ 0.95
LRP4-202ENST00000527656 PHF14O94880 888 aa20.98■□□□□ 0.95
LRP4-202ENST00000527656 AK7Q96M32 723 aa20.98■□□□□ 0.95
LRP4-202ENST00000527656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.96■□□□□ 0.95
LRP4-202ENST00000527656 RNMTO43148 476 aaKnown RBP20.96■□□□□ 0.95
LRP4-202ENST00000527656 MSH5O43196 834 aa20.96■□□□□ 0.95
LRP4-202ENST00000527656 KIAA1551Q9HCM1 1747 aa20.95■□□□□ 0.94
LRP4-202ENST00000527656 RBM42Q9BTD8 480 aaKnown RBP20.95■□□□□ 0.94
LRP4-202ENST00000527656 RSPH6AQ9H0K4 717 aa20.95■□□□□ 0.94
LRP4-202ENST00000527656 SLC52A2Q9HAB3 445 aa20.95■□□□□ 0.94
LRP4-202ENST00000527656 KIF13BQ9NQT8 1826 aa20.94■□□□□ 0.94
LRP4-202ENST00000527656 GNPATO15228 680 aa20.94■□□□□ 0.94
LRP4-202ENST00000527656 PTCD1O75127 700 aaKnown RBP20.93■□□□□ 0.94
LRP4-202ENST00000527656 SSFA2P28290 1259 aa20.93■□□□□ 0.94
LRP4-202ENST00000527656 PHACTR3Q96KR7 559 aa20.93■□□□□ 0.94
LRP4-202ENST00000527656 POLD1P28340 1107 aa20.92■□□□□ 0.94
LRP4-202ENST00000527656 NLGN2Q8NFZ4 835 aa20.92■□□□□ 0.94
LRP4-202ENST00000527656 CNTNAP4Q9C0A0 1308 aa20.92■□□□□ 0.94
LRP4-202ENST00000527656 PRKAR2BP31323 418 aa20.91■□□□□ 0.94
LRP4-202ENST00000527656 SLC39A6Q13433 755 aa20.91■□□□□ 0.94
LRP4-202ENST00000527656 FLAD1Q8NFF5 587 aa20.91■□□□□ 0.94
LRP4-202ENST00000527656 KLHL34Q8N239 644 aa20.9■□□□□ 0.94
LRP4-202ENST00000527656 CFAP53Q96M91 514 aa20.9■□□□□ 0.94
LRP4-202ENST00000527656 IL17REQ8NFR9 667 aa20.89■□□□□ 0.93
LRP4-202ENST00000527656 CEMIPQ8WUJ3 1361 aa20.88■□□□□ 0.93
LRP4-202ENST00000527656 N4BP2Q86UW6 1770 aaPredicted RBP20.87■□□□□ 0.93
LRP4-202ENST00000527656 BRCA1P38398 1863 aaKnown RBP20.87■□□□□ 0.93
LRP4-202ENST00000527656 HMGB2P26583 209 aaKnown RBP20.86■□□□□ 0.93
LRP4-202ENST00000527656 CRKLP46109 303 aaKnown RBP20.86■□□□□ 0.93
LRP4-202ENST00000527656 RC3H1Q5TC82 1133 aaKnown RBP20.86■□□□□ 0.93
LRP4-202ENST00000527656 DNAJC10Q8IXB1 793 aa20.86■□□□□ 0.93
LRP4-202ENST00000527656 GAS2L2Q8NHY3 880 aa20.86■□□□□ 0.93
LRP4-202ENST00000527656 U2AF1L5P0DN76 240 aaPredicted RBP20.85■□□□□ 0.93
LRP4-202ENST00000527656 U2AF1Q01081 240 aaKnown RBP eCLIP20.85■□□□□ 0.93
LRP4-202ENST00000527656 AFDNP55196 1824 aaKnown RBP20.85■□□□□ 0.93
LRP4-202ENST00000527656 GNAT3A8MTJ3 354 aa20.84■□□□□ 0.93
LRP4-202ENST00000527656 DDX10Q13206 875 aaKnown RBP20.84■□□□□ 0.93
LRP4-202ENST00000527656 ARHGEF1Q92888 912 aaKnown RBP20.84■□□□□ 0.93
LRP4-202ENST00000527656 RTCBQ9Y3I0 505 aaKnown RBP20.84■□□□□ 0.93
LRP4-202ENST00000527656 KDM3BQ7LBC6 1761 aa20.84■□□□□ 0.93
LRP4-202ENST00000527656 RPS6KA4O75676 772 aa20.83■□□□□ 0.93
LRP4-202ENST00000527656 INTS5Q6P9B9 1019 aaKnown RBP20.83■□□□□ 0.93
LRP4-202ENST00000527656 NUDCQ9Y266 331 aa20.82■□□□□ 0.92
LRP4-202ENST00000527656 SCN7AQ01118 1682 aa20.82■□□□□ 0.92
LRP4-202ENST00000527656 TRAPPC3LQ5T215 181 aa20.81■□□□□ 0.92
LRP4-202ENST00000527656 LAMB4A4D0S4 1761 aa20.8■□□□□ 0.92
LRP4-202ENST00000527656 FCHSD2O94868 740 aa20.8■□□□□ 0.92
LRP4-202ENST00000527656 CYP19A1P11511 503 aaPredicted RBP20.8■□□□□ 0.92
LRP4-202ENST00000527656 GYS1P13807 737 aa20.8■□□□□ 0.92
LRP4-202ENST00000527656 ADRA2BP18089 450 aa20.8■□□□□ 0.92
LRP4-202ENST00000527656 BCORQ6W2J9 1755 aa20.8■□□□□ 0.92
LRP4-202ENST00000527656 KCNQ3O43525 872 aa20.79■□□□□ 0.92
LRP4-202ENST00000527656 YBX3P16989 372 aaKnown RBP eCLIP20.79■□□□□ 0.92
LRP4-202ENST00000527656 SRP68Q9UHB9 627 aaKnown RBP20.79■□□□□ 0.92
LRP4-202ENST00000527656 ZBTB1Q9Y2K1 713 aa20.79■□□□□ 0.92
LRP4-202ENST00000527656 SOS1Q07889 1333 aaPredicted RBP20.78■□□□□ 0.92
LRP4-202ENST00000527656 NRXN2Q9P2S2 1712 aa20.78■□□□□ 0.92
LRP4-202ENST00000527656 MMP10P09238 476 aa20.78■□□□□ 0.92
LRP4-202ENST00000527656 YY1P25490 414 aa20.78■□□□□ 0.92
LRP4-202ENST00000527656 DCTN1Q14203 1278 aa20.78■□□□□ 0.92
LRP4-202ENST00000527656 ZNF496Q96IT1 587 aaPredicted RBP20.78■□□□□ 0.92
LRP4-202ENST00000527656 PLEKHF1Q96S99 279 aa20.78■□□□□ 0.92
LRP4-202ENST00000527656 C10orf71Q711Q0 1435 aa20.78■□□□□ 0.92
LRP4-202ENST00000527656 USP42Q9H9J4 1324 aaKnown RBP20.78■□□□□ 0.92
LRP4-202ENST00000527656 HEG1Q9ULI3 1381 aa20.77■□□□□ 0.92
LRP4-202ENST00000527656 ZNF790Q6PG37 636 aa20.77■□□□□ 0.92
LRP4-202ENST00000527656 MCM10Q7L590 875 aa20.77■□□□□ 0.92
LRP4-202ENST00000527656 CCDC87Q9NVE4 849 aa20.77■□□□□ 0.92
LRP4-202ENST00000527656 CD2APQ9Y5K6 639 aa20.77■□□□□ 0.92
LRP4-202ENST00000527656 PXDNLA1KZ92 1463 aa20.76■□□□□ 0.91
LRP4-202ENST00000527656 TEFQ10587 303 aa20.76■□□□□ 0.91
LRP4-202ENST00000527656 COL15A1P39059 1388 aa20.75■□□□□ 0.91
LRP4-202ENST00000527656 DCAF8L1A6NGE4 600 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms